Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000344-TA|BGIBMGA000344-PA|undefined
(104 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g01320.1 68414.m00048 tetratricopeptide repeat (TPR)-containi... 33 0.036
At3g09360.1 68416.m01110 transcription factor IIB (TFIIB) family... 31 0.19
At1g49630.3 68414.m05566 peptidase M16 family protein / insulina... 30 0.26
At1g49630.2 68414.m05565 peptidase M16 family protein / insulina... 30 0.26
At1g49630.1 68414.m05564 peptidase M16 family protein / insulina... 30 0.26
At5g63780.1 68418.m08005 zinc finger (C3HC4-type RING finger) fa... 29 0.78
At5g06700.1 68418.m00757 expressed protein strong similarity to ... 29 0.78
At2g27070.1 68415.m03252 two-component responsive regulator fami... 28 1.0
At4g19180.1 68417.m02830 nucleoside phosphatase family protein /... 27 1.8
At3g62690.1 68416.m07042 zinc finger (C3HC4-type RING finger) fa... 27 1.8
At4g22680.1 68417.m03273 myb family transcription factor (MYB85)... 27 3.1
At3g61850.2 68416.m06946 Dof zinc finger protein DAG1 / Dof affe... 27 3.1
At3g61850.1 68416.m06945 Dof zinc finger protein DAG1 / Dof affe... 27 3.1
At3g54800.1 68416.m06064 pleckstrin homology (PH) domain-contain... 27 3.1
At2g20290.1 68415.m02370 myosin, putative similar to myosin (GI:... 27 3.1
At5g38740.1 68418.m04685 MADS-box family protein contains simila... 26 4.2
At4g17220.1 68417.m02590 expressed protein 26 4.2
At3g19170.1 68416.m02434 peptidase M16 family protein / insulina... 26 4.2
At3g06980.1 68416.m00829 DEAD/DEAH box helicase, putative contai... 26 4.2
At2g33350.1 68415.m04088 hypothetical protein 26 4.2
At2g24700.1 68415.m02951 transcriptional factor B3 family protei... 26 4.2
At1g48290.1 68414.m05394 expressed protein ; expression supporte... 26 4.2
At5g41020.1 68418.m04986 myb family transcription factor contain... 26 5.5
At5g08200.1 68418.m00959 peptidoglycan-binding LysM domain-conta... 26 5.5
At4g27330.1 68417.m03921 sporocyteless (SPL) identical to sporoc... 26 5.5
At2g20430.1 68415.m02384 p21-rho-binding domain-containing prote... 26 5.5
At1g05490.1 68414.m00559 C protein immunoglobulin-A-binding beta... 26 5.5
At5g60650.1 68418.m07612 expressed protein ; expression support... 25 7.3
At5g55560.1 68418.m06923 protein kinase family protein contains ... 25 7.3
At5g33290.1 68418.m03948 exostosin family protein contains Pfam ... 25 7.3
At4g26630.1 68417.m03837 expressed protein 25 7.3
At4g08430.1 68417.m01392 Ulp1 protease family protein similar to... 25 7.3
At3g60380.1 68416.m06753 expressed protein 25 7.3
At3g18720.1 68416.m02377 F-box family protein contains Pfam PF00... 25 7.3
At1g76710.2 68414.m08928 SET domain-containing protein (ASHH1) l... 25 7.3
At1g76710.1 68414.m08927 SET domain-containing protein (ASHH1) l... 25 7.3
At1g75260.1 68414.m08743 isoflavone reductase family protein sim... 25 7.3
At5g60150.1 68418.m07540 expressed protein ; expression supporte... 25 9.6
At4g20850.1 68417.m03025 subtilase family protein contains simil... 25 9.6
