Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000344-TA|BGIBMGA000344-PA|undefined
(104 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 31 0.049
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 29 0.20
SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pomb... 28 0.26
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 27 0.60
SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|... 27 0.60
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 27 0.60
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 26 1.1
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 26 1.1
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 26 1.4
SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9 |Schizos... 26 1.4
SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc... 25 3.2
SPCC1322.12c |bub1||serine/threonine protein kinase Bub1|Schizos... 25 3.2
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 24 4.3
SPAC1B1.02c |||NAD/NADH kinase |Schizosaccharomyces pombe|chr 1|... 24 4.3
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 24 4.3
SPBC15C4.03 |||Rab geranylgeranyltransferase escort protein |Sch... 24 4.3
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 24 4.3
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 24 5.6
SPAC3C7.07c |||arginine-tRNA protein transferase |Schizosaccharo... 24 5.6
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 24 5.6
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 24 5.6
SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8 |Schizosacch... 24 5.6
SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit ... 24 5.6
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 24 5.6
SPAC22H10.11c ||||Schizosaccharomyces pombe|chr 1|||Manual 23 7.4
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 23 7.4
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 23 9.8
SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomy... 23 9.8
SPAC1527.03 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 23 9.8
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 23 9.8
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 30.7 bits (66), Expect = 0.049
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 14 VIQPNKPATKPKAVAMDTFPFSDKVTDENEKGNQNDTS-LNLSDIPEKNKEISTENTYDT 72
+++ + KPK + + SDK+TD + GN ++ S L ++ + KE+S + T D
Sbjct: 604 IMRKRRNKVKPKGIKSEVA--SDKITD-SSPGNMSEASESELEEVFKNPKELSKKKTTDF 660
Query: 73 STDSGFTTSIYYDDELFNRSG 93
D + S Y E +G
Sbjct: 661 K-DKEYYMSHYAPKESIQETG 680
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 28.7 bits (61), Expect = 0.20
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 38 VTDENEKGNQNDTSLNLSDIPEKNKEISTENTYDTSTD 75
V +E E ++N+ + D+ EK+ +I+ E+T T TD
Sbjct: 420 VGEEKESKDENNKASLHKDVEEKDTKITNEDTGKTETD 457
>SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 923
Score = 28.3 bits (60), Expect = 0.26
Identities = 16/47 (34%), Positives = 20/47 (42%)
Query: 32 FPFSDKVTDENEKGNQNDTSLNLSDIPEKNKEISTENTYDTSTDSGF 78
FPFS + Q D L E K I T+ +D ST+ GF
Sbjct: 89 FPFSISFLKNDVVRFQMDEKSRLEGTVEYEKNILTKRRFDASTELGF 135
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 27.1 bits (57), Expect = 0.60
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 23 KPKAVAMDTFPFSDKVTDENEKGNQNDTSLNLSDIPEKNKEISTENTYDTSTD 75
K KAVA SD + E E+ +++ +SD E E +E+ ++ ++
Sbjct: 71 KKKAVAASEDSESDSESSEEEEETESEEDSEVSDESESESESESESEEESESE 123
>SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 699
Score = 27.1 bits (57), Expect = 0.60
Identities = 12/25 (48%), Positives = 19/25 (76%), Gaps = 2/25 (8%)
Query: 46 NQNDTSLNLSDIPE--KNKEISTEN 68
N ND SLN+SD P+ + +E+S++N
Sbjct: 458 NGNDESLNVSDFPQIVEQEELSSKN 482
Score = 23.0 bits (47), Expect = 9.8
Identities = 11/40 (27%), Positives = 23/40 (57%)
Query: 42 NEKGNQNDTSLNLSDIPEKNKEISTENTYDTSTDSGFTTS 81
NE G+Q+ + L DI ++ ++T +++ D+ +TS
Sbjct: 269 NENGHQDTQNEVLRDIVLEHPTAKAQDTGESNKDNNTSTS 308
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 27.1 bits (57), Expect = 0.60
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 37 KVTDENEKGNQNDTSLNLSDIPEKNKEISTENTYDTSTDS 76
K + K N++ L++ IP K STE + + +++S
