Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000342-TA|BGIBMGA000342-PA|IPR000618|Insect cuticle
protein, IPR010916|TonB box, N-terminal
(125 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0277 + 2060328-2061061,2061360-2061420,2061560-2061679,206... 31 0.27
05_07_0216 + 28461783-28461788,28461837-28462295,28463198-284633... 31 0.27
03_02_0846 + 11712530-11712740,11713974-11714055,11714127-117142... 31 0.36
03_05_0845 - 28155065-28155374,28156201-28156342,28156375-281565... 30 0.47
07_03_0765 - 21341872-21342198,21342482-21342635,21342716-213429... 28 1.9
04_04_1649 - 35046488-35047150 28 2.5
06_03_0377 - 20068716-20069190,20069205-20069413 27 3.3
09_02_0515 + 10121849-10122149,10132151-10132187,10132314-101327... 27 4.4
07_03_1557 - 27699675-27699972,27700546-27700630,27700741-277008... 27 5.8
09_02_0590 - 10978335-10978728,10978855-10979044,10979130-109791... 26 7.7
03_06_0705 + 35647838-35647850,35647966-35648105,35648439-356488... 26 7.7
>11_01_0277 +
2060328-2061061,2061360-2061420,2061560-2061679,
2061947-2062112,2062229-2062635
Length = 495
Score = 31.1 bits (67), Expect = 0.27
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 7 IVKEPSFKLLAL-CLVGIVATAPPPREVQILKYENVNSGRGSYKFGFG--QSDGTRFEQE 63
IV + + L A CL G+ A P P + Y ++++ G Y FGFG DGT+ +
Sbjct: 369 IVLDGGYYLTARWCLHGVKAEDPNPHQQN---YADIHAPVGYYVFGFGYRDMDGTKVHKA 425
Query: 64 GALKNEGQEHESLSVRGQFSWVGPDGVTY 92
Q + V G + + PDG Y
Sbjct: 426 WRSNYADQGYGEGDVLGFYIHL-PDGELY 453
>05_07_0216 +
28461783-28461788,28461837-28462295,28463198-28463315,
28463350-28463609,28465220-28465525
Length = 382
Score = 31.1 bits (67), Expect = 0.27
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 6/56 (10%)
Query: 23 IVATAPPPREVQILKYENVNSGRGSYKFGFGQSDGTRFEQEGALKNEGQEHESLSV 78
++ATAPP R + + E+V++G GS G G+S TR E+E A EG ESL+V
Sbjct: 222 MMATAPP-RTLYDVCAESVDAGEGSVPAGGGES--TRGEEEVAGAVEG---ESLAV 271
>03_02_0846 +
11712530-11712740,11713974-11714055,11714127-11714226,
11714311-11714406,11714492-11714542,11714685-11714750,
11715413-11715514,11716099-11716167,11716251-11716334,
11716531-11716626,11717216-11717268,11718808-11718945,
11719003-11719435
Length = 526
Score = 30.7 bits (66), Expect = 0.36
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 33 VQILKYENVNSGRGSYKFGFGQSDGTRFEQEGALKNEGQEHESLSVRG 80
V L ++ + +YKFGFG + G +E + N + H LS RG
Sbjct: 312 VNFLLSAEIDHSKKNYKFGFGMTVGDMYEMKSLTAN--RHHRWLSRRG 357
>03_05_0845 -
28155065-28155374,28156201-28156342,28156375-28156505,
28156591-28156784,28156859-28156969,28157234-28157399,
28157501-28157668,28157766-28158787
Length = 747
Score = 30.3 bits (65), Expect = 0.47
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 46 GSYKFGFGQSDGTRFEQEGALKNEGQEHESLSVRGQFSWVGPDGVTYTVTYVAD 99
G ++ G G RF EG E + GQ +VGPDG TY + AD
Sbjct: 66 GEWRRGKASGKG-RFSWPSGATFEG-EFRGGRIEGQGVFVGPDGATYRGAWAAD 117
>07_03_0765 -
21341872-21342198,21342482-21342635,21342716-21342953,
21343072-21343282,21343475-21343611,21347267-21348179
Length = 659
