Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000346-TA|BGIBMGA000346-PA|IPR000618|Insect cuticle
protein
(104 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 31 0.20
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 31 0.20
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 31 0.20
AC084152-7|AAK39310.1| 172|Caenorhabditis elegans Hypothetical ... 28 1.4
Z82266-13|CAB05187.1| 1080|Caenorhabditis elegans Hypothetical p... 27 2.5
Z68295-2|CAA92588.1| 1080|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical pr... 27 3.3
AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical ... 27 3.3
AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical ... 27 3.3
AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical ... 27 3.3
X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein. 26 4.4
U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of l... 26 4.4
U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of l... 26 4.4
U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of l... 26 4.4
AF026210-5|AAB71287.1| 632|Caenorhabditis elegans Hypothetical ... 26 4.4
AF026210-4|AAT81192.1| 627|Caenorhabditis elegans Hypothetical ... 26 4.4
Z34800-3|CAA84322.2| 722|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z49128-3|CAA88958.1| 832|Caenorhabditis elegans Hypothetical pr... 25 7.7
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 30.7 bits (66), Expect = 0.20
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 10/83 (12%)
Query: 10 VLVALCSGAPQQNPQDVQILRFDSNVEPDGY--------SFAYETSDGTSRQEEGKLDNP 61
VLV GA + +P D +PDG +F E D ++ EEGK P
Sbjct: 4301 VLVPSDEGATKTHPTDETSDAVHPITKPDGTPLATDSTGNFVTENGDVITKDEEGKPLGP 4360
Query: 62 QSENAALTVTGQYAY--VAPDGK 82
+ +G Y Y + PDG+
Sbjct: 4361 NGQILPTDASGNYIYPVIGPDGQ 4383
Score = 29.1 bits (62), Expect = 0.62
Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY----VAPDGKHYTVTFTAGPNG 94
SF E D EEGK P E A +G Y Y V P + VT GP+G
Sbjct: 5048 SFVTENGDRIEFNEEGKPLGPDGEVLATDASGNYVYPGSVVEPTAEPQEVTH--GPDG 5103
Score = 27.5 bits (58), Expect = 1.9
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY--VAPDGK 82
SF E + R E+GK P + +G Y Y V PDG+
Sbjct: 4485 SFVTEGGEIVERDEDGKPLGPDGQVLPTDASGNYIYPVVGPDGQ 4528
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY--VAPDGK 82
SF + + +EGK P + + +G Y Y V PDG+
Sbjct: 7872 SFVTDDGQAIGKDDEGKPIGPDGQTLPIDDSGNYIYPVVGPDGQ 7915
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY--VAPDGK 82
+F E + R +EGK P + +G Y Y + PDG+
Sbjct: 5991 NFITENGEIIERDDEGKPIGPDGQILPTDASGNYVYPVIGPDGQ 6034
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY--VAPDGK 82
+F + + + EEGK P + +G Y Y V PDG+
Sbjct: 6136 NFVTDNGETIEKDEEGKPIGPDGQTLPTDDSGNYIYPVVGPDGQ 6179
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY--VAPDGK 82
SF + + +EGK P + + +G Y Y + PDG+
Sbjct: 6426 SFITDDGQAIEKDDEGKPIGPDGQILPIDASGNYIYPVIGPDGQ 6469
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY--VAPDGK 82
SF + + +EGK P + +G Y Y + PDG+
Sbjct: 8017 SFVTDDGQAIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQ 8060
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY--VAPDGK 82
SF + + +EGK P + +G Y Y + PDG+
Sbjct: 8916 SFVRDDGQAIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQ 8959
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY--VAPDGK 82
SF + + +EGK P + +G Y Y + PDG+
Sbjct: 9061 SFVRDDGQAIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQ 9104
Score = 25.4 bits (53), Expect = 7.7
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAYVA--PDG 81
SF E ++ +EGK +P + +G Y Y A PDG
