GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000346-TA|BGIBMGA000346-PA|IPR000618|Insect cuticle
protein
         (104 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    31   0.009
AF043439-1|AAC05664.1|  239|Anopheles gambiae putative pupal-spe...    26   0.25 
AF043433-1|AAC05656.1|  231|Anopheles gambiae putative pupal-spe...    25   0.57 
AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding pr...    24   0.99 
AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding pr...    24   0.99 
AY745234-1|AAU93513.1|   96|Anopheles gambiae thioredoxin-depend...    23   2.3  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    23   3.0  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    21   7.0  
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    21   9.2  
AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    21   9.2  

>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
          gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 31.1 bits (67), Expect = 0.009
 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 56 GKLDNPQSENAALTVTGQYAYVAPDGKHYTVTFTAGP-NGF 95
          G   + Q       V G Y+ V PDG   TV +TA P NGF
Sbjct: 35 GDSKSQQESRDGDVVQGSYSVVDPDGTKRTVDYTADPHNGF 75


>AF043439-1|AAC05664.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 4/54 (7%)

Query: 37  PDGYSFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAYVAPDGKHYTVTFTA 90
           P  Y F+Y   D    +  G + +         V GQY+ +  DG H  V + A
Sbjct: 89  PANYEFSYSVHD----EHTGDIKSQHETRHGDEVHGQYSLLDSDGHHRIVDYHA 138


>AF043433-1|AAC05656.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 37  PDGYSFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAYVAPDGKHYTVTFTA 90
           P  Y F+Y   D    +  G + N         V GQY+ +  DG    V + A
Sbjct: 81  PANYEFSYSVHD----EHTGDIKNQHETRHGDEVHGQYSLLDSDGHQRIVDYHA 130


>AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding
          protein AgamOBP32 protein.
          Length = 320

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 9/12 (75%), Positives = 11/12 (91%)

Query: 2  LKYVTVACVLVA 13
          LKY+T+ACVL A
Sbjct: 6  LKYITLACVLAA 17


>AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding
          protein AgamOBP33 protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 9/12 (75%), Positives = 11/12 (91%)

Query: 2  LKYVTVACVLVA 13
          LKY+T+ACVL A
Sbjct: 6  LKYITLACVLAA 17


>AY745234-1|AAU93513.1|   96|Anopheles gambiae
          thioredoxin-dependent peroxidase protein.
          Length = 96

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/39 (28%), Positives = 16/39 (41%)

Query: 56 GKLDNPQSENAALTVTGQYAYVAPDGKHYTVTFTAGPNG 94
          GKL+ P   +    ++  Y  + PDG      F   P G
Sbjct: 14 GKLEYPLLADLTKRISADYGVLLPDGISLRGLFIIDPAG 52


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 13/45 (28%), Positives = 16/45 (35%)

Query: 20  QQNPQDVQILRFDSNVEPDGYSFAYETSDGTSRQEEGKLDNPQSE 64
           Q  PQ     ++ S+       F  E  D T   EE    NP  E
Sbjct: 315 QHQPQQQHQQQYHSHPHHTPVQFKTELHDNTQYDEELSPQNPDDE 359


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 35   VEPDGYSFAYETSDGTSRQEEGKLDNPQSENAA 67
            V P  Y+   E++ GT+R+E  K     S+ ++
Sbjct: 1557 VTPVTYAQPSESAKGTTRRERSKQGRKVSDQSS 1589


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)

Query: 24  QDVQILRFDSNVEPDG 39
           +D + LRF S+  PDG
Sbjct: 400 KDKEFLRFISSTAPDG 415


>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 5/14 (35%), Positives = 10/14 (71%)

Query: 34  NVEPDGYSFAYETS 47
           N  PDGY++ ++ +
Sbjct: 226 NANPDGYAYTFQVN 239


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.312    0.130    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,847
Number of Sequences: 2123
Number of extensions: 4747
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 104
length of database: 516,269
effective HSP length: 55
effective length of query: 49
effective length of database: 399,504
effective search space: 19575696
effective search space used: 19575696
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 42 (21.0 bits)