Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000345-TA|BGIBMGA000345-PA|IPR000618|Insect cuticle
protein
         (105 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S52450-1|AAB24921.1|  143|Homo sapiens sterol carrier protein 2 ...    29   3.4  

>S52450-1|AAB24921.1|  143|Homo sapiens sterol carrier protein 2
          protein.
          Length = 143

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 13 AGVIIAQEQKSTAEILSDNSFVRPDGYDFEFKTSDGVSRKEEAGLITVGENQGIAVRGS 71
          A ++  + +K   E      FV+  G  F FK  DG   KE+  ++ V   QG  +  S
Sbjct: 29 ANLVFKEIEKKLEE--EGEQFVKKIGGIFAFKVKDGPGGKEDTWVVDVKNGQGSVLPNS 85


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.316    0.135    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,591,885
Number of Sequences: 224733
Number of extensions: 515772
Number of successful extensions: 1099
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1098
Number of HSP's gapped (non-prelim): 1
length of query: 105
length of database: 73,234,838
effective HSP length: 79
effective length of query: 26
effective length of database: 55,480,931
effective search space: 1442504206
effective search space used: 1442504206
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)