Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000348-TA|BGIBMGA000348-PA|IPR000618|Insect cuticle
protein
(275 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0904 + 20717005-20718087 37 0.015
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 36 0.027
07_03_1433 + 26513728-26514135,26525534-26526280 34 0.11
01_07_0078 - 40923115-40924016,40924341-40924416,40924686-40924718 33 0.25
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 32 0.44
05_05_0230 - 23476919-23477372,23477656-23477695,23478578-234787... 30 1.8
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 30 1.8
11_06_0578 + 25176304-25176388,25176503-25177032,25177267-251779... 30 2.3
11_04_0331 + 16456577-16456579,16456664-16456911,16457625-164578... 30 2.3
06_03_1513 - 30692833-30693258,30693365-30693541,30693807-306938... 30 2.3
09_03_0089 + 12265916-12267232 29 3.1
07_01_0549 + 4082672-4082731,4083424-4083489,4083628-4083674,408... 29 3.1
05_02_0028 - 5764980-5766374 29 3.1
03_05_0781 + 27654764-27655429,27655902-27656004,27656535-276565... 29 3.1
07_03_1432 - 26508135-26508881,26509301-26509708 29 4.1
03_06_0313 + 33073542-33074464,33074901-33075069 29 4.1
02_03_0121 + 15468894-15468906,15469008-15469193,15474157-154746... 29 4.1
11_05_0050 + 18665251-18665613,18667280-18667744,18668548-186690... 29 5.4
05_03_0458 + 14280953-14281866,14281964-14282912 29 5.4
01_07_0096 - 41059668-41059886,41059978-41060154,41060575-410607... 29 5.4
01_01_0650 - 4948852-4950012 29 5.4
05_04_0031 + 17353292-17354353 28 7.1
02_05_1351 - 35855543-35856751 28 7.1
11_01_0342 + 2548147-2548275,2548385-2548425,2548521-2548570,254... 28 9.4
07_03_1762 - 29299328-29299437,29299782-29299871,29300487-293012... 28 9.4
01_07_0160 - 41563109-41563468,41563566-41563985,41564082-415642... 28 9.4
01_06_1682 - 39130696-39131705,39132355-39132583 28 9.4
>04_03_0904 + 20717005-20718087
Length = 360
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 81 PHFSSSDVTITPAPPTFS-HPSSTPRVFVSPNSIDSSTAYDYRPTVTSVTDRDATTPNPY 139
P + + T TP PPT+ P TP P + T Y PT S + TP PY
Sbjct: 130 PKPTPAPYTPTPTPPTYKPQPKPTPPPTYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTPY 189
Query: 140 AYEP 143
P
Sbjct: 190 TPTP 193
Score = 27.9 bits (59), Expect = 9.4
Identities = 20/64 (31%), Positives = 24/64 (37%), Gaps = 4/64 (6%)
Query: 80 PPHFSSSDVTITPAPPTFSHPSSTPRVFVSPNSIDSSTAYDYRPTVTSVTDRDATTPNPY 139
PP TP P T P+ TP + P + T Y PT S + TP PY
Sbjct: 154 PPPTYKPQPKPTPTPYT---PTPTPPSY-KPQPKPTPTPYTPTPTPPSYKPQPKPTPTPY 209
Query: 140 AYEP 143
P
Sbjct: 210 TPTP 213
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 81 PHFSSSDVTITPAPPTFSHPSSTPRVFVSPNSIDSSTAYDYRPTVTSVTDRDATTPNPYA 140