Sbjct: 11275 SFITENGKIVAKDDEGKPISPDGQVLPTDASGNYIYPALGPDG 11317
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 30.7 bits (66), Expect = 0.20
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 10/83 (12%)
Query: 10 VLVALCSGAPQQNPQDVQILRFDSNVEPDGY--------SFAYETSDGTSRQEEGKLDNP 61
VLV GA + +P D +PDG +F E D ++ EEGK P
Sbjct: 4346 VLVPSDEGATKTHPTDETSDAVHPITKPDGTPLATDSTGNFVTENGDVITKDEEGKPLGP 4405
Query: 62 QSENAALTVTGQYAY--VAPDGK 82
+ +G Y Y + PDG+
Sbjct: 4406 NGQILPTDASGNYIYPVIGPDGQ 4428
Score = 29.1 bits (62), Expect = 0.62
Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY----VAPDGKHYTVTFTAGPNG 94
SF E D EEGK P E A +G Y Y V P + VT GP+G
Sbjct: 5093 SFVTENGDRIEFNEEGKPLGPDGEVLATDASGNYVYPGSVVEPTAEPQEVTH--GPDG 5148
Score = 27.5 bits (58), Expect = 1.9
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY--VAPDGK 82
SF E + R E+GK P + +G Y Y V PDG+
Sbjct: 4530 SFVTEGGEIVERDEDGKPLGPDGQVLPTDASGNYIYPVVGPDGQ 4573
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY--VAPDGK 82
SF + + +EGK P + + +G Y Y V PDG+
Sbjct: 7917 SFVTDDGQAIGKDDEGKPIGPDGQTLPIDDSGNYIYPVVGPDGQ 7960
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY--VAPDGK 82
+F E + R +EGK P + +G Y Y + PDG+
Sbjct: 6036 NFITENGEIIERDDEGKPIGPDGQILPTDASGNYVYPVIGPDGQ 6079
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY--VAPDGK 82
+F + + + EEGK P + +G Y Y V PDG+
Sbjct: 6181 NFVTDNGETIEKDEEGKPIGPDGQTLPTDDSGNYIYPVVGPDGQ 6224
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY--VAPDGK 82
SF + + +EGK P + + +G Y Y + PDG+
Sbjct: 6471 SFITDDGQAIEKDDEGKPIGPDGQILPIDASGNYIYPVIGPDGQ 6514
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY--VAPDGK 82
SF + + +EGK P + +G Y Y + PDG+
Sbjct: 8062 SFVTDDGQAIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQ 8105
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY--VAPDGK 82
SF + + +EGK P + +G Y Y + PDG+
Sbjct: 8961 SFVRDDGQAIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQ 9004
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY--VAPDGK 82
SF + + +EGK P + +G Y Y + PDG+
Sbjct: 9106 SFVRDDGQAIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQ 9149
Score = 25.4 bits (53), Expect = 7.7
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAYVA--PDG 81
SF E ++ +EGK +P + +G Y Y A PDG
Sbjct: 11320 SFITENGKIVAKDDEGKPISPDGQVLPTDASGNYIYPALGPDG 11362
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 30.7 bits (66), Expect = 0.20
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 10/83 (12%)
Query: 10 VLVALCSGAPQQNPQDVQILRFDSNVEPDGY--------SFAYETSDGTSRQEEGKLDNP 61
VLV GA + +P D +PDG +F E D ++ EEGK P
Sbjct: 4346 VLVPSDEGATKTHPTDETSDAVHPITKPDGTPLATDSTGNFVTENGDVITKDEEGKPLGP 4405
Query: 62 QSENAALTVTGQYAY--VAPDGK 82
+ +G Y Y + PDG+
Sbjct: 4406 NGQILPTDASGNYIYPVIGPDGQ 4428
Score = 29.1 bits (62), Expect = 0.62
Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY----VAPDGKHYTVTFTAGPNG 94
SF E D EEGK P E A +G Y Y V P + VT GP+G
Sbjct: 5093 SFVTENGDRIEFNEEGKPLGPDGEVLATDASGNYVYPGSVVEPTAEPQEVTH--GPDG 5148
Score = 27.5 bits (58), Expect = 1.9
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY--VAPDGK 82
SF E + R E+GK P + +G Y Y V PDG+
Sbjct: 4530 SFVTEGGEIVERDEDGKPLGPDGQVLPTDASGNYIYPVVGPDGQ 4573
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY--VAPDGK 82
SF + + +EGK P + + +G Y Y V PDG+
Sbjct: 7917 SFVTDDGQAIGKDDEGKPIGPDGQTLPIDDSGNYIYPVVGPDGQ 7960
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY--VAPDGK 82
+F E + R +EGK P + +G Y Y + PDG+
Sbjct: 6036 NFITENGEIIERDDEGKPIGPDGQILPTDASGNYVYPVIGPDGQ 6079
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY--VAPDGK 82
+F + + + EEGK P + +G Y Y V PDG+