At4g08750.1 68417.m01443 RNA recognition motif (RRM)-containing ... 25 9.6
At3g57050.3 68416.m06352 cystathionine beta-lyase, chloroplast /... 25 9.6
At3g57050.1 68416.m06350 cystathionine beta-lyase, chloroplast /... 25 9.6
At3g10550.1 68416.m01266 expressed protein 25 9.6
At2g42980.1 68415.m05332 aspartyl protease family protein contai... 25 9.6
At2g31280.1 68415.m03819 basic helix-loop-helix (bHLH) protein-r... 25 9.6
At2g28800.1 68415.m03501 chloroplast membrane protein (ALBINO3) ... 25 9.6
At2g16270.1 68415.m01863 expressed protein and genefinder; expr... 25 9.6
At2g13150.1 68415.m01450 expressed protein contains a bZIP trans... 25 9.6
>At1g01320.1 68414.m00048 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|P46825 Kinesin light chain
(KLC) {Loligo pealeii}; contains Pfam profile PF00515:
TPR Domain
Length = 1797
Score = 33.1 bits (72), Expect = 0.036
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 43 EKGNQNDTSLNLSDIP-EKNKEISTENTYDTSTDSG 77
EK Q++ S +L +IP EK KE+S E+T +T ++ G
Sbjct: 1161 EKSKQSNVSEHLVEIPREKQKEMSEEDTEETGSEEG 1196
>At3g09360.1 68416.m01110 transcription factor IIB (TFIIB) family
protein contains Pfam domain, PF00382: Transcription
factor TFIIB repeat
Length = 600
Score = 30.7 bits (66), Expect = 0.19
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 8 FEPVFSVIQPNKPATKPKAVAMDTFPFSDKVTDENEKGNQNDTSLNLSDIPEKNKEISTE 67
++ + S+ + P PK +T K ++ K N+++ N D E+++E
Sbjct: 510 YDVLESLFDTSAPEKSPKRSKTETDIEKKKEENKEMKSNEHENGEN-EDEDEEDEEEGNV 568
Query: 68 NTYDTSTDSGFTTSIYYDDE 87
+YD TD Y +DE
Sbjct: 569 ESYDMKTDFQNGEKFYEEDE 588
>At1g49630.3 68414.m05566 peptidase M16 family protein / insulinase
family protein contains Pfam domain, PF05193: Peptidase
M16 inactive domain
Length = 1080
Score = 30.3 bits (65), Expect = 0.26
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 51 SLNLSDIPEKNKEISTE----NTYDTSTDSGFTTSIYYDDELFNRSGVSAQLL 99
SLNLSDIP++ + TE N + FT +I Y + +F+ V +LL
Sbjct: 623 SLNLSDIPKEPIYVPTEVGDINGVKVLRNDLFTNNILYTEVVFDMGSVKHELL 675
>At1g49630.2 68414.m05565 peptidase M16 family protein / insulinase
family protein contains Pfam domain, PF05193: Peptidase
M16 inactive domain
Length = 1080
Score = 30.3 bits (65), Expect = 0.26
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 51 SLNLSDIPEKNKEISTE----NTYDTSTDSGFTTSIYYDDELFNRSGVSAQLL 99
SLNLSDIP++ + TE N + FT +I Y + +F+ V +LL
Sbjct: 623 SLNLSDIPKEPIYVPTEVGDINGVKVLRNDLFTNNILYTEVVFDMGSVKHELL 675
>At1g49630.1 68414.m05564 peptidase M16 family protein / insulinase
family protein contains Pfam domain, PF05193: Peptidase
M16 inactive domain
Length = 1080
Score = 30.3 bits (65), Expect = 0.26
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 51 SLNLSDIPEKNKEISTE----NTYDTSTDSGFTTSIYYDDELFNRSGVSAQLL 99
SLNLSDIP++ + TE N + FT +I Y + +F+ V +LL
Sbjct: 623 SLNLSDIPKEPIYVPTEVGDINGVKVLRNDLFTNNILYTEVVFDMGSVKHELL 675
>At5g63780.1 68418.m08005 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 367
Score = 28.7 bits (61), Expect = 0.78