P++S + T +P P++S PS + SP + + DY PT + + + +P
Sbjct: 1774 PNYSPTSPTYSPTSPSYSQPSPSYSP-TSPYTTSGGPSPDYSPTSPNYSPSGSYSPTAPG 1832
Query: 141 YEPPNT 146
Y P +T
Sbjct: 1833 YSPSST 1838
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 81 PHFSSSDVTITPAPPTFSHPSSTPRVFVSPNSIDSSTAYDYRPTVTSVTDRDAT-TPNPY 139
P +S + + TP PT+S P+S SP+ S T+ Y PT S + + +P
Sbjct: 1576 PSYSPTSPSYTPGSPTYS-PTSPSYSPTSPSY--SPTSPSYSPTSPSYSPTSPSYSPTSP 1632
Query: 140 AYEPPNTN-SLDDGYYASDSQRYDVFNP 166
+Y P + + S Y+ S Y +P
Sbjct: 1633 SYSPTSPSYSPTSPVYSPTSPAYSPTSP 1660
>07_03_1433 + 26513728-26514135,26525534-26526280
Length = 384
Score = 34.3 bits (75), Expect = 0.11
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 86 SDVTITPA-PPTFSHPSSTPRVFVSPNSIDSSTAYDYRPTVTSVTDRDATTPNPYAYEP- 143
S +++P+ PPT+ PSSTP SP + S Y P T T PNP P
Sbjct: 36 SPPSLSPSMPPTYPPPSSTP---PSPAPVSPSPPTTYPPPST-------TPPNPAPTSPS 85
Query: 144 PNTNSLDDGYYASDSQRYDVFNPNSYRHA 172
P L GYY+S + + ++ ++A
Sbjct: 86 PPAPGLRVGYYSSSCPKAEQIVKDTVKNA 114
>01_07_0078 - 40923115-40924016,40924341-40924416,40924686-40924718
Length = 336
Score = 33.1 bits (72), Expect = 0.25
Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 81 PHFSSSDVTITPAPPTFSHPSSTPRVFVSPNS-IDSSTAYDYRPTVTSVTDRDATTPNPY 139
P S++ PAP S P R S ID + Y + P+PY
Sbjct: 231 PTASAAYYAAPPAPAPMSMPMPMARPGPSSQGYIDEEYSPSYYNRSSPYEPYYYPQPSPY 290
Query: 140 AYEPPNTNSLDDGYYASDSQRYDVFNP 166
Y+ +S DD YY + QR F+P
Sbjct: 291 RYQHYQQSSADDYYYGAPQQR-SAFSP 316
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 32.3 bits (70), Expect = 0.44
Identities = 31/128 (24%), Positives = 45/128 (35%), Gaps = 7/128 (5%)
Query: 80 PPHFSS--SDVTITPAPPTFSHPSSTPRVFVSPNSI----DSSTAYDYRPTVTSVTDRDA 133
PP + S ITP+PP + S P V SP I P +T
Sbjct: 583 PPEITPYPSPPEITPSPPEITPYPSPPEVVPSPPKITPYPSPPEVTPSPPEITPYPSPPD 642
Query: 134 TTPNPYAYEP-PNTNSLDDGYYASDSQRYDVFNPNSYRHADDWLRRQRPTAEIGDGYTPQ 192
P+P +YEP P + YA + Y + P + ++ Y PQ
Sbjct: 643 IVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQ 702
Query: 193 FSTYDGAP 200
+Y +P
Sbjct: 703 PPSYVPSP 710
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 5/64 (7%)
Query: 80 PPHFSSSDVTITPAPPTFSHPSSTPRVFVSPNSIDSSTAYDYRPTVTSVTDRDATTPNPY 139
PP + S +TP PP +P S P V SP I T Y P VT P+P
Sbjct: 539 PPEIAPSPPIVTPMPPII-YP-SPPEVTPSPPEI---TPYPSPPEVTPGPPEITPYPSPP 593
Query: 140 AYEP 143
P
Sbjct: 594 EITP 597
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Query: 80 PPHFSSSDVTITPAPPTFSHPSSTPRVFVSPNSIDSSTAYDYRPTVTSVTDRDATTPNP 138
PP S +TP+PP + S P V P I T Y P +T P+P
Sbjct: 553 PPIIYPSPPEVTPSPPEITPYPSPPEVTPGPPEI---TPYPSPPEITPSPPEITPYPSP 608
>05_05_0230 -
23476919-23477372,23477656-23477695,23478578-23478700,
