GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000349-TA|BGIBMGA000349-PA|IPR000905|Peptidase M22,
glycoprotease, IPR009180|Peptidase M22, O-sialoglycoprotein
endopeptidase
         (408 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   3.0  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   5.2  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 347 CTDNGIMIAWNGLEKWRKNLDIMTNFNTLDLE 378
           C  +G  + W G    RK     + F TL+LE
Sbjct: 228 CGTSGNPLEWTGQVTVRKKRKPYSKFQTLELE 259


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 63  LRNGGIIPDVAQDLHRKYIEPTVTETLLKANLLMKDISAIAVTVKPGLPLS 113
           +RN  II  +  D+ R  +        ++ N+L+K++   +   KPG P S
Sbjct: 646 VRNTSIIK-IPFDVFRNMLPVRNVSVDVRDNILLKNLQNPSTGSKPGKPRS 695


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.135    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,530
Number of Sequences: 317
Number of extensions: 3450
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 2
length of query: 408
length of database: 114,650
effective HSP length: 58
effective length of query: 350
effective length of database: 96,264
effective search space: 33692400
effective search space used: 33692400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)