Sbjct: 6 KKSTSTVKDNEHSLDLSIKSIPSNEKNFSTEKSENEASES 45
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 26.2 bits (55), Expect = 1.1
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 44 KGNQNDTSLNLSDIPEKNKEISTENTYDTSTDSGFTTSIYYDDELFNRS 92
+G ++ S + + E + +TE +D DS +S Y D++ N+S
Sbjct: 102 EGYKSGESNTVKEPKELHTATNTETQFDDDRDSTKLSSEYVKDDIVNKS 150
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 26.2 bits (55), Expect = 1.1
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 35 SDKVTDENEKGNQ-NDTSLNLSDIPEKNKEISTENTYDTSTD 75
++K + E NQ N+ S + ++ E+ ++ S+ENT+D D
Sbjct: 1601 AEKEKTKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDD 1642
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 25.8 bits (54), Expect = 1.4
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 7 PFEPVFSVIQPNKPATKPKAVAMDTFPFSDKVT 39
P +FS P+ +TKP TF F+ T
Sbjct: 465 PVSSIFSFNAPSAASTKPSPAVSSTFSFNAPTT 497
>SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 591
Score = 25.8 bits (54), Expect = 1.4
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 44 KGNQNDTSLNLSDIPEKNKEISTENTYD-TSTDSGFTTSIYYDDE 87
K QN L SD+P+KN E S N + TS S YY E
Sbjct: 434 KRQQNFKPLT-SDLPQKNSEFSETNAMNQTSNHSHADGQRYYRPE 477
>SPAC6G9.04 |mug79||meiotically upregulated gene
Mug79|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 24.6 bits (51), Expect = 3.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 35 SDKVTDENEKGNQNDTSLNLSDIPEKNKEISTEN 68
S K+ + GN+N TSL E + ++ EN
Sbjct: 968 SSKLLKQESSGNKNSTSLESDAFKESSFVLNEEN 1001
>SPCC1322.12c |bub1||serine/threonine protein kinase
Bub1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1044
Score = 24.6 bits (51), Expect = 3.2
Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 2/71 (2%)
Query: 1 MHNMNKPFE--PVFSVIQPNKPATKPKAVAMDTFPFSDKVTDENEKGNQNDTSLNLSDIP 58
+HN + P S P + K V+ T P K + + S N SD+P
Sbjct: 182 LHNAHPSIHDAPYSSPFPPPRIVLGSKPVSSSTLPSKPKSFQVFSDASSSRDSQNASDLP 241
Query: 59 EKNKEISTENT 69
+ S NT
Sbjct: 242 QAKSLESEANT 252
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 24.2 bits (50), Expect = 4.3
Identities = 16/61 (26%), Positives = 26/61 (42%)
Query: 27 VAMDTFPFSDKVTDENEKGNQNDTSLNLSDIPEKNKEISTENTYDTSTDSGFTTSIYYDD 86
+A+D F +E+E S DI E + +T D ++DS +S +D
Sbjct: 174 LAIDGFGAGAIAENEDESSQDESESEEEDDITEPVPSFANISTQDFNSDSAAGSSDSEED 233
Query: 87 E 87
E
Sbjct: 234 E 234
>SPAC1B1.02c |||NAD/NADH kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 537
Score = 24.2 bits (50), Expect = 4.3
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 29 MDTFPFSDKVTDENEKGNQNDTSLNLSDIPEKNKEISTENTYDTSTDSGFTTS----IYY 84
+DTF F+ + N + ++ LS++ + K + ++ Y + FT IY
Sbjct: 187 LDTFSFTPSSSHNNMASSNTQSNTQLSEMESEEKSFN-KDVYPNDEYTPFTPKNQFVIYL 245
Query: 85 DDEL 88
+D L
Sbjct: 246 EDTL 249
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 24.2 bits (50), Expect = 4.3
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Query: 5 NKPFEPVFSVIQPNKPAT-----KPKAVAMDTFPFSDKVTDENEKGNQNDTSLNLSDIPE 59
++P +P + QP+K KP ++ + PF K D N T + P+
Sbjct: 306 SEPSKPSIAPSQPSKTNVSAAYEKPAELSSSSVPFPHKSQDSATPANVETTPSTATSAPK 365
Query: 60 KN 61
K+
Sbjct: 366 KS 367
>SPBC15C4.03 |||Rab geranylgeranyltransferase escort protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 459
Score = 24.2 bits (50), Expect = 4.3
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 40 DENEKGNQNDTSLNLSDIPEKNKEISTENTYDTSTDSG 77
DEN + D SL L D+ + N++I ++ D+G
Sbjct: 36 DENSFYGEIDGSLTLRDLEQINEKIKKVDSSQILNDNG 73
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 24.2 bits (50), Expect = 4.3
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 46 NQNDTSLNLSDIPEKNKEISTENTYDTSTDSGFTTSIYYDDELFNRSGVSAQL 98
NQ+D SLN D EK+ + + N + +G + I + E + G QL
Sbjct: 1008 NQSD-SLNKEDAEEKSPKPNVVNVTSITKTAGASVEIQNNIESASSGGDKTQL 1059
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 23.8 bits (49), Expect = 5.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 37 KVTDENEKGNQNDTSLNLSDIPE 59
K D +E NQN S+N ++I E
Sbjct: 4335 KSIDRDESANQNPDSMNSTNIAE 4357
>SPAC3C7.07c |||arginine-tRNA protein transferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 361
Score = 23.8 bits (49), Expect = 5.6