23479114-23479151,23479289-23479674,23479875-23481053,
23481805-23481928,23482733-23482779
Length = 796
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 81 PHFSSSDVTITPAPPTFSHPSSTPRVFVSPNSIDSSTAYDYRPTVTSVTDRDATTPNPYA 140
P SS+ V P+ PT + PS+ R + NS S A TS + +TP +
Sbjct: 134 PARSSTPVKTRPSTPTKTRPSTPVRTRQTANSTSDSAA----ARTTSAQNSRPSTPTSRS 189
Query: 141 YEPPNTNS 148
PN++S
Sbjct: 190 RAMPNSSS 197
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 9/91 (9%)
Query: 81 PHFSSSDVTITPAPPTFSHPSST---PRVFVSPNSID-SSTAYDYRPTVTSVTDRDATTP 136
P +S + + +P P++S SS SP S S T+ Y P+ S
Sbjct: 1757 PSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYT 1816
Query: 137 NPYAYEPPNTNSLDDGYYASDSQRYDVFNPN 167
+AY P + N YY+S S Y +P+
Sbjct: 1817 PSHAYSPSSPN-----YYSSTSPTYSPTSPS 1842
Score = 29.1 bits (62), Expect = 4.1
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 89 TITPAPPTFSHPSSTPRVFVSPNSIDSSTAYDYRPT--VTSVTDRDATTPNPYAYEP--P 144
T P PT S+T ++ + I S T+ Y PT V S T P AY P P
Sbjct: 1637 TSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTS-PVYNPTSSAYSPTSP 1695
Query: 145 NTNSLDDGY-YASDSQRYDVFNPNSYRHA 172
+ N Y Y+ S Y +P SY ++
Sbjct: 1696 SYNPTSPSYSYSPTSPSYSPTSP-SYSYS 1723
>11_06_0578 +
25176304-25176388,25176503-25177032,25177267-25177997,
25178122-25178172,25178562-25178813,25178894-25179004,
25179102-25179183,25179460-25179489
Length = 623
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/50 (32%), Positives = 22/50 (44%)
Query: 80 PPHFSSSDVTITPAPPTFSHPSSTPRVFVSPNSIDSSTAYDYRPTVTSVT 129
PP S T+ P + P+S P+ SP S SS+ Y P + T
Sbjct: 394 PPPSPSQQPTLPAPQPVQASPTSPPKQHASPGSALSSSLSTYTPICSGRT 443
>11_04_0331 +
16456577-16456579,16456664-16456911,16457625-16457812,
16458293-16458489,16458579-16458768,16458865-16459084,
16459169-16459376,16459508-16459642,16459725-16459916,
16459999-16460171,16460266-16460454,16460539-16460655,
16460734-16460818,16460900-16461052,16461135-16461260,
16461391-16461573,16461823-16461984,16462098-16462214
Length = 961
Score = 29.9 bits (64), Expect = 2.3
Identities = 31/96 (32%), Positives = 41/96 (42%), Gaps = 13/96 (13%)
Query: 84 SSSDVTITPAPPTFSHPSSTPRVFVSPNSIDSSTAYDYRPTVTSVTDRDATTPNPYAYEP 143
S ++ TP P F ST R + PN+ S A D P+ S D D A
Sbjct: 4 SENNAPSTPGSPGF----STDR--LPPNTTTSRGATD--PSSYSDDDDDDVVGAEEAEVD 55
Query: 144 PNTNSLDDGYYASDSQR--YDVFNPN---SYRHADD 174
PN DDG A++ + D+FN N YR D+
Sbjct: 56 PNVLPEDDGVVAAEEEEDGEDLFNDNYLDDYRRMDE 91
>06_03_1513 -
30692833-30693258,30693365-30693541,30693807-30693818,
30693988-30694033,30695070-30695365
Length = 318
Score = 29.9 bits (64), Expect = 2.3
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 12/88 (13%)
