Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000346-TA|BGIBMGA000346-PA|IPR000618|Insect cuticle
protein
(104 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0300 + 27681204-27681656,27681745-27681840,27681933-276820... 31 0.17
06_03_0871 - 25562767-25563509,25563889-25565776 29 0.91
04_03_0298 + 14080353-14080927,14081041-14081554 28 1.6
04_03_0293 - 14001443-14001956,14002070-14002644 28 1.6
11_01_0329 + 2471015-2471075,2471152-2471432 27 2.8
05_04_0014 + 17171565-17172102,17172927-17173093 27 3.7
04_04_0072 + 22524974-22525310,22526334-22526552,22526826-225275... 27 3.7
02_04_0317 + 21996324-21996681,21996833-21996859,21997299-219982... 27 3.7
03_04_0180 + 18173005-18173976,18174066-18174170 26 4.9
03_02_0441 - 8517501-8517701,8518004-8518139,8519995-8520107,852... 26 4.9
09_06_0049 + 20486178-20486358,20486545-20486717,20487608-204876... 25 8.5
>02_05_0300 +
27681204-27681656,27681745-27681840,27681933-27682022,
27682126-27682227,27682310-27682456,27683608-27683748,
27683749-27683808,27685133-27685230,27685308-27685410,
27685954-27686037
Length = 457
Score = 31.1 bits (67), Expect = 0.17
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 53 QEEGKLDNPQSENAALTVTGQYAYVAP-DGKHYTVTFTAGPNGFQPKTSL 101
Q E L P + AL V + + A DG+ F+A NGF+P SL
Sbjct: 220 QAEMNLTGPTGQVYALAVGNELLFAATQDGRILAWRFSAATNGFEPAASL 269
>06_03_0871 - 25562767-25563509,25563889-25565776
Length = 876
Score = 28.7 bits (61), Expect = 0.91
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Query: 3 KYVTVACVLVALCSGAPQQNPQDVQILRFDSNV--EPDGYSFAYETSDGTSRQEEGKLDN 60
++V V VLV +C GA N V +L F V +P G + +D + G + N
Sbjct: 4 RWVVVFWVLVVMCRGACGLNADGVLLLSFKYAVTADPLGALAGWGYADESPCAWNGVVCN 63
Query: 61 --PQSENAALTVTGQYAYVAPDGKHYTVTFTAGPNG 94
PQ++ AA A +G + + NG
Sbjct: 64 GFPQADAAAAWTANVTGVAAAEGGNSSAAVPVPSNG 99
>04_03_0298 + 14080353-14080927,14081041-14081554
Length = 362
Score = 27.9 bits (59), Expect = 1.6
Identities = 17/43 (39%), Positives = 20/43 (46%)
Query: 2 LKYVTVACVLVALCSGAPQQNPQDVQILRFDSNVEPDGYSFAY 44
L +V VA VLV L G V L+F + PDG AY
Sbjct: 314 LLFVAVAGVLVDLIMGTGGNVAPPVTDLKFHTATMPDGMQLAY 356
>04_03_0293 - 14001443-14001956,14002070-14002644
Length = 362
Score = 27.9 bits (59), Expect = 1.6
Identities = 17/43 (39%), Positives = 20/43 (46%)
Query: 2 LKYVTVACVLVALCSGAPQQNPQDVQILRFDSNVEPDGYSFAY 44
L +V VA VLV L G V L+F + PDG AY
Sbjct: 314 LLFVAVAGVLVDLIMGTGGNVAPPVTDLKFHTATMPDGMQLAY 356
>11_01_0329 + 2471015-2471075,2471152-2471432
Length = 113
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 14 LCSGAPQQNPQDVQILRFDSNVEPDGYSFAYETSDGT 50
LC +Q+P D+ + SN D + Y SDGT
Sbjct: 63 LCGDGKKQSPIDIVTKQAISNPNLDSLNRTYTASDGT 99
>05_04_0014 + 17171565-17172102,17172927-17173093
Length = 234
Score = 26.6 bits (56), Expect = 3.7
Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 6/80 (7%)
Query: 2 LKYVTVACVLVALCSGAPQQNPQDVQILR---FDSNVEPDG---YSFAYETSDGTSRQEE 55
L + V V A A ++ P ++L F + P G Y+ T D T+ +
Sbjct: 6 LLLLAVLAVAAAAAEAAAEKKPTAYEVLESYDFPVGILPKGVTSYTLEATTGDFTATLDT 65
Query: 56 GKLDNPQSENAALTVTGQYA 75
G D+ S + G Y+
Sbjct: 66 GDDDDSSSSTCEFAIEGSYS 85
>04_04_0072 +
22524974-22525310,22526334-22526552,22526826-22527532,
22527664-22528482
Length = 693
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 32 DSNVEPDGYSFAYETSDGTSRQEEGKLDNPQSENAALTVTGQY 74
D+++E D + Y + +E ++DNPQ E G+Y
Sbjct: 391 DADLESDALGWQYISGSLPDGRELDRIDNPQLEGYKFDPHGEY 433
>02_04_0317 +
21996324-21996681,21996833-21996859,21997299-21998227,
21998317-21999162
Length = 719
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 32 DSNVEPDGYSFAYETSDGTSRQEEGKLDNPQSENAALTVTGQY 74
D+++E D + Y + +E ++DNPQ E G+Y
Sbjct: 408 DADLESDALGWQYISGSLPDGRELDRIDNPQLEGYKFDPHGEY 450
>03_04_0180 + 18173005-18173976,18174066-18174170
Length = 358
Score = 26.2 bits (55), Expect = 4.9
Identities = 12/21 (57%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Query: 8 ACVLVALCSGAPQQN-PQDVQ 27
A L ALCSGAP++N P+ V+
Sbjct: 198 ATALYALCSGAPEENGPRAVE 218
>03_02_0441 -
8517501-8517701,8518004-8518139,8519995-8520107,
8520189-8520284,8520376-8520590,8520675-8520797,
8520887-8520917,8521020-8521079,8521951-8522106,
8522185-8522274,8522347-8522562,8522671-8522805,
8522898-8523401,8523485-8523700,8524411-8524456,
8524542-8524678,8525059-8525191,8526084-8526358
Length = 960
Score = 26.2 bits (55), Expect = 4.9
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 15 CSGAPQQNPQDVQILRFDSNVEPDGYSFAYETSD 48
CS +PQ++ ++V ++ F S E G +F +D
Sbjct: 126 CSQSPQEDHREVALILFSSLTETIGTTFQSHLND 159
>09_06_0049 +
20486178-20486358,20486545-20486717,20487608-20487683,
20489377-20489465
Length = 172
Score = 25.4 bits (53), Expect = 8.5
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 39 GYS-FAYETSDGTSRQEEGKLDNPQSENAALTVTGQYA-YVAPDGKHYTVTFTAGPNGFQ 96
GYS F + DG S ++EGK P + L V + +P+ + T ++ +
Sbjct: 89 GYSMFVVDNKDGRSGEKEGKTLLPYCQGLELLVDSRLVEKKSPNNEPATASYRKEEMNIE 148
Query: 97 PKTSLGQK 104
+++L Q+
Sbjct: 149 QQSALVQR 156
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.312 0.130 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,296,431
Number of Sequences: 37544
Number of extensions: 125770
Number of successful extensions: 217
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 209
Number of HSP's gapped (non-prelim): 11
length of query: 104
length of database: 14,793,348
effective HSP length: 72
effective length of query: 32
effective length of database: 12,090,180
effective search space: 386885760
effective search space used: 386885760
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 53 (25.4 bits)
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