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Query: 44 KGNQNDTS---LNLSDIPE-KNKEISTENTYDTSTDSGFTT 80
K NQ +T+ +N D P KN+E++ E Y T +DSG T
Sbjct: 3 KENQLETTNCGVNDHDCPPVKNEELAAEARYSTDSDSGLPT 43
>At5g06700.1 68418.m00757 expressed protein strong similarity to
unknown protein (emb|CAB82953.1)
Length = 608
Score = 28.7 bits (61), Expect = 0.78
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 8 FEPVFSVIQPNKPATKPKAVAMD-TFPFSDKVTDENEKGNQNDTSLNLSDIPEKNKEIST 66
F +FS I PN +TKP + D T S T N + +L + PE + ++
Sbjct: 88 FSSIFSYILPNVTSTKPTNRSSDATDSLSVNATSPPLNSNSKNGTLQ-TPAPETHTPVAK 146
Query: 67 ENTYDTSTDSG 77
T+++ +G
Sbjct: 147 NTTFESPIVNG 157
>At2g27070.1 68415.m03252 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver domain
Length = 575
Score = 28.3 bits (60), Expect = 1.0
Identities = 16/86 (18%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Query: 2 HNMNKPFEPVFSVIQPNKPATKPKAVAMDTFPFSDKVTDENEKGNQNDTSLNLSDIPEKN 61
HN N + + PN+P T + M + ++ T + T NL ++P+
Sbjct: 408 HNFNTNMMSSYGSLTPNQPGTSHFSYGMQSVLNNENATYNPQPPANATTQPNLDELPQL- 466
Query: 62 KEISTENTYDTSTDSGFTTSIYYDDE 87
+ ++ N +++ + S + D+
Sbjct: 467 ENLNLYNDLGNTSELPYNISNFQSDD 492
>At4g19180.1 68417.m02830 nucleoside phosphatase family protein /
GDA1/CD39 family protein low similarity to SP|O18956
Ectonucleoside triphosphate diphosphohydrolase 1 (EC
3.6.1.5) (Ecto-apyrase) {Bos taurus}; contains Pfam
profile PF01150: GDA1/CD39 (nucleoside phosphatase)
family
Length = 740
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 28 AMDTFPFSDKVTDENEKGNQNDTSLNLSDIPEKNKEISTENTYDTSTDSGFTTSIYY 84
A+D S +VT ENE+ N+T+LNL I N +S + + F S+ +
Sbjct: 310 ALDLGGSSLQVTFENEERTHNETNLNLR-IGSVNHHLSAYSLAGYGLNDAFDRSVVH 365
>At3g62690.1 68416.m07042 zinc finger (C3HC4-type RING finger)
family protein (ATL5) identical to RING-H2 zinc finger
protein ATL5 [Arabidopsis thaliana]
gi|4928401|gb|AAD33583
Length = 257
Score = 27.5 bits (58), Expect = 1.8
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 15 IQPNKPATKPKAVAMDTFPFSDKVTDENEKGNQNDTSLNLSDIPEKN 61
+QP +P T+P+ VA FP S K ++ E G+ + + + S P +
Sbjct: 158 VQPAQPVTEPEPVAA-VFP-SVKPIEDTEAGSSSSSDESESSTPSSS 202
>At4g22680.1 68417.m03273 myb family transcription factor (MYB85)
similar to myb DNA-binding protein GI:1020155 from
[Arabidopsis thaliana]
Length = 266
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 36 DKVTDENEKGNQNDTSLNLSDIPEKNKEISTENTYDTSTDSGFTTSIYYDDELFN 90
D V+ E + N ++++ E++ T+ ++ +IY DDELF+
Sbjct: 147 DDVSVEPKTTNTKYVEISVTTTEEESSSTVTDQNSSMDNENHLIDNIYDDDELFS 201
>At3g61850.2 68416.m06946 Dof zinc finger protein DAG1 / Dof
affecting germination 1 (DAG1) / transcription factor
BBFa (BBFA) identical to SP|Q43385 DOF zinc finger
protein DAG1 (Dof affecting germination 1)
(Transcription factor BBFa) (AtBBFa) (rolB domain B
factor a) {Arabidopsis thaliana}
Length = 284
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 6 KPFEPVFSVIQPNKPATKPKAVAMDTFPFSDKVTDENEKGNQNDTS 51
KP E + S N P +P +A +T P + ++ GN N+T+
Sbjct: 5 KPMEQMISSTNNNTPQQQPTFIATNTRP-NATASNGGSGGNTNNTA 49
>At3g61850.1 68416.m06945 Dof zinc finger protein DAG1 / Dof