Query: 97 FSHPSSTPRVFVSPNSIDSSTAYDYRPTVTSVTDRDATTPNPYAYEP--------PNTN- 147
F P+++P SP DS +D + D +P PYA+ P P N
Sbjct: 5 FDSPTASPAA--SPFDDDSFLRFDAAAPAPAPADAFPPSPEPYAFRPDAPSPFGMPEANG 62
Query: 148 SL-DDGYYASDSQRYDVFNPNSYRHADD 174
SL DD + A D+ V P + AD+
Sbjct: 63 SLHDDPFAAPDNDNGPVLPPPNQMGADE 90
>09_03_0089 + 12265916-12267232
Length = 438
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 91 TPAPPTFSHPSSTPRVFVSPNSIDSSTAYDYRPTVTSVTDRDATTPNPYA 140
+P PP S SSTP +P+S + + A T ++ AT+ NP A
Sbjct: 228 SPFPPYTSSSSSTPLSTSTPSSSNLAAANANATTTSTAAATTATSVNPTA 277
>07_01_0549 +
4082672-4082731,4083424-4083489,4083628-4083674,
4083757-4083802,4083905-4083985,4084105-4084147,
4084258-4084307,4084392-4084473,4084538-4084587,
4084687-4084760,4084870-4084921,4085034-4085459,
4085816-4086403
Length = 554
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 82 HFSSSDVTITPAPPTFSHPSSTPRVFVSPNSIDSSTAYDYRPTVTSVTDRDATTPNPYAY 141
H + S VT +PAP T SSTPR+ + P+ + A + P+ S+ A+ P A
Sbjct: 322 HGNHSRVTKSPAP-TPRRASSTPRIRLEPSKTFHARAAETPPSKCSL--ERASQPTRRAS 378
Query: 142 EPPN 145
P N
Sbjct: 379 TPVN 382
>05_02_0028 - 5764980-5766374
Length = 464
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 186 GDGYTPQFSTYDGAPFRRNGFRYYLPK 212
G +P +YDG+P RR F YL K
Sbjct: 263 GAAASPLAESYDGSPLRRQAFESYLTK 289
>03_05_0781 +
27654764-27655429,27655902-27656004,27656535-27656590,
27656895-27657059,27657078-27657083,27657657-27657770,
27658170-27658262
Length = 400
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 80 PPHFSSSDVTITPAPPT-FSHPSSTPRVFVSPNSID 114
PP S V + APP SHP + RV VSP +++
Sbjct: 40 PPFPSRRGVAVAVAPPLRASHPDTARRVSVSPAAVE 75
>07_03_1432 - 26508135-26508881,26509301-26509708
Length = 384
Score = 29.1 bits (62), Expect = 4.1
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 86 SDVTITPA-PPTFSHPSSTPRVFVSPNSIDSSTAYDYRPTVTSVTDRDATTPNPYAYEPP 144
S +++P+ PPT+ PSSTP ++P S T Y P+ T +P P + PP
Sbjct: 36 SPPSLSPSTPPTYPPPSSTP-PSLAPVSPSPPTTY-LPPSPT------PPSPAPASPSPP 87
Query: 145 NTNSLDDGYYASDSQRYDVFNPNSYRHA 172
+ L GYY+S + + ++ ++A
Sbjct: 88 SL-GLRVGYYSSSCPKAEQIVKDTVKNA 114
>03_06_0313 + 33073542-33074464,33074901-33075069
Length = 363
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 82 HFSSSDVTITPAPPTFSHPSSTPRVFVSPNSIDSSTAYDYRPTVTSVTDRDATTP 136
HFSSS T +P+P T + SS V+P +D S + T+ + R A P
Sbjct: 89 HFSSSAATASPSPATAAAASSAAN--VTPAVVDRSLFLE--TTLLDLNSRGAPAP 139
>02_03_0121 +
15468894-15468906,15469008-15469193,15474157-15474650,
15475090-15475521,15475597-15475821,15476065-15476346,
15476432-15476704,15477680-15477805,15481010-15481288,
15481313-15481588,15481670-15482113,15482200-15482397,
15482574-15482732,15482832-15483085,15483164-15483316,
