BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000343-TA|BGIBMGA000343-PA|IPR000618|Insect cuticle
protein
(118 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50469-1|AAA93473.1| 160|Anopheles gambiae protein ( Anopheles ... 34 0.002
AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform ... 25 0.70
AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform ... 25 0.70
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 23 2.1
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 2.8
AF026493-1|AAB81851.1| 112|Anopheles gambiae chitinase protein. 23 2.8
X87410-1|CAA60857.1| 498|Anopheles gambiae maltase-like protein... 23 3.7
DQ999006-1|ABJ99082.1| 282|Anopheles gambiae voltage-dependent ... 22 4.9
AY137768-1|AAN16031.1| 282|Anopheles gambiae porin protein. 22 4.9
AY082909-1|AAL89811.1| 282|Anopheles gambiae porin protein. 22 4.9
AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 21 8.6
>U50469-1|AAA93473.1| 160|Anopheles gambiae protein ( Anopheles
gambiae putativecuticle protein mRNA, partial cds. ).
Length = 160
Score = 33.9 bits (74), Expect = 0.002
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 70 VIKGSYSWVAPDGITYTVTYVAD-DKGFQPSIEQGP 104
V++GSYS V PDG TV Y AD GF + + P
Sbjct: 48 VVQGSYSVVDPDGTKRTVDYTADPHNGFNAVVRREP 83
>AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform B
protein.
Length = 755
Score = 25.0 bits (52), Expect = 0.70
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 22 KDDNVQLLKFDSDNDGLGSYRFLYEQTDGSKRDEQGEVINVGTDDESIVIKGSYSWVAPD 81
+D N L FD + +L+E D ++R +N G D ES++I G + P+
Sbjct: 309 RDPNSHLYDFDLTTHIMLVSDWLHE--DAAERYPGRLAVNTGQDPESLLINGKGQFRDPN 366
>AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform A
protein.
Length = 753
Score = 25.0 bits (52), Expect = 0.70
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 22 KDDNVQLLKFDSDNDGLGSYRFLYEQTDGSKRDEQGEVINVGTDDESIVIKGSYSWVAPD 81
+D N L FD + +L+E D ++R +N G D ES++I G + P+
Sbjct: 309 RDPNSHLYDFDLTTHIMLVSDWLHE--DAAERYPGRLAVNTGQDPESLLINGKGQFRDPN 366
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 23.4 bits (48), Expect = 2.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 18 PQGPKDDNVQLLKFDSD 34
P+GPKDDN + D D
Sbjct: 691 PEGPKDDNTRETIDDQD 707
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 94 KGFQPSIEQGPGGAIPSSV 112
+G++ SI + PGGAI ++V
Sbjct: 1835 EGYRQSIVERPGGAIRATV 1853
>AF026493-1|AAB81851.1| 112|Anopheles gambiae chitinase protein.
Length = 112
Score = 23.0 bits (47), Expect = 2.8
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 65 DDESIVIKGSYSWVAPDGITYTVTYVADDKGFQPSIEQG 103
D ++ IK SW D YT A +KG + ++ G
Sbjct: 32 DYSTLTIKTHDSWADIDNKFYTRVVAAKEKGVKVTLAIG 70
>X87410-1|CAA60857.1| 498|Anopheles gambiae maltase-like protein
Agm1 protein.
Length = 498
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 32 DSDNDGLGSYRFLYEQTDGSKRD 54
DSD DG+G R + E+ +R+
Sbjct: 39 DSDGDGVGDLRGIMEKVPYLRRE 61
>DQ999006-1|ABJ99082.1| 282|Anopheles gambiae voltage-dependent
anion channel protein.
Length = 282
Score = 22.2 bits (45), Expect = 4.9
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 50 GSKRD-EQGEVINVGTDDESIVIKGSYSWVAPDGITYTVTYVADDKGF 96
G+K D ++ + +++S + G Y DGIT T++ + D K F
Sbjct: 221 GAKYDLDKDACVRAKVNNQSQIGLG-YQQKLRDGITLTLSTLVDGKNF 267
>AY137768-1|AAN16031.1| 282|Anopheles gambiae porin protein.
Length = 282
Score = 22.2 bits (45), Expect = 4.9
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 50 GSKRD-EQGEVINVGTDDESIVIKGSYSWVAPDGITYTVTYVADDKGF 96
G+K D ++ + +++S + G Y DGIT T++ + D K F
Sbjct: 221 GAKYDLDKDACVRAKVNNQSQIGLG-YQQKLRDGITLTLSTLVDGKNF 267
>AY082909-1|AAL89811.1| 282|Anopheles gambiae porin protein.
Length = 282
Score = 22.2 bits (45), Expect = 4.9
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 50 GSKRD-EQGEVINVGTDDESIVIKGSYSWVAPDGITYTVTYVADDKGF 96
G+K D ++ + +++S + G Y DGIT T++ + D K F
Sbjct: 221 GAKYDLDKDACVRAKVNNQSQIGLG-YQQKLRDGITLTLSTLVDGKNF 267
>AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative
transcription factor protein.
Length = 593
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 73 GSYSWVAPDGITYTVTYVADDKGFQP 98
G Y ++ DGI D GF+P
Sbjct: 28 GMYDNISNDGIPMDALAELQDTGFEP 53
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.314 0.136 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,905
Number of Sequences: 2123
Number of extensions: 5959
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 11
length of query: 118
length of database: 516,269
effective HSP length: 57
effective length of query: 61
effective length of database: 395,258
effective search space: 24110738
effective search space used: 24110738
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 43 (21.4 bits)
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