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Query: 59 EKNKEISTENTYDTSTDSGFTTSIYYDDELFNR 91
E N +I T YD+S DS Y LFNR
Sbjct: 268 ENNSDIQTAVDYDSSEDSSQNEDDY---TLFNR 297
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 23.8 bits (49), Expect = 5.6
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 18 NKPATKPKAVAMDTFPFSDKVTDENEKGNQNDTSLNLSDIPEKNKEISTENT 69
N P P AVA + SD+ + N + + + ++N +IS NT
Sbjct: 211 NNPLKSPDAVAYSSETVSDEKQPTEHPVSANVPAKSEKAVCDENTKISLTNT 262
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 23.8 bits (49), Expect = 5.6
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 40 DENEKGNQNDTSLNLSDIPE-KNKEISTENTYDTSTDSGFTTSIYYDDEL 88
DEN +Q + N IP+ + E+ T TS ++ + T+ Y+D L
Sbjct: 168 DENYSSSQKEIYDNDETIPKPPSPEVEKIET-STSVENAYITNSQYNDTL 216
>SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 23.8 bits (49), Expect = 5.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 32 FPFSDKVTDENEKGNQNDTSLNLSDIPEKNKEISTE 67
FP S+ TD + SL L+ P +E+++E
Sbjct: 50 FPVSEDATDYPSGTTSENESLPLNRAPRSLREVASE 85
>SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit
Sfc4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 23.8 bits (49), Expect = 5.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 52 LNLSDIPEKNKEISTENTYDTSTDSGF 78
L LS + + +K S+E+T T+ D GF
Sbjct: 951 LGLSPMSQGDKMTSSESTVSTTYDFGF 977
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 23.8 bits (49), Expect = 5.6
Identities = 13/54 (24%), Positives = 26/54 (48%)
Query: 5 NKPFEPVFSVIQPNKPATKPKAVAMDTFPFSDKVTDENEKGNQNDTSLNLSDIP 58
++P PV V K + + +TF S + ++ + QN + +L++IP
Sbjct: 224 SRPAPPVQDVTSSTKYGSSTGSSGFNTFNTSPHIFNQRHQYLQNYYTASLTNIP 277
>SPAC22H10.11c ||||Schizosaccharomyces pombe|chr 1|||Manual
Length = 629
Score = 23.4 bits (48), Expect = 7.4
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
Query: 60 KNKEISTENTYDTSTDSGFTTSIYYDDE 87
K+K +ST Y+ T++GF+TS ++E
Sbjct: 181 KSKHLST---YEGETENGFSTSTEEEEE 205
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 23.4 bits (48), Expect = 7.4
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 24 PKAVAMDTFPFSDKVTDENEKGNQNDTSLNLSDIPEKNKE 63
PK + +K + G ND S N ++ EK KE
Sbjct: 1381 PKVNGKSSVTRGNKTNLKARNGRNNDDSSNKINLSEKEKE 1420
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 23.0 bits (47), Expect = 9.8
Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 30 DTFPFSDKVTDENEKGNQNDTSLNLSDIPEKNKEISTENT---YDTSTDSG 77
DT S + + +DTS +L+ + NK + +N +D +++G
Sbjct: 362 DTLSESSTTSISSSPSENSDTSDDLTKVDSPNKSLVNDNVSAKHDKESENG 412
>SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1583
Score = 23.0 bits (47), Expect = 9.8
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 58 PEKNKEISTENTYDTSTDSGFTT 80
P++ + S+ NT +S+D+GF T
Sbjct: 136 PKEKPDASSINTNRSSSDNGFLT 158
>SPAC1527.03 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 475
Score = 23.0 bits (47), Expect = 9.8
Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 16 QPNKPATKPKAVAMDTFPFSDKVTDE--NEKGNQNDTSLNLSDIPEKNKEISTENTYDTS 73
Q N K + ++D+ S + D+ N G+Q +S N ++P+ +++ S++ + +S
Sbjct: 193 QTNYSREKDASRSIDSSNPSAEYRDDINNTFGSQTVSSANGKEVPQTSEDSSSQAPHHSS 252
Query: 74 TDSGFTTS 81
+ SG S
Sbjct: 253 S-SGHAPS 259
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 23.0 bits (47), Expect = 9.8
Identities = 13/60 (21%), Positives = 22/60 (36%)
Query: 17 PNKPATKPKAVAMDTFPFSDKVTDENEKGNQNDTSLNLSDIPEKNKEISTENTYDTSTDS 76
P+KP + P ++ ++N T L+D+ +N S YD S
Sbjct: 301 PSKPEIPFRHPTSKPLPPKPLSRSKSSSLSRNQTRSQLNDLSAENDSTSNSTEYDDQLQS 360
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.307 0.126 0.347
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,520
Number of Sequences: 5004
Number of extensions: 24348
Number of successful extensions: 107
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 78
Number of HSP's gapped (non-prelim): 36
length of query: 104
length of database: 2,362,478
effective HSP length: 63
effective length of query: 41
effective length of database: 2,047,226
effective search space: 83936266
effective search space used: 83936266
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 47 (23.0 bits)
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