Score = 28.3 bits (60), Expect = 1.9
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 17 ALCLVGIVATAPPPREVQILKYENVNSGRGSY 48
A CLVG+ AP + Q + + N+ G+Y
Sbjct: 37 AACLVGVFLNAPHATDAQPMPWHRCNTSSGNY 68
>04_04_1649 - 35046488-35047150
Length = 220
Score = 27.9 bits (59), Expect = 2.5
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 41 VNSGRGSYKFGFGQSDG-TRFEQEGA 65
VN G+GSY +G DG RF+Q A
Sbjct: 190 VNDGKGSYGVNYGGGDGYFRFQQAAA 215
>06_03_0377 - 20068716-20069190,20069205-20069413
Length = 227
Score = 27.5 bits (58), Expect = 3.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 53 GQSDGTRFEQEGALKNEGQE 72
G SDG F+ EGA + EG E
Sbjct: 61 GDSDGVTFQGEGAAEGEGDE 80
>09_02_0515 +
10121849-10122149,10132151-10132187,10132314-10132790,
10133184-10133733
Length = 454
Score = 27.1 bits (57), Expect = 4.4
Identities = 16/46 (34%), Positives = 16/46 (34%)
Query: 38 YENVNSGRGSYKFGFGQSDGTRFEQEGALKNEGQEHESLSVRGQFS 83
Y NV G G Y F FE N E L GQFS
Sbjct: 136 YGNVGMGTGEYGFASPSQTPFSFEVLSEATNNFSEERLLREEGQFS 181
>07_03_1557 -
27699675-27699972,27700546-27700630,27700741-27700847,
27700942-27701135,27701252-27701368,27701466-27701631,
27701723-27701887,27702185-27703428
Length = 791
Score = 26.6 bits (56), Expect = 5.8
Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 46 GSYKFGFGQSDGTRFEQEGALKNEGQEHESLSVRGQFSWVGPDGVTY 92
G ++ G G +G + H + RG+FSW P G TY
Sbjct: 75 GQWRGGAPHGAGKYLWTDGCMYEGEWRHGKATGRGRFSW--PSGATY 119
>09_02_0590 -
10978335-10978728,10978855-10979044,10979130-10979198,
10980061-10980187,10980562-10980824,10980928-10981076,
10981186-10981260,10983391-10983462,10983554-10983692,
10983796-10984265,10985278-10985854,10986997-10987063
Length = 863
Score = 26.2 bits (55), Expect = 7.7
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 57 GTRFEQEGALKNEGQEHESLSVRGQFSWVGPDGVTYTVTYVADEDG 102
G + +G + G+ H+ +V +W GPD YTV +G
Sbjct: 43 GITYVPDGHYTDAGENHKVTTVYRN-AWWGPDRTLYTVRSFPSAEG 87
>03_06_0705 +
35647838-35647850,35647966-35648105,35648439-35648824,
35648930-35649110,35649498-35649590,35649667-35649806,
35649906-35650005
Length = 350
Score = 26.2 bits (55), Expect = 7.7
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 52 FGQSDGTRFEQEGALKNEGQEHESLSVRGQFSWVGPDGVTYTVTYVADEDGYQPEIEQG 110
FG++ G EGA G+ E+ G+ + V + V D +G + +E+G
Sbjct: 191 FGRAMGVGPSGEGAAAAGGEHEEAEEEGGEEGEYEDESVIHHTASVGDVEGLKKALEEG 249
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.135 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,481,152
Number of Sequences: 37544
Number of extensions: 191543
Number of successful extensions: 315
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 308
Number of HSP's gapped (non-prelim): 11
length of query: 125
length of database: 14,793,348
effective HSP length: 74
effective length of query: 51
effective length of database: 12,015,092
effective search space: 612769692
effective search space used: 612769692
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 55 (26.2 bits)
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