Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000349-TA|BGIBMGA000349-PA|IPR000905|Peptidase M22,
glycoprotease, IPR009180|Peptidase M22, O-sialoglycoprotein
endopeptidase
(408 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0360 - 17966857-17966865,17966866-17966954,17967276-179673... 170 2e-42
05_02_0025 - 5710833-5711234,5711373-5711528,5714615-5715382 92 6e-19
01_02_0069 - 10813467-10813475,10813476-10813564,10813865-108139... 59 7e-09
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242... 34 0.24
11_02_0083 - 8116997-8117590,8118342-8118745,8119073-8119671,812... 31 2.2
04_02_0009 + 8476600-8477125,8478711-8478730 29 5.1
02_03_0205 - 16411707-16412759,16413077-16413256,16413960-164144... 29 5.1
>12_02_0360 -
17966857-17966865,17966866-17966954,17967276-17967399,
17967639-17967717,17968267-17968352,17968471-17968661,
17970496-17970560,17971192-17971282,17971705-17971801,
17971883-17972128,17972248-17972505
Length = 444
Score = 170 bits (413), Expect = 2e-42
Identities = 117/304 (38%), Positives = 163/304 (53%), Gaps = 35/304 (11%)
Query: 63 LRNGGIIPDVAQDLHRKYIEPTVTETLLKANLLMKDISAIAVTVKPGLPLSLAVGMKYAK 122
+R GG+ P +A++ H I+ V + L AN+ D+SA+AVTV PGL L L VG+ A+
Sbjct: 148 VRWGGVAPKMAEEAHSLAIDQVVQKALDDANVSENDLSAVAVTVGPGLSLCLRVGVHKAR 207
Query: 123 HLARVNAKPIIPIHHMEAHALT-----VRM-EHNVNFPYLVLLISGGHCLLAVVQNINKF 176
+A+ PI+ +HHMEAHAL VR+ +++FP+L LLISGGH LL + + ++
Sbjct: 208 KIAKSFRLPIVGVHHMEAHALVSSSIDVRLVNKDLDFPFLALLISGGHNLLVLAHGLGQY 267
Query: 177 LLLGKSIDMAPGELFDKIARRMKLRNVPELSTMCGGQAVETAALRATNPEMFNLPIPLVQ 236
+ LG +ID A GE +DK AR + L GG A+E AL +P +P+ Q
Sbjct: 268 VQLGTTIDDAIGEAYDKSARWLGLD-----MRKGGGPALEQLALEG-DPNAVKFSVPMRQ 321
Query: 237 VKDCNFSFNGLKTSVLYHLRKKEKEHKVVADALIPEISNLCCAALIATTKHLVHRTQRAM 296
KDCNFS+ GLKT V + E + ++ IP + + TK R RA
Sbjct: 322 HKDCNFSYAGLKTQVRLAI-----ESRNISTDDIP---------ISSATKD--DRQIRA- 364
Query: 297 QFCSINNLIPENNKRLVVSGGVACNNYIFNALKAASVDYGYNVYRPSMKLCTDNGIMIAW 356
N+ VVSGGVA N Y+ L + G + P KLCTDNG+MIAW
Sbjct: 365 ------NIAASFQLLKVVSGGVASNQYVRTHLNQIAEKNGLQLVCPPPKLCTDNGVMIAW 418
Query: 357 NGLE 360
G+E
Sbjct: 419 TGIE 422
>05_02_0025 - 5710833-5711234,5711373-5711528,5714615-5715382
Length = 441
Score = 92.3 bits (219), Expect = 6e-19
Identities = 76/293 (25%), Positives = 137/293 (46%), Gaps = 27/293 (9%)
Query: 67 GIIPDVAQDLHRKYIEPTVTETLLKANLLMKDISAIAVTVKPGLPLSLAVGMKYAKHLAR 126
G +P H ++ P + L +A + D++ + T PG+ L V A+ L+
Sbjct: 113 GFLPRETAHHHLAHLLPLLRAALGEAGVTPADLACVCYTKGPGMGAPLQVAAAAARALSL 172
Query: 127 VNAKPIIPIHHMEAHALTVRMEHNVNFPYLVLLISGGHCLLAVVQNINKFLLLGKSIDMA 186
+ KP++ ++H AH R P +VL +SGG+ + + + ++ + G++ID+A
Sbjct: 173 LWGKPLVGVNHCVAHVEMGRAVTGAVDP-VVLYVSGGNTQV-IAYSEGRYRIFGETIDIA 230
Query: 187 PGELFDKIARRMKLRNVPELSTMCGGQAVETAALRATNPEMFNLPIPLVQVKDCNFSFNG 246
G D+ AR ++L N P G +E A + E F + +P V VK + SF+G
Sbjct: 231 VGNCLDRFARVLELSNDPS-----PGYNIEQLAKKG---EKF-IDLPYV-VKGMDVSFSG 280
Query: 247 LKTSVLYHLRKKEKEHKVVADALIPEISNLCCAALIATTKHLVHRTQRAMQFCSINNLIP 306
+ + + +K K ++ ++LC + LV T+RAM C
Sbjct: 281 ILSFIEATAIEKLKNNECTP-------ADLCYSLQETLFAMLVEITERAMAHC------- 326
Query: 307 ENNKRLVVSGGVACNNYIFNALKAASVDYGYNVYRPSMKLCTDNGIMIAWNGL 359
++K +++ GGV CN + ++ + G ++ + C DNG MIA+ GL