Sbjct: 6181 NFVTDNGETIEKDEEGKPIGPDGQTLPTDDSGNYIYPVVGPDGQ 6224
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY--VAPDGK 82
SF + + +EGK P + + +G Y Y + PDG+
Sbjct: 6471 SFITDDGQAIEKDDEGKPIGPDGQILPIDASGNYIYPVIGPDGQ 6514
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY--VAPDGK 82
SF + + +EGK P + +G Y Y + PDG+
Sbjct: 8062 SFVTDDGQAIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQ 8105
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY--VAPDGK 82
SF + + +EGK P + +G Y Y + PDG+
Sbjct: 8961 SFVRDDGQAIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQ 9004
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAY--VAPDGK 82
SF + + +EGK P + +G Y Y + PDG+
Sbjct: 9106 SFVRDDGQAIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQ 9149
Score = 25.4 bits (53), Expect = 7.7
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 41 SFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAYVA--PDG 81
SF E ++ +EGK +P + +G Y Y A PDG
Sbjct: 11320 SFITENGKIVAKDDEGKPISPDGQVLPTDASGNYIYPALGPDG 11362
>AC084152-7|AAK39310.1| 172|Caenorhabditis elegans Hypothetical
protein Y102A11A.7 protein.
Length = 172
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 5 VTVACVL-VALCSGAPQQNPQDVQILRFDSNVEPDGYSFAYETSDGTSRQEEGKLDNP 61
+TV C + + LC+ +N Q ++L+F S+ SFAY ++G G +P
Sbjct: 108 LTVICWMGIWLCNRRKDKN-QKKELLKFGSSSSVSNMSFAYPIANGHYHFGTGPFQSP 164
>Z82266-13|CAB05187.1| 1080|Caenorhabditis elegans Hypothetical
protein F23B2.12 protein.
Length = 1080
Score = 27.1 bits (57), Expect = 2.5
Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 32 DSNVEPDGYSFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAYVAPDGKHYTVTFTAG 91
D N+ PD Y +ET G+ RQ + +N ++ + P G ++ + G
Sbjct: 562 DFNMSPDDYPAGFET--GSFRQRQDHFNNQNADFFQQRFFKNTQWAKPGGPNFLMIGGEG 619
Query: 92 PN 93
P+
Sbjct: 620 PD 621
>Z68295-2|CAA92588.1| 1080|Caenorhabditis elegans Hypothetical
protein F23B2.12 protein.
Length = 1080
Score = 27.1 bits (57), Expect = 2.5
Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 32 DSNVEPDGYSFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAYVAPDGKHYTVTFTAG 91
D N+ PD Y +ET G+ RQ + +N ++ + P G ++ + G
Sbjct: 562 DFNMSPDDYPAGFET--GSFRQRQDHFNNQNADFFQQRFFKNTQWAKPGGPNFLMIGGEG 619
Query: 92 PN 93
P+
Sbjct: 620 PD 621
>Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical
protein F36H2.1c protein.
Length = 1071
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 8 ACVLVALCSGAPQQNPQDVQILR 30
AC V C +P+Q Q VQ+LR
Sbjct: 775 ACTAVVCCRCSPEQKAQIVQLLR 797
>Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical
protein F36H2.1b protein.
Length = 1035
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 8 ACVLVALCSGAPQQNPQDVQILR 30
AC V C +P+Q Q VQ+LR
Sbjct: 739 ACTAVVCCRCSPEQKAQIVQLLR 761
>Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical
protein F36H2.1a protein.
Length = 1074
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 8 ACVLVALCSGAPQQNPQDVQILR 30
AC V C +P+Q Q VQ+LR
Sbjct: 778 ACTAVVCCRCSPEQKAQIVQLLR 800
>AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical
protein F36H2.1c protein.
Length = 1071
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 8 ACVLVALCSGAPQQNPQDVQILR 30
AC V C +P+Q Q VQ+LR
Sbjct: 775 ACTAVVCCRCSPEQKAQIVQLLR 797
>AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical
protein F36H2.1b protein.
Length = 1035
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 8 ACVLVALCSGAPQQNPQDVQILR 30
AC V C +P+Q Q VQ+LR
Sbjct: 739 ACTAVVCCRCSPEQKAQIVQLLR 761
>AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical
protein F36H2.1a protein.
