GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000341-TA|BGIBMGA000341-PA|IPR000618|Insect cuticle
protein
         (78 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    32   0.003
AF043433-1|AAC05656.1|  231|Anopheles gambiae putative pupal-spe...    26   0.18 
AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450 CY...    23   1.2  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    22   2.2  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    22   2.2  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            22   2.2  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           20   8.7  

>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
          gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 31.9 bits (69), Expect = 0.003
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 17 GTLKNEGQEEESLAVRGKFSWVGPDGVTYTVTFVAD-EDGYQPEIEQGP 64
          G  K++ +  +   V+G +S V PDG   TV + AD  +G+   + + P
Sbjct: 35 GDSKSQQESRDGDVVQGSYSVVDPDGTKRTVDYTADPHNGFNAVVRREP 83


>AF043433-1|AAC05656.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 25.8 bits (54), Expect = 0.18
 Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 14  EQEGTLKNEGQEEESLAVRGKFSWVGPDGVTYTVTFVAD-EDGYQPEIEQGPGGAVPSAI 72
           E  G +KN+ +      V G++S +  DG    V + AD   G+   +   P     +  
Sbjct: 93  EHTGDIKNQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTGFNAVVRPEPSAVKIAQP 152

Query: 73  LHSL 76
           +H +
Sbjct: 153 VHKV 156


>AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450
           CYP9L1 protein protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 25  EEESLAVRGKFSWVGPDGVTYTVTFVADEDGYQPEIEQ 62
           E E +A    F   G D +  ++TFV  E    PEI+Q
Sbjct: 320 ENEMIAQCLLFFLAGFDTIATSMTFVLYEVTLAPEIQQ 357


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 21  NEGQEEESLAVRGKFSWVGPD 41
           N GQ+ ESL + GK  +  P+
Sbjct: 346 NTGQDPESLLINGKGQFRDPN 366


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 21  NEGQEEESLAVRGKFSWVGPD 41
           N GQ+ ESL + GK  +  P+
Sbjct: 346 NTGQDPESLLINGKGQFRDPN 366


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)

Query: 54   DGYQPEIEQGPGGAVPSAI 72
            +GY+  I + PGGA+ + +
Sbjct: 1835 EGYRQSIVERPGGAIRATV 1853


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/33 (21%), Positives = 17/33 (51%)

Query: 14  EQEGTLKNEGQEEESLAVRGKFSWVGPDGVTYT 46
           +Q  + + + Q+++     G  +W G + + YT
Sbjct: 422 QQPQSQQQQQQQQQQQQQSGSATWSGSNTLNYT 454


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.311    0.134    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,355
Number of Sequences: 2123
Number of extensions: 3338
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 78
length of database: 516,269
effective HSP length: 52
effective length of query: 26
effective length of database: 405,873
effective search space: 10552698
effective search space used: 10552698
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (20.9 bits)
S2: 40 (20.2 bits)