affecting germination 1 (DAG1) / transcription factor
BBFa (BBFA) identical to SP|Q43385 DOF zinc finger
protein DAG1 (Dof affecting germination 1)
(Transcription factor BBFa) (AtBBFa) (rolB domain B
factor a) {Arabidopsis thaliana}
Length = 296
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 6 KPFEPVFSVIQPNKPATKPKAVAMDTFPFSDKVTDENEKGNQNDTS 51
KP E + S N P +P +A +T P + ++ GN N+T+
Sbjct: 17 KPMEQMISSTNNNTPQQQPTFIATNTRP-NATASNGGSGGNTNNTA 61
>At3g54800.1 68416.m06064 pleckstrin homology (PH) domain-containing
protein / lipid-binding START domain-containing protein
contains Pfam profiles PF00169: Pleckstring homology
(PH) domain, PF01852: Lipid-binding START domain
Length = 733
Score = 26.6 bits (56), Expect = 3.1
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 9 EPVFSVIQPNKPATKPKAVAMDTFPFS--DKVTD-ENEKGNQNDTSLNLSDIPEKNKEIS 65
+P S I T+ K V ++T DK T N + ND S D+PE N+
Sbjct: 389 KPCLSKINTMPLKTEAKEVDLETMHAEEMDKPTSARNSLMDLNDASDEFFDVPEPNESTE 448
Query: 66 TENTYDTS 73
++ D+S
Sbjct: 449 FDSFIDSS 456
>At2g20290.1 68415.m02370 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1493
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 63 EISTENTYDTSTDSGFTTSIYYDDELFNRSGVSAQLLASLVG 104
EI+ + + F Y DE++N VS ++AS+ G
Sbjct: 1399 EIANDLCPNLQIQQHFKLCTLYKDEIYNTKSVSQDVIASMTG 1440
>At5g38740.1 68418.m04685 MADS-box family protein contains
similarity to hypothetical proteins of [Arabidopsis
thaliana]
Length = 426
Score = 26.2 bits (55), Expect = 4.2
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 17 PNKPA-TKPKAVAMDTFPFSDKVTDENEKGNQNDTSLNLSDIPEKNKEISTENTYDTSTD 75
PNK T K V + +P +D + + LN+S E+ + + ++ +T D
Sbjct: 110 PNKKKKTSLKNVNVLKYPLADHYSPDQVSQLTQSLELNVSKFQERLRFLESQKQNETKPD 169
Query: 76 SGFTTSIYYDDELFNRSGVS 95
TSI ++ N S S
Sbjct: 170 HQSLTSISSLNQSLNPSQFS 189
>At4g17220.1 68417.m02590 expressed protein
Length = 513
Score = 26.2 bits (55), Expect = 4.2
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 36 DKVTDENEKGNQNDTSLNLSDIPEKNKEISTE---NTYDTSTDSGF 78
D+V + +E N T+ L+D E++ E TE N Y SGF
Sbjct: 378 DRVGESDEMENSKITANGLTDQHEEDSERKTEEDGNVYSEDMVSGF 423
>At3g19170.1 68416.m02434 peptidase M16 family protein / insulinase
family protein contains Pfam domain, PF05193: Peptidase
M16 inactive domain
Length = 1080
Score = 26.2 bits (55), Expect = 4.2
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 51 SLNLSDIPEKNKEISTE----NTYDTSTDSGFTTSIYYDDELFNRSGVSAQLL 99
SLNL DIP++ + TE N FT I Y + +F+ + +LL
Sbjct: 624 SLNLGDIPKEPTYVPTEVGDINGVKVLRHDLFTNDIIYTEVVFDIGSLKHELL 676
>At3g06980.1 68416.m00829 DEAD/DEAH box helicase, putative contains
Pfam profile: PF00270 DEAD/DEAH box helicase
Length = 781
Score = 26.2 bits (55), Expect = 4.2
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 62 KEISTENTYDTSTDSGFTTSIYYDDELFNRSGVSAQLLASL 102
+ + T ++YD STD GF D E S+ LL+S+
Sbjct: 45 RPLETSSSYDDSTDDGFVIISAADKENEFAPPPSSDLLSSI 85
>At2g33350.1 68415.m04088 hypothetical protein
Length = 440
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 39 TDENEKGNQNDTSLNLSDIPEKNKEISTENTYDTSTD 75