15483395-15483683,15483769-15483807,15483913-15483951
Length = 1386
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 2/97 (2%)
Query: 50 VTRAPAVQRNRGPPRFXXXXXXXXXXXXIEPPHFSSSDVTITPAPPTFSHPSSTPRVFVS 109
V PA PP EP S+ T +PA P + TP
Sbjct: 87 VATEPAAAATEPPPPSIRTAAASSPTTPTEPTAASTEHATASPAQPPLT--PVTPSTEPG 144
Query: 110 PNSIDSSTAYDYRPTVTSVTDRDATTPNPYAYEPPNT 146
+I+++ A + +S+ + +A P A P T
Sbjct: 145 AAAIEAAAAANSSFADSSLAEPEAAATEPTASTEPRT 181
>11_05_0050 +
18665251-18665613,18667280-18667744,18668548-18669037,
18669115-18669143
Length = 448
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 86 SDVTITPAPPTFSHPSSTPRVFVSPNS 112
+D+ P P SHP P VF SP S
Sbjct: 132 ADICPNPQPAYMSHPKPNPHVFSSPCS 158
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 28.7 bits (61), Expect = 5.4
Identities = 31/111 (27%), Positives = 40/111 (36%), Gaps = 16/111 (14%)
Query: 41 TAPTDSGYGVTRAPAVQRNRGPPRFXXXXXXXXXXXXIEPPHFSSSDVTITPAPPTFSHP 100
TA S YG T P+ RN P SS+ T+ P+ T S P
Sbjct: 10 TASASSSYGPTSPPSSCRNAAPSPPSSNSTPT-----------SSTTPTVPPSLTTTSSP 58
Query: 101 SSTPRVFVSPNSID--SSTAYDYRPTVTSVTDRDATTPNPYAYEPPNTNSL 149
SS+P SP + T PT S + P P P+ +SL
Sbjct: 59 SSSPS---SPPPLPPLQPTPPPLPPTTLSCSSHPTPPPPPSPTTSPSASSL 106
>01_07_0096 -
41059668-41059886,41059978-41060154,41060575-41060778,
41060874-41061089,41061698-41061961,41062413-41062654,
41062728-41062851,41062852-41062991,41063349-41063397,
41063735-41063891,41063982-41064130,41064267-41064299,
41064497-41064575,41064961-41065040,41065438-41065560
Length = 751
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 174 DWLRRQRPTAEIGDGYTPQ---FSTYDGAPFRRNGFRYYLPKQYHEENTGDVNDRIGSFG 230
D+LRR E G+ Y+ + + YDGAP +R G Y + E+ G+ ++ +
Sbjct: 350 DYLRRDM-IGEEGEIYSAEDADSAEYDGAPRKREGAFYVWTNKEIEDTLGENSELFKNHY 408
Query: 231 YVDPFG 236
YV G
Sbjct: 409 YVKSSG 414
>01_01_0650 - 4948852-4950012
Length = 386
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 190 TPQFSTYDGAPFRRNGFRYYLPK 212
+P +YDG+P RR F YL K
Sbjct: 193 SPLAESYDGSPLRRQAFESYLTK 215
>05_04_0031 + 17353292-17354353
Length = 353
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 85 SSDVTITPAPPTFSHPSSTPRVFVSP--NSIDSSTAYDYRPTVTSVTDRDATTPNPYA 140
+S T PAPP S SS + + TAYD P+ + A TP P A
Sbjct: 147 ASTATSAPAPPPDSSSSSAAAATTWSLYDDLYLDTAYDCSPSEAAQISNTAATPAPAA 204
>02_05_1351 - 35855543-35856751
Length = 402
Score = 28.3 bits (60), Expect = 7.1
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 78 IEPPHFSSSDVTITPAPPTFSHP-SSTPRVFVSPNSIDSSTAYDYR-PTVTSVTDRDATT 135
++PP F+ S P PP+ S P +TP V P+S S + YR P + R T
Sbjct: 163 LDPPLFTRSP---NPPPPSPSPPIPATPLPRVHPSSSSSPSPSPYRFPASPQLAARPPPT 219
Query: 136 PNP 138
