GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000342-TA|BGIBMGA000342-PA|IPR000618|Insect cuticle
protein, IPR010916|TonB box, N-terminal
         (125 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   2.0  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   2.6  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   2.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   4.6  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    20   6.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   6.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   6.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   6.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   6.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   8.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   8.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   8.1  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           20   8.1  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    20   8.1  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 89  GVTYTVTYVADEDGYQP 105
           G TY  T  +D DG+ P
Sbjct: 21  GTTYKYTGCSDNDGFLP 37


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)

Query: 41  VNSGRGSYKFGFGQSDGT 58
           +N G GSY  GF  +D T
Sbjct: 258 INLGLGSYGRGFALADPT 275


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)

Query: 41  VNSGRGSYKFGFGQSDGT 58
           +N G GSY  GF  +D T
Sbjct: 258 INLGLGSYGRGFALADPT 275


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 6/27 (22%), Positives = 13/27 (48%)

Query: 77  SVRGQFSWVGPDGVTYTVTYVADEDGY 103
           S+R +  W+  +G    + +  D D +
Sbjct: 408 SIRNKMKWIKDNGFAGAMVWTIDMDDF 434


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 20.2 bits (40), Expect = 6.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)

Query: 41  VNSGRGSYKFGFGQSDGT 58
           +N G G+Y  GF  +D T
Sbjct: 257 INLGLGTYGRGFALADPT 274


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 6.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 51   GFGQSDGTRFEQEGALK 67
            GF QS GT  + EG+++
Sbjct: 1094 GFLQSGGTSDDDEGSIE 1110


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 6.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 51   GFGQSDGTRFEQEGALK 67
            GF QS GT  + EG+++
Sbjct: 1094 GFLQSGGTSDDDEGSIE 1110


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 6.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 51   GFGQSDGTRFEQEGALK 67
            GF QS GT  + EG+++
Sbjct: 1094 GFLQSGGTSDDDEGSIE 1110


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 6.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 51   GFGQSDGTRFEQEGALK 67
            GF QS GT  + EG+++
Sbjct: 1094 GFLQSGGTSDDDEGSIE 1110


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 7/13 (53%), Positives = 8/13 (61%)

Query: 83  SWVGPDGVTYTVT 95
           +WVG DG  Y  T
Sbjct: 158 AWVGSDGSLYNHT 170


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query: 68  NEGQEHESLSVRGQFSWVGPD 88
           N GQ+ ESL + G+  +  P+
Sbjct: 304 NTGQDPESLLINGKGQFRDPN 324


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query: 68  NEGQEHESLSVRGQFSWVGPD 88
           N GQ+ ESL + G+  +  P+
Sbjct: 304 NTGQDPESLLINGKGQFRDPN 324


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 26  TAPPPREVQILKYENVN 42
           T PP    QI+ YE +N
Sbjct: 146 TPPPHYTYQIIPYEALN 162


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 8/18 (44%), Positives = 10/18 (55%)

Query: 17  ALCLVGIVATAPPPREVQ 34
           ALCL      + PP EV+
Sbjct: 256 ALCLTNKNLVSKPPHEVE 273


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.313    0.135    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,432
Number of Sequences: 317
Number of extensions: 1431
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of query: 125
length of database: 114,650
effective HSP length: 50
effective length of query: 75
effective length of database: 98,800
effective search space:  7410000
effective search space used:  7410000
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.5 bits)
S2: 39 (19.8 bits)