Length = 1074
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 8 ACVLVALCSGAPQQNPQDVQILR 30
AC V C +P+Q Q VQ+LR
Sbjct: 778 ACTAVVCCRCSPEQKAQIVQLLR 800
>X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein.
Length = 582
Score = 26.2 bits (55), Expect = 4.4
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 39 GYSFAYETSDGTSRQEEGKLDNPQSENAALTVT--GQYA--YVAPDGKHY 84
GY A+ T D ++ E P S L+ T GQ+A YVAPDGK Y
Sbjct: 276 GYC-AFLTYDEVKKRLEKLTKKPGSYIFRLSCTRPGQWAIGYVAPDGKIY 324
>U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform a protein.
Length = 582
Score = 26.2 bits (55), Expect = 4.4
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 39 GYSFAYETSDGTSRQEEGKLDNPQSENAALTVT--GQYA--YVAPDGKHY 84
GY A+ T D ++ E P S L+ T GQ+A YVAPDGK Y
Sbjct: 276 GYC-AFLTYDEVKKRLEKLTKKPGSYIFRLSCTRPGQWAIGYVAPDGKIY 324
>U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform b protein.
Length = 565
Score = 26.2 bits (55), Expect = 4.4
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 39 GYSFAYETSDGTSRQEEGKLDNPQSENAALTVT--GQYA--YVAPDGKHY 84
GY A+ T D ++ E P S L+ T GQ+A YVAPDGK Y
Sbjct: 259 GYC-AFLTYDEVKKRLEKLTKKPGSYIFRLSCTRPGQWAIGYVAPDGKIY 307
>U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform c protein.
Length = 523
Score = 26.2 bits (55), Expect = 4.4
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 39 GYSFAYETSDGTSRQEEGKLDNPQSENAALTVT--GQYA--YVAPDGKHY 84
GY A+ T D ++ E P S L+ T GQ+A YVAPDGK Y
Sbjct: 259 GYC-AFLTYDEVKKRLEKLTKKPGSYIFRLSCTRPGQWAIGYVAPDGKIY 307
>AF026210-5|AAB71287.1| 632|Caenorhabditis elegans Hypothetical
protein F48A11.5a protein.
Length = 632
Score = 26.2 bits (55), Expect = 4.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 22 NPQDVQILRFDSNVEPDGYSFAYETSD 48
NP+ V + DS+ + D + AYE D
Sbjct: 222 NPRRVDVFNVDSDEDDDSMAIAYEDDD 248
>AF026210-4|AAT81192.1| 627|Caenorhabditis elegans Hypothetical
protein F48A11.5b protein.
Length = 627
Score = 26.2 bits (55), Expect = 4.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 22 NPQDVQILRFDSNVEPDGYSFAYETSD 48
NP+ V + DS+ + D + AYE D
Sbjct: 217 NPRRVDVFNVDSDEDDDSMAIAYEDDD 243
>Z34800-3|CAA84322.2| 722|Caenorhabditis elegans Hypothetical
protein F45H7.2b protein.
Length = 722
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 45 ETSDGTSRQEEGKLDNPQSENAALTVTGQYAYVAPDG--KHYTVTFTAGPNGFQPKT 99
+T++ S LDN +++N ++ G Y + +H+ + T P + T
Sbjct: 47 KTTNSNSTSNSNSLDNKKTDNISMFNDGYYTHEIKTALPRHHNILTTVKPENLKVNT 103
>Z49128-3|CAA88958.1| 832|Caenorhabditis elegans Hypothetical
protein M03C11.3 protein.
Length = 832
Score = 25.4 bits (53), Expect = 7.7
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 37 PDGYSFAYETSDGTSRQEEGKLDNPQSENAALTVTGQY 74
PD Y E +DG +QEE + S++ +TV ++
Sbjct: 690 PDDYWQDKEPTDGIVKQEEAEEKEKSSDDLLITVAKKH 727
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.312 0.130 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,863,949
Number of Sequences: 27539
Number of extensions: 113669
Number of successful extensions: 245
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 170
Number of HSP's gapped (non-prelim): 83
length of query: 104
length of database: 12,573,161
effective HSP length: 71
effective length of query: 33
effective length of database: 10,617,892
effective search space: 350390436
effective search space used: 350390436
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 53 (25.4 bits)
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