Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000346-TA|BGIBMGA000346-PA|IPR000618|Insect cuticle
protein
         (104 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC059404-1|AAH59404.1|  480|Homo sapiens B-cell CLL/lymphoma 6, ...    29   3.4  
AY517502-1|AAR98781.1|  143|Homo sapiens hypothetical protein pr...    29   3.4  
AB076581-1|BAC00963.1|  480|Homo sapiens BAZF protein.                 29   3.4  
AB076580-1|BAC00962.1|  480|Homo sapiens BAZF protein.                 29   3.4  

>BC059404-1|AAH59404.1|  480|Homo sapiens B-cell CLL/lymphoma 6,
           member B (zinc finger protein) protein.
          Length = 480

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 16/52 (30%), Positives = 22/52 (42%)

Query: 46  TSDGTSRQEEGKLDNPQSENAALTVTGQYAYVAPDGKHYTVTFTAGPNGFQP 97
           +S  +S  EEG +  PQS  +    T Q+   AP    Y +T  A      P
Sbjct: 238 SSSSSSSSEEGPIPGPQSRLSPTAATVQFKCGAPASTPYLLTSQAQDTSGSP 289


>AY517502-1|AAR98781.1|  143|Homo sapiens hypothetical protein
          protein.
          Length = 143

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 4/67 (5%)

Query: 33 SNVEPDGYSFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAYVAPDGKHYTVTFTAGP 92
          ++V P   +   ET +GT+  +    +  +S   ++  TG  A  A DG  YTV  ++GP
Sbjct: 9  TSVVPRPTTAPQETRNGTA--DAASKEGRKSSLPSVAPTGS-ASAAEDGA-YTVRPSSGP 64

Query: 93 NGFQPKT 99
          +G QP T
Sbjct: 65 HGSQPFT 71


>AB076581-1|BAC00963.1|  480|Homo sapiens BAZF protein.
          Length = 480

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 16/52 (30%), Positives = 22/52 (42%)

Query: 46  TSDGTSRQEEGKLDNPQSENAALTVTGQYAYVAPDGKHYTVTFTAGPNGFQP 97
           +S  +S  EEG +  PQS  +    T Q+   AP    Y +T  A      P
Sbjct: 238 SSSSSSSSEEGPIPGPQSRLSPTAATVQFKCGAPASTPYLLTSQAQDTSGSP 289


>AB076580-1|BAC00962.1|  480|Homo sapiens BAZF protein.
          Length = 480

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 16/52 (30%), Positives = 22/52 (42%)

Query: 46  TSDGTSRQEEGKLDNPQSENAALTVTGQYAYVAPDGKHYTVTFTAGPNGFQP 97
           +S  +S  EEG +  PQS  +    T Q+   AP    Y +T  A      P
Sbjct: 238 SSSSSSSSEEGPIPGPQSRLSPTAATVQFKCGAPASTPYLLTSQAQDTSGSP 289


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.312    0.130    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,972,821
Number of Sequences: 224733
Number of extensions: 633420
Number of successful extensions: 998
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 995
Number of HSP's gapped (non-prelim): 4
length of query: 104
length of database: 73,234,838
effective HSP length: 78
effective length of query: 26
effective length of database: 55,705,664
effective search space: 1448347264
effective search space used: 1448347264
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 58 (27.5 bits)