T EN N N+ + NL D + N +D+ D
Sbjct: 98 TTENSNNNNNNKNTNLQDDEDDNNNTDLSIIFDSQED 134
>At2g24700.1 68415.m02951 transcriptional factor B3 family protein
low similarity to reproductive meristem gene 1 from
[Brassica oleracea var. botrytis] GI:3170424,
[Arabidopsis thaliana] GI:13604227; contains Pfam
profile PF02362: B3 DNA binding domain
Length = 555
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/70 (21%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 25 KAVAMDTFPFSDKVTDENEKGNQNDTSLNLSDIPEKNKEISTENTYDTSTDSGFTTSIYY 84
KA DT PF++ + ++ +G + T + + + K +++N + T T + ++ +
Sbjct: 420 KASEKDTLPFAEPINEDIRQGQCSQT-IKQEYVSTEEKNSTSQNRFVTLTLT-HSSKLNL 477
Query: 85 DDELFNRSGV 94
E R+G+
Sbjct: 478 PFEFMKRNGI 487
>At1g48290.1 68414.m05394 expressed protein ; expression supported
by MPSS
Length = 444
Score = 26.2 bits (55), Expect = 4.2
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 18 NKPATKPKAVAMDTFPFSDKVTDEN--EKGNQNDTSLNLSDIPEKNKEISTENTYDTSTD 75
++P+T+P +D + N + N+ S + + E + E +EN + + D
Sbjct: 64 HEPSTRPSHSVVDNRRRKKSKQNGNRLDGDNRRKKSKSKQNGNESDGEGLSENDCNVTGD 123
Query: 76 SGFTTSIYYDDELFNRSGVSAQ 97
F Y D+E NR GV+ +
Sbjct: 124 DDFDEVHYADEEDGNRLGVTEE 145
>At5g41020.1 68418.m04986 myb family transcription factor contains
Pfam profile: PF00249 Myb DNA binding domain
Length = 588
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/64 (20%), Positives = 27/64 (42%)
Query: 14 VIQPNKPATKPKAVAMDTFPFSDKVTDENEKGNQNDTSLNLSDIPEKNKEISTENTYDTS 73
+++ K + KP + + K + + K + D+ + +K+KE S E D+
Sbjct: 71 IVKKKKKSKKPIRIDSEAVDAVKKKSKKRSKETKADSEAEDDGVEKKSKEKSKETKVDSE 130
Query: 74 TDSG 77
G
Sbjct: 131 AHDG 134
>At5g08200.1 68418.m00959 peptidoglycan-binding LysM
domain-containing protein contains Pfam profile PF01476:
LysM domain
Length = 409
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 41 ENEKGNQNDTSLNLSDIPEKNKEISTENTYDTST 74
E+E GN N S+NL D P + S + S+
Sbjct: 321 ESENGNFNPVSMNLMDAPVSDSFSSVRKSSSASS 354
>At4g27330.1 68417.m03921 sporocyteless (SPL) identical to
sporocyteless SPL (MADS-box related protein)
[Arabidopsis thaliana] gi|5566240|gb|AAD45344
Length = 314
Score = 25.8 bits (54), Expect = 5.5
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 39 TDENEKGNQNDTSLNLSDIPEKNKEISTENTYDTSTDSGFTT 80
TD+N GN ND N + + EI TE G T
Sbjct: 10 TDQNSVGNPNDLLRNTRLVVNSSGEIRTETLKSRGRKPGSKT 51
>At2g20430.1 68415.m02384 p21-rho-binding domain-containing protein
contains Pfam PF00786: P21-Rho-binding domain
Length = 203
Score = 25.8 bits (54), Expect = 5.5
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 17 PNKPATKPKAVAMDTFPFSDKVTDENEKGNQNDTSLNLSDIPEKNKEISTE 67
PN P + KA + P DK +D+ ++ + N + + S P++ E E
Sbjct: 88 PNLPKSTRKAASEKGSPTKDKSSDKTKRRSSNKGTSSSSRRPKEATEEQDE 138
>At1g05490.1 68414.m00559 C protein immunoglobulin-A-binding beta
antigen-related contains weak similarity to C protein
immunoglobulin-A-binding beta antigen [Streptococcus
agalactiae] gi|18028989|gb|AAL56250
Length = 731
Score = 25.8 bits (54), Expect = 5.5
