Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000349-TA|BGIBMGA000349-PA|IPR000905|Peptidase M22,
glycoprotease, IPR009180|Peptidase M22, O-sialoglycoprotein
endopeptidase
(408 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81030-8|CAB02716.1| 421|Caenorhabditis elegans Hypothetical pr... 194 1e-49
AC024859-27|AAK29978.4| 337|Caenorhabditis elegans Hypothetical... 93 3e-19
Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical pr... 29 4.5
U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein. 29 4.5
AF016427-3|AAB65356.1| 730|Caenorhabditis elegans Yeast mcm (li... 29 6.0
AC006776-6|AAF60624.1| 356|Caenorhabditis elegans Serpentine re... 29 7.9
>Z81030-8|CAB02716.1| 421|Caenorhabditis elegans Hypothetical
protein C01G10.10 protein.
Length = 421
Score = 194 bits (472), Expect = 1e-49
Identities = 117/336 (34%), Positives = 176/336 (52%), Gaps = 12/336 (3%)
Query: 26 STLIFGIETSCDDTGCXXXXXXXXXXXXSLKSQNLVHLRNGGIIPDVAQDLHRKYIEPTV 85
S + GIETSCDDT ++ + + GGI P V HR+ + +
Sbjct: 22 SVKVLGIETSCDDTAVAIVNEKREILSSERYTERAIQRQQGGINPSVCALQHRENLPRLI 81
Query: 86 TETLLKANLLMKDISAIAVTVKPGLPLSLAVGMKYAKHLARVNAKPIIPIHHMEAHALTV 145
+ L A KD+ A+AVTV PGL ++L G+ A A+ + P+IP+HHM AHAL++
Sbjct: 82 EKCLNDAGTSPKDLDAVAVTVTPGLVIALKEGISAAIGFAKKHRLPLIPVHHMRAHALSI 141
Query: 146 RM-EHNVNFPYLVLLISGGHCLLAVVQNINKFLLLGKSIDMAPGELFDKIARRMKLRNVP 204
+ + +V FP+ +L+SGGH L++V +++ KF L G+S+ +PGE DK+AR++
Sbjct: 142 LLVDDSVRFPFSAVLLSGGHALISVAEDVEKFKLYGQSVSGSPGECIDKVARQLGDLG-S 200
Query: 205 ELSTMCGGQAVETAALRATNPEMFNLPIPLVQVKDCNFSFNGLKTSVLYHLRKKEKEHKV 264
E + G AVE A RA+ PI L V N +F+ +K S L L + K +
Sbjct: 201 EFDGIHVGAAVEILASRASADGHLRYPIFLPNVPKANMNFDQIKGSYLNLLERLRKNSET 260
Query: 265 VADALIPEISNLCCAALIAT-TKHLVHRTQRAMQFCSINNLIPENNKRLVVSGGVACNNY 323
D IP+ CA+L T +H+ + + S +P K+LV+ GGVA N Y
Sbjct: 261 SID--IPDF----CASLQNTVARHISSKLHIFFESLSEQEKLP---KQLVIGGGVAANQY 311
Query: 324 IFNALKAASVDYGYNVYRPSMKLCTDNGIMIAWNGL 359
IF A+ S + + + LCTDN MIA++GL
Sbjct: 312 IFGAISKLSAAHNVTTIKVLLSLCTDNAEMIAYSGL 347
>AC024859-27|AAK29978.4| 337|Caenorhabditis elegans Hypothetical
protein Y71H2AM.1 protein.
Length = 337
Score = 93.1 bits (221), Expect = 3e-19
Identities = 83/294 (28%), Positives = 132/294 (44%), Gaps = 29/294 (9%)
Query: 67 GIIPDVAQDLHRKYIEPTVTETLLKANLLMKD--ISAIAVTVKPGLPLSLAVGMKYAKHL 124
G P HR+ I V E + AN+ + I IA T PG+ L VG A+ L
Sbjct: 39 GFRPTETAQHHRQQIVRLVGEAIKLANIQNPELEIDGIAYTKGPGMGAPLQVGAIVARTL 98
Query: 125 ARVNAKPIIPIHHMEAHALTVRMEHNVNFPYLVLLISGGHCLLAVVQNINKFLLLGKSID 184
+ KPIIP++H H R+ + P +VL +SGG+ + + ++ + G++ID
Sbjct: 99 SLTWKKPIIPVNHCVGHIEMGRLITGADNP-VVLYVSGGNTQV-ISYTKKRYRIFGETID 156
Query: 185 MAPGELFDKIARRMKLRNVPELSTMCGGQAVETAALRATNPEMFNLPIPLVQVKDCNFSF 244
+A G D+ AR +KL N P G +E A ++ LP VK + S
Sbjct: 157 IAVGNCLDRFARVLKLPNAPS-----PGYNIEQLA--KNGKKLMELPY---SVKGMDVSL 206
Query: 245 NGLKTSVLYHLRKKEKEHKVVADALIPEISNLCCAALIATTKHLVHRTQRAMQFCSINNL 304
+G+ + + +K+ + + PE +LC + L+ T+RAM S
Sbjct: 207 SGILSLI-----EKKAPKLIESGDFTPE--DLCFSLQETVFAMLIEITERAMAHTS---- 255
Query: 305 IPENNKRLVVSGGVACNNYIFNALKAASVDYGYNVYRPSMKLCTDNGIMIAWNG 358
+K L++ GGV CN + A + G +++ + C DNG MIA G
Sbjct: 256 ----SKELLIVGGVGCNLRLQEMASAMCAERGAHLFATDERFCIDNGAMIARAG 305
>Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical
protein C25G4.5 protein.
Length = 1263
Score = 29.5 bits (63), Expect = 4.5
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 358 GLEKWRKNLDIMTNFNTLDL----EATSQLGESLIDQVAS 393
G+E W K D TN++ + + EA SQL E+ ID+ S
Sbjct: 527 GIEGWIKATDAWTNYDVVKMNVNREARSQLDENAIDEQES 566
>U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein.
Length = 1263
Score = 29.5 bits (63), Expect = 4.5
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 358 GLEKWRKNLDIMTNFNTLDL----EATSQLGESLIDQVAS 393
G+E W K D TN++ + + EA SQL E+ ID+ S
Sbjct: 527 GIEGWIKATDAWTNYDVVKMNVNREARSQLDENAIDEQES 566
>AF016427-3|AAB65356.1| 730|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 7 protein.
Length = 730
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 239 DCNFSFNGLKTSVLYHLRKKEKEHKVVADALIPEI 273
D N +FNG++++ L LR+K ++ +A ++ PEI
Sbjct: 319 DDNPTFNGVQSAELEVLRRKGDNYETLAASIAPEI 353
>AC006776-6|AAF60624.1| 356|Caenorhabditis elegans Serpentine
receptor, class w protein99 protein.
Length = 356
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 275 NLCCAALIATTKHLVHRTQRAMQFCSINNLI 305
+LCC ALI HL+ T+++M+ S N ++
Sbjct: 27 SLCCFALIINLLHLIVLTRKSMRTTSTNVIL 57
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.135 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,352,638
Number of Sequences: 27539
Number of extensions: 367485
Number of successful extensions: 815
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 807
Number of HSP's gapped (non-prelim): 6
length of query: 408
length of database: 12,573,161
effective HSP length: 83
effective length of query: 325
effective length of database: 10,287,424
effective search space: 3343412800
effective search space used: 3343412800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)
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