+P
Sbjct: 220 EDP 222
>11_01_0342 +
2548147-2548275,2548385-2548425,2548521-2548570,
2548830-2548974,2549854-2549859,2550122-2550245,
2550422-2550877,2550960-2551013
Length = 334
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 82 HFSSSDVTITPAPPTFSHPSSTPRVFVSPNSIDSSTAYDYRPTVTSVTDRDATTPNPYAY 141
H + S +TPA F+ PSS+ V P S TA PT S TP +
Sbjct: 227 HTARSANLVTPA--FFTPPSSSSTSMVPPASSMMPTAPPLHPTSASAQRATYGTPLLQPF 284
Query: 142 EPP 144
PP
Sbjct: 285 PPP 287
>07_03_1762 -
29299328-29299437,29299782-29299871,29300487-29301291,
29301956-29303278
Length = 775
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 216 EENTGDVNDRIGSFGYVDPFGI-RRVIYYNTAPG-DGFQIRKNNR 258
E NT N GSFG P G+ +R NT P GF + + R
Sbjct: 523 ESNTNPANSSSGSFGSATPSGVFQRPPPINTQPSLQGFDLNLSPR 567
>01_07_0160 -
41563109-41563468,41563566-41563985,41564082-41564263,
41564362-41564542,41565066-41565084,41565185-41565445,
41566140-41566253,41566264-41566331,41566890-41567018,
41567141-41567245,41567317-41567456,41567519-41567687,
41567824-41567900,41568133-41568187,41568660-41568705,
41568806-41568894,41568996-41569061,41569360-41569425,
41569817-41569906,41570009-41570026
Length = 884
Score = 27.9 bits (59), Expect = 9.4
Identities = 31/132 (23%), Positives = 47/132 (35%), Gaps = 12/132 (9%)
Query: 107 FVSPNSIDSSTAYDYRPTVTSVTDRDATTPNPYAYEPPNTNSLDDGY-----YASDSQRY 161
F S S+DS + T+V AT + PP+ + GY Y S + RY
Sbjct: 140 FQSAESVDSIMQDSHELDGTTVVVDRATPKDEEVRYPPSRGASQGGYGAYNAYISAATRY 199
Query: 162 DVFN-PNSYRHADDWLRRQRPTAEIGDGYTPQFSTYDGAPFRRNGFRYYLPKQYHEENTG 220
P Y H + +I G Y G+ + ++ + E NT
Sbjct: 200 AALGAPTLYDHPGSAYGSKSSATKITGG------GYYGSSQGMGNKKIFVGRLPQEANTE 253
Query: 221 DVNDRIGSFGYV 232
D+ G FG +
Sbjct: 254 DLRHYFGKFGRI 265
>01_06_1682 - 39130696-39131705,39132355-39132583
Length = 412
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 92 PAPPTFSHPSSTPRVFVSPNSIDS-STAYDYRPTV----TSVTDRDATTPNPYAYEPP 144
P+PP S+ S P + PNS + T+Y++ P + + + P PY + P
Sbjct: 228 PSPPQSSYHSPPPYQYTPPNSYQAPPTSYNHPPPPYGYNSPIPPTNKYLPPPYYFNSP 285
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.136 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,892,296
Number of Sequences: 37544
Number of extensions: 487969
Number of successful extensions: 1263
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1226
Number of HSP's gapped (non-prelim): 54
length of query: 275
length of database: 14,793,348
effective HSP length: 81
effective length of query: 194
effective length of database: 11,752,284
effective search space: 2279943096
effective search space used: 2279943096
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)
- SilkBase 1999-2023 -