Identities = 14/60 (23%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 30 DTFPFSDKVTDENEKGNQNDTSLNLSDIPEKNKEISTENTYDTSTDSGFTTSIYYDDELF 89
D+ +D+ +EN+ N+T N++ + + E + ++ +S+ S ++S DDE +
Sbjct: 249 DSSSETDEEEEENQDSEDNNTKDNVT-VESLSSEDPSSSSSSSSSSSSSSSSSSSDDESY 307
>At5g60650.1 68418.m07612 expressed protein ; expression
supported by MPSS
Length = 147
Score = 25.4 bits (53), Expect = 7.3
Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Query: 10 PVFSVIQPNKPATKPKAVAMDTFPFSDKVTDENEKGNQNDTSLNLSDIPEKNKEISTENT 69
PV N A P+A D F ++D N + + L+LS P K + ++
Sbjct: 28 PVHGPAYTNPSAFSPQAY--DFFHPKSSLSDHNNPPKSSPSPLSLSPSPSKTSIVEPDSQ 85
Query: 70 YDTSTDSGFTTS 81
+ TTS
Sbjct: 86 GSKVSSDEHTTS 97
>At5g55560.1 68418.m06923 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 314
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 1 MHNMNKPFEPVFSVIQPNKPATKPKAVAMDTFPFSDKV-TDENEKGNQNDTS 51
++ +N P F +P +P A + PF D + D++E G ND +
Sbjct: 255 LNKVNDPEAKAFIEKCIAQPRARPSAAELLCDPFFDGILDDDDEDGENNDNN 306
>At5g33290.1 68418.m03948 exostosin family protein contains Pfam
profile: PF03016 Exostosin family
Length = 500
Score = 25.4 bits (53), Expect = 7.3
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Query: 13 SVIQPNKPATKPKAVAMDTFPFSDKVTDENEKGNQNDTSLNLSDIPEKNKEISTENTYDT 72
S+ KPA KP + F S ++ E QN T+ + + NT +T
Sbjct: 27 SLFVSTKPANKPFLDYRNQFSISISISSPLE---QNTTNTSFVSASPPLSPLGQSNTTNT 83
Query: 73 STDSGFTTSIYYDDELFNRS 92
S ++S + D + N+S
Sbjct: 84 ILASSSSSSSFSDHQNQNKS 103
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 36 DKVTDENEKGNQNDTSLNLSDIPEKNKEISTEN 68
DK TD +EK D + + ++ K KE EN
Sbjct: 191 DKGTDMDEKVENGDENKQVENVEGKEKEDKEEN 223
>At4g08430.1 68417.m01392 Ulp1 protease family protein similar to
At5g45570, At5g28235; contains Pfam profile PF02902:
Ulp1 protease family, C-terminal catalytic domain
Length = 808
Score = 25.4 bits (53), Expect = 7.3
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 4 MNKPFEPVFSVIQPNKPATKPKAVAMDTFPFSDKVTDENEKGNQNDTSL 52
M K V V P KP K VA T F D V D +K N ++ +
Sbjct: 397 MKKTAVKVEKVDSP-KPEKKKSVVAPTTKTFDDDVVDVTDKVNADNLKM 444
>At3g60380.1 68416.m06753 expressed protein
Length = 743
Score = 25.4 bits (53), Expect = 7.3
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Query: 4 MNKPFEPVFSVIQPNKPATKPKAV-----AMDTFPFSDKVTDENEKGNQNDTSLNLSDIP 58
+++ F + V QP +A+ DT P D VT + E + D+P
Sbjct: 513 VSESFPALDVVFQPTNAKASRRAMRSSRGGRDTLPEKDVVTRKLEDDTVDSDKSRKKDLP 572
Query: 59 EKNKEISTE 67
K+KE+ +
Sbjct: 573 GKDKEMKLD 581
>At3g18720.1 68416.m02377 F-box family protein contains Pfam
PF00646: F-box domain
Length = 380
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 50 TSLNLSDIPEKNKEISTENTYDTSTDSGFTTSIYYD 85
TSL + +PE+ + I + D S T YYD
Sbjct: 331 TSLTRAGLPEEERNILYSSDIDDFVKSSHPTFYYYD 366
>At1g76710.2 68414.m08928 SET domain-containing protein (ASHH1) low
similarity to huntingtin interacting protein 1 [Homo
sapiens] GI:12697196; contains Pfam profile PF00856: SET
domain; identical to cDNA ASH1-like protein 1 (ASHH1)
partial cds GI:15488417
Length = 492
