GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000344-TA|BGIBMGA000344-PA|undefined
         (104 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             24   0.99 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            22   5.3  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    21   7.0  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    21   7.0  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    21   9.2  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    21   9.2  

>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 5   NKPFEPVFSVIQPNKPATKPKAVAMDTFP 33
           + PF    ++     P T P+ V + TFP
Sbjct: 536 SSPFSEFLALDMKEAPTTNPRIVPIPTFP 564


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)

Query: 37  KVTDENEKGNQNDTSLNLSDIPEK 60
           +V   N KGN NDT +  S +P K
Sbjct: 815 RVLTINHKGNLNDTEVQKS-LPPK 837


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 15/66 (22%), Positives = 25/66 (37%)

Query: 26  AVAMDTFPFSDKVTDENEKGNQNDTSLNLSDIPEKNKEISTENTYDTSTDSGFTTSIYYD 85
           A +MDT    + +  +     +    + L+  P+KNK+           DSG       +
Sbjct: 50  AESMDTSHKPNPLEQKTNAHIEKIFLITLNKNPQKNKQFVYVEDVAQGVDSGLLDLDVLE 109

Query: 86  DELFNR 91
             LF R
Sbjct: 110 QALFER 115


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 6/18 (33%), Positives = 13/18 (72%)

Query: 76  SGFTTSIYYDDELFNRSG 93
           +G++T  ++D  L+N +G
Sbjct: 345 NGYSTKCFFDRHLYNLTG 362


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)

Query: 52  LNLSDIPEKNKE 63
           L L D+P+KNK+
Sbjct: 414 LELQDVPKKNKK 425


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)

Query: 65  STENTYDTSTDSGFT 79
           +T+NT +T TD  FT
Sbjct: 411 TTDNTDNTQTDDTFT 425


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.307    0.126    0.347 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,872
Number of Sequences: 2123
Number of extensions: 4391
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 104
length of database: 516,269
effective HSP length: 55
effective length of query: 49
effective length of database: 399,504
effective search space: 19575696
effective search space used: 19575696
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 42 (21.0 bits)