Sbjct: 327 -DSKDVLIVGGVGCNERLQEMMRIMCSERGGRLFATDDRYCIDNGAMIAYTGL 378
>01_02_0069 -
10813467-10813475,10813476-10813564,10813865-10813988,
10814227-10814305,10815298-10815388,10815808-10815904,
10816197-10816241,10816369-10816464
Length = 209
Score = 58.8 bits (136), Expect = 7e-09
Identities = 30/67 (44%), Positives = 42/67 (62%)
Query: 85 VTETLLKANLLMKDISAIAVTVKPGLPLSLAVGMKYAKHLARVNAKPIIPIHHMEAHALT 144
V + L AN+ D+SA+AVTV PGL L L VG+ A+ +A+ PI+ +HHMEA AL
Sbjct: 49 VQKALDNANVSESDLSAVAVTVGPGLSLCLRVGVHKARKIAKSFHLPIVGVHHMEAQALV 108
Query: 145 VRMEHNV 151
R ++
Sbjct: 109 SRSTDDI 115
Score = 54.0 bits (124), Expect = 2e-07
Identities = 24/48 (50%), Positives = 30/48 (62%)
Query: 313 VVSGGVACNNYIFNALKAASVDYGYNVYRPSMKLCTDNGIMIAWNGLE 360
VVSGGVA N Y+ L + G + P +LCTDNG+MIAW G+E
Sbjct: 140 VVSGGVASNQYVRTHLNQIAEKNGLQLVCPPPRLCTDNGVMIAWTGIE 187
>02_05_0473 +
29319824-29322511,29322659-29322820,29324133-29324249,
29324360-29324469,29324504-29324540,29324696-29324862,
29325002-29325089,29325163-29325270
Length = 1158
Score = 33.9 bits (74), Expect = 0.24
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 306 PENNKRLVVSGGVACNNYIFNALKAASVDYGYNVYRPSMKLCTDNGIMIAWN 357
P N L ++ V C + ALKA N++ + KLC+D GI I W+
Sbjct: 720 PSNLDILSIARSVCCKTSLRAALKAKYGILPDNIFVKAAKLCSDVGIQIDWH 771
>11_02_0083 -
8116997-8117590,8118342-8118745,8119073-8119671,
8120226-8120266
Length = 545
Score = 30.7 bits (66), Expect = 2.2
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 164 HCLLAVVQNINKFLLLGKSIDMAPGELFDKIARRMKLRNVPELSTMCGGQAVETAALRAT 223
HC A + N + L +++ E + I R +LR + + GQ A+R
Sbjct: 246 HCPDAPYCDRNGWTCLHEAVKEGQTEFVEFILRTPQLRKLINMRNNKDGQTALHQAVRMC 305
Query: 224 NPEMFNLPIPLVQVKDCNFSFNGLKT--SVLYHL 255
NP+ + L+ KD +F+ N KT SV++ L
Sbjct: 306 NPK---IVASLLSHKDTDFTLNDHKTGQSVIWQL 336
>04_02_0009 + 8476600-8477125,8478711-8478730
Length = 181
Score = 29.5 bits (63), Expect = 5.1
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Query: 291 RTQRAMQFCSINNLIPENNK--RLVVSGGVACNNYIFNALKA-ASVDYGYNVYRPSMKL- 346
R +RA+ F +L E NK R + +GG F ++ A+V G + R +
Sbjct: 88 RLRRALNFLFHTDLSTETNKTRREISAGGSGSGGDAFERRRSPAAVARGRRLRRQQRRRP 147
Query: 347 ---CTDNGIMIAWNGLEKWRKNL 366
CTD +A G +WR+ L
Sbjct: 148 TRRCTDPTAALAGGGRGRWRRRL 170
>02_03_0205 -
16411707-16412759,16413077-16413256,16413960-16414498,
16414798-16414825
Length = 599
Score = 29.5 bits (63), Expect = 5.1
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 343 SMKLCTDNGIMIAWNGLEKWRKNLD--IMTNFNTLDLEATSQLGESLIDQV 391
++K C D + + +WR +LD +M LDLE TS L + +DQ+
Sbjct: 281 ALKQCADLTHVRSVTVFGEWRSSLDFSMMRMLRILDLEGTSGLKDDDLDQI 331
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.322 0.135 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,815,152
Number of Sequences: 37544
Number of extensions: 417195
Number of successful extensions: 901
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 890
Number of HSP's gapped (non-prelim): 11
length of query: 408
length of database: 14,793,348
effective HSP length: 84
effective length of query: 324
effective length of database: 11,639,652
effective search space: 3771247248
effective search space used: 3771247248
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)
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