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 28 AMDTFPFSDKVTDENEKGNQNDTSLNLSDIPEKNKEISTENTYDTS 73
++D P D DE + N ++ EK K+ISTEN +++
Sbjct: 250 SVDKIPVYDSAEDELTSEPSKNGESNTNE--EKEKDISTENHLEST 293
>At1g76710.1 68414.m08927 SET domain-containing protein (ASHH1) low
similarity to huntingtin interacting protein 1 [Homo
sapiens] GI:12697196; contains Pfam profile PF00856: SET
domain; identical to cDNA ASH1-like protein 1 (ASHH1)
partial cds GI:15488417
Length = 492
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 28 AMDTFPFSDKVTDENEKGNQNDTSLNLSDIPEKNKEISTENTYDTS 73
++D P D DE + N ++ EK K+ISTEN +++
Sbjct: 250 SVDKIPVYDSAEDELTSEPSKNGESNTNE--EKEKDISTENHLEST 293
>At1g75260.1 68414.m08743 isoflavone reductase family protein
similar to SP|P52577 Isoflavone reductase homolog P3
(EC 1.3.1.-) {Arabidopsis thaliana}; contains Pfam
profile PF02716: Isoflavone reductase
Length = 593
Score = 25.4 bits (53), Expect = 7.3
Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Query: 7 PFEPVFSVIQPNKPATKPKA 26
PF P + QP+K TKPKA
Sbjct: 37 PFRPA-GIAQPSKSETKPKA 55
>At5g60150.1 68418.m07540 expressed protein ; expression supported
by MPSS
Length = 1195
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 33 PFSDKVTDENEKGNQNDTSLNLSDI 57
PFS+K T E +K +S N SD+
Sbjct: 833 PFSEKSTSEKQKQYNCSSSENTSDV 857
>At4g20850.1 68417.m03025 subtilase family protein contains similarity
to Tripeptidyl-peptidase II (EC 3.4.14.10) (TPP-II)
(Tripeptidyl aminopeptidase) (Swiss-Prot:P29144) [Homo
sapiens]
Length = 1380
Score = 25.0 bits (52), Expect = 9.6
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 10 PVFSVIQPNKPATKPKAVAMDTFPFSDKVTDENEKGNQNDTSLN-LSDIPEKNKEISTE 67
P+ V+ PNKP KA + P K E + DT + L ++ ++ +E +E
Sbjct: 1114 PISYVVPPNKPEEDKKAASA---PTCSKSVSERLEQEVRDTKIKFLGNLKQETEEERSE 1169
>At4g08750.1 68417.m01443 RNA recognition motif (RRM)-containing
protein contains Pfam domain PF00076: RNA recognition
motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 461
Score = 25.0 bits (52), Expect = 9.6
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 37 KVTDENEKGNQNDTSLNLSDIPEKNKEISTENTYDTSTDSGFTTSIYYDDEL 88
K +EK TS++ S + N+ ++ ++ T GF +S DD++
Sbjct: 309 KDNSHDEKKLDLPTSISYSADKDSNEVVTERGSFQTIYVEGFGSSFSEDDDI 360
>At3g57050.3 68416.m06352 cystathionine beta-lyase, chloroplast /
beta-cystathionase / cysteine lyase (CBL) identical to
SP|P53780 Cystathionine beta-lyase, chloroplast
precursor (EC 4.4.1.8) (CBL) (Beta-cystathionase)
(Cysteine lyase) {Arabidopsis thaliana}
Length = 378
Score = 25.0 bits (52), Expect = 9.6
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 37 KVTDENEKGNQNDTSLNLSDIPEKNKEISTENTYDTSTDSGFTTSI 82
KV +K N S L+ + EK+ + T +T + +TDS T +I
Sbjct: 36 KVPTWEKKQISNRNSFKLNCVMEKSVDGQTHSTVNNTTDSLNTMNI 81
>At3g57050.1 68416.m06350 cystathionine beta-lyase, chloroplast /
beta-cystathionase / cysteine lyase (CBL) identical to
SP|P53780 Cystathionine beta-lyase, chloroplast
precursor (EC 4.4.1.8) (CBL) (Beta-cystathionase)
(Cysteine lyase) {Arabidopsis thaliana}
