GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000350-TA|BGIBMGA000350-PA|undefined
         (142 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011056-1|AAR31127.1|  153|Drosophila melanogaster RE35907p pro...    93   1e-19
AE013599-1251|AAF58682.1|  153|Drosophila melanogaster CG13220-P...    93   1e-19

>BT011056-1|AAR31127.1|  153|Drosophila melanogaster RE35907p
           protein.
          Length = 153

 Score = 93.5 bits (222), Expect = 1e-19
 Identities = 38/116 (32%), Positives = 74/116 (63%), Gaps = 1/116 (0%)

Query: 1   MQGLASYTTLSVSVMNPHLMVRLFPQRDITDVLFLSAGTGAGLWLWARPHMAAAVPARRF 60
           + GL SY  L+V+VMNP ++ ++ P++D+T+V  +SA  G+  +++ RPH+      +R 
Sbjct: 33  LHGLVSYGALAVNVMNPQIVPKILPKKDLTNVFLISAVVGSAFYIYGRPHLKDVKNNKRG 92

Query: 61  SWAFLGGCLWPLGSIFLWAILRSSVGQ-RPVIGTIIGVTTGAMLTNIALDYFHYIE 115
           ++A LG  L+ +GS+  WA+++S++ Q   ++ T+ G+ TGA +  +  DY   ++
Sbjct: 93  AYALLGATLFSMGSVLAWALIKSALPQDNALLATLAGLGTGAAIVKVGTDYIQDVD 148


>AE013599-1251|AAF58682.1|  153|Drosophila melanogaster CG13220-PA
           protein.
          Length = 153

 Score = 93.5 bits (222), Expect = 1e-19
 Identities = 38/116 (32%), Positives = 74/116 (63%), Gaps = 1/116 (0%)

Query: 1   MQGLASYTTLSVSVMNPHLMVRLFPQRDITDVLFLSAGTGAGLWLWARPHMAAAVPARRF 60
           + GL SY  L+V+VMNP ++ ++ P++D+T+V  +SA  G+  +++ RPH+      +R 
Sbjct: 33  LHGLVSYGALAVNVMNPQIVPKILPKKDLTNVFLISAVVGSAFYIYGRPHLKDVKNNKRG 92

Query: 61  SWAFLGGCLWPLGSIFLWAILRSSVGQ-RPVIGTIIGVTTGAMLTNIALDYFHYIE 115
           ++A LG  L+ +GS+  WA+++S++ Q   ++ T+ G+ TGA +  +  DY   ++
Sbjct: 93  AYALLGATLFSMGSVLAWALIKSALPQDNALLATLAGLGTGAAIVKVGTDYIQDVD 148


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.326    0.141    0.461 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,220,986
Number of Sequences: 52641
Number of extensions: 280482
Number of successful extensions: 570
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 566
Number of HSP's gapped (non-prelim): 2
length of query: 142
length of database: 24,830,863
effective HSP length: 78
effective length of query: 64
effective length of database: 20,724,865
effective search space: 1326391360
effective search space used: 1326391360
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 57 (27.1 bits)