Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000343-TA|BGIBMGA000343-PA|IPR000618|Insect cuticle
protein
         (118 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    25   0.26 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    25   0.26 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   3.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        20   5.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   5.5  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    20   5.5  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        20   7.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    19   9.7  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 0.26
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 22  KDDNVQLLKFDSDNDGLGSYRFLYEQTDGSKRDEQGEVINVGTDDESIVIKGSYSWVAPD 81
           KD N  L  +D     +    +++E  D ++R      +N G D ES++I G   +  P+
Sbjct: 267 KDPNSHLYDYDLTTHVMLLSDWMHE--DATERFPGRLAVNTGQDPESLLINGKGQFRDPN 324


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 24.6 bits (51), Expect = 0.26
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 22  KDDNVQLLKFDSDNDGLGSYRFLYEQTDGSKRDEQGEVINVGTDDESIVIKGSYSWVAPD 81
           KD N  L  +D     +    +++E  D ++R      +N G D ES++I G   +  P+
Sbjct: 267 KDPNSHLYDYDLTTHVMLLSDWMHE--DATERFPGRLAVNTGQDPESLLINGKGQFRDPN 324


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 3.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 62  VGTDDESIVIKGSY 75
           +  DDES +I+G Y
Sbjct: 222 ISNDDESDIIQGGY 235



 Score = 20.2 bits (40), Expect = 5.5
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query: 65   DDESIVIKGSYSWVAPDGITYTVTYVADDKGFQPSIEQG 103
            D E++++K   SW   D   Y        KG + S+  G
Sbjct: 1438 DFENLIVKAHDSWADFDNQFYKRVTGYKAKGIKVSLALG 1476


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 82 GITYTVTYVADDKGFQP 98
          G TY  T  +D+ GF P
Sbjct: 21 GTTYKYTGCSDNDGFLP 37


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 94  KGFQPSIEQGPGGAIPSSVIASL 116
           KGF P  +   G   PSS  +SL
Sbjct: 62  KGFHPWKKSPQGAPSPSSTPSSL 84


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
          protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 2  MKLLVLFSFLALAHSAP 18
          M+++ L  FLAL H+ P
Sbjct: 1  MRVVPLAIFLALCHAEP 17


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 83  ITYTVTYVADDKGFQPSIEQGPGGAIPSSVI 113
           I+  +  +  D  F  S     GG IP ++I
Sbjct: 22  ISDVIEVIETDPDFHESTMFNGGGEIPQNII 52


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory
          receptor candidate 49 protein.
          Length = 418

 Score = 19.4 bits (38), Expect = 9.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)

Query: 5  LVLFSFLALAHSAPQGP 21
          LVL  +L + HS P+ P
Sbjct: 30 LVLNKYLLVKHSKPKMP 46


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.314    0.136    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,930
Number of Sequences: 317
Number of extensions: 1420
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 118
length of database: 114,650
effective HSP length: 50
effective length of query: 68
effective length of database: 98,800
effective search space:  6718400
effective search space used:  6718400
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.1 bits)
S2: 38 (19.4 bits)