Length = 464
Score = 25.0 bits (52), Expect = 9.6
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 37 KVTDENEKGNQNDTSLNLSDIPEKNKEISTENTYDTSTDSGFTTSI 82
KV +K N S L+ + EK+ + T +T + +TDS T +I
Sbjct: 36 KVPTWEKKQISNRNSFKLNCVMEKSVDGQTHSTVNNTTDSLNTMNI 81
>At3g10550.1 68416.m01266 expressed protein
Length = 634
Score = 25.0 bits (52), Expect = 9.6
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 42 NEKGNQNDTSLNLSDIPEKN 61
N GN +D S+++S +PE+N
Sbjct: 555 NRHGNNSDVSVSISLMPEEN 574
>At2g42980.1 68415.m05332 aspartyl protease family protein contains
pfam profile: PF00026 eukaryotic aspartyl protease
Length = 527
Score = 25.0 bits (52), Expect = 9.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 56 DIPEKNKEISTENTYDTSTDSGFTTSIY 83
DIPE+ IS++ T DSG T S +
Sbjct: 382 DIPEETWNISSDGDGGTIIDSGTTLSYF 409
>At2g31280.1 68415.m03819 basic helix-loop-helix (bHLH)
protein-related identical to cDNA bHLH transcription
factor (bHLH gamma gene) GI:32562999; weak similarity to
bHLH transcription activator anthocyanin 1 [Petunia x
hybrida] GI:10998404
Length = 720
Score = 25.0 bits (52), Expect = 9.6
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 49 DTSLNLSDIPEKNKEISTENTYDTSTDSGFTTSI 82
DT N SDI I +TY +S+ F TS+
Sbjct: 501 DTQQNSSDICGAFSSIGFSSTYPSSSSDQFQTSL 534
>At2g28800.1 68415.m03501 chloroplast membrane protein (ALBINO3)
Oxa1p homolog {PMID:11148275}; identical to chloroplast
membrane protein ALBINO3 [Arabidopsis thaliana]
GI:2209332
Length = 462
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 16 QPNKPATKPKAVAMDTFPFSDKVTDENEKGNQND 49
+ K + K KAVA DT ++ E+E+G+ ++
Sbjct: 394 EQEKRSKKNKAVAKDTVELVEESQSESEEGSDDE 427
>At2g16270.1 68415.m01863 expressed protein and genefinder;
expression supported by MPSS
Length = 759
Score = 25.0 bits (52), Expect = 9.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 26 AVAMDTFPFSDKVTDENEKGNQNDTSLNLSDIPEKN 61
AVA F K+ + +++ LNLS +PE+N
Sbjct: 615 AVASFVFAKKTKLVAATKPAPESNMELNLSHVPEEN 650
>At2g13150.1 68415.m01450 expressed protein contains a bZIP
transcription factor basic domain signature (PDOC00036)
Length = 262
Score = 25.0 bits (52), Expect = 9.6
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 53 NLSDIPEKNKEISTENTYD---TSTDSGFTTSIYYDDELFNRSGVSAQL 98
+L +P +S+ + D +++ F TS+Y DDEL N+ S +L
Sbjct: 96 DLLKLPPSPNNVSSSRSVDGEQNASELEFDTSVYTDDEL-NKIAKSTKL 143
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.307 0.126 0.347
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,639,661
Number of Sequences: 28952
Number of extensions: 106664
Number of successful extensions: 353
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 325
Number of HSP's gapped (non-prelim): 49
length of query: 104
length of database: 12,070,560
effective HSP length: 71
effective length of query: 33
effective length of database: 10,014,968
effective search space: 330493944
effective search space used: 330493944
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 52 (25.0 bits)
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