GeneModel BLAST Result against celegans

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000341-TA|BGIBMGA000341-PA|IPR000618|Insect cuticle
protein
         (78 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132948-3|CAC51075.1|  129|Caenorhabditis elegans Hypothetical ...    27   1.6  
AF040649-5|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical ...    26   2.8  
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ...    26   2.8  
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ...    26   2.8  
AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical ...    26   2.8  
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ...    26   2.8  
AC024818-4|AAF60782.5|  457|Caenorhabditis elegans Hypothetical ...    25   4.8  
Z99279-3|CAB16495.1|  298|Caenorhabditis elegans Hypothetical pr...    25   6.4  
U50135-5|AAN63430.2|  346|Caenorhabditis elegans Hypothetical pr...    25   6.4  
Z81540-11|CAB04397.2|  191|Caenorhabditis elegans Hypothetical p...    25   8.4  

>AL132948-3|CAC51075.1|  129|Caenorhabditis elegans Hypothetical
          protein Y39B6A.3 protein.
          Length = 129

 Score = 27.1 bits (57), Expect = 1.6
 Identities = 11/39 (28%), Positives = 23/39 (58%)

Query: 24 QEEESLAVRGKFSWVGPDGVTYTVTFVADEDGYQPEIEQ 62
          Q+ ++ A++      G +G+TYT+ +  D+  +  E+EQ
Sbjct: 41 QQNDANALKIGVRQKGCNGLTYTLEYAKDKQKFDEEVEQ 79


>AF040649-5|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical
           protein F33H12.6 protein.
          Length = 1360

 Score = 26.2 bits (55), Expect = 2.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 41  DGVTYTVTFVADEDGYQPEIEQGP 64
           D +TY V F    DG+ P++E+ P
Sbjct: 270 DPLTYPVLFPNGTDGWHPDLEKRP 293


>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
           protein ZK250.9 protein.
          Length = 1466

 Score = 26.2 bits (55), Expect = 2.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 41  DGVTYTVTFVADEDGYQPEIEQGP 64
           D +TY V F    DG+ P++E+ P
Sbjct: 376 DPLTYPVLFPNGTDGWHPDLEKRP 399


>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
           protein Y16E11A.2 protein.
          Length = 1466

 Score = 26.2 bits (55), Expect = 2.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 41  DGVTYTVTFVADEDGYQPEIEQGP 64
           D +TY V F    DG+ P++E+ P
Sbjct: 376 DPLTYPVLFPNGTDGWHPDLEKRP 399


>AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical
           protein Y46B2A.2 protein.
          Length = 1365

 Score = 26.2 bits (55), Expect = 2.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 41  DGVTYTVTFVADEDGYQPEIEQGP 64
           D +TY V F    DG+ P++E+ P
Sbjct: 286 DPLTYPVLFPNGTDGWHPDLEKRP 309


>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
           protein F59H6.5 protein.
          Length = 1486

 Score = 26.2 bits (55), Expect = 2.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 41  DGVTYTVTFVADEDGYQPEIEQGP 64
           D +TY V F    DG+ P++E+ P
Sbjct: 376 DPLTYPVLFPNGTDGWHPDLEKRP 399


>AC024818-4|AAF60782.5|  457|Caenorhabditis elegans Hypothetical
           protein Y54H5A.4 protein.
          Length = 457

 Score = 25.4 bits (53), Expect = 4.8
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 14  EQEGTLKNEGQEEESLAVRGKFSWVGPDG 42
           ++ G ++N  +EE+ L+   K S +G DG
Sbjct: 273 DEAGDVENRSEEEQWLSALSKGSVIGDDG 301


>Z99279-3|CAB16495.1|  298|Caenorhabditis elegans Hypothetical
          protein Y57G11A.3 protein.
          Length = 298

 Score = 25.0 bits (52), Expect = 6.4
 Identities = 10/26 (38%), Positives = 17/26 (65%)

Query: 7  QSDGTVFEQEGTLKNEGQEEESLAVR 32
          Q    +FE +G +K+E +EEE  A++
Sbjct: 35 QLKSALFENKGPVKDEAREEELAALK 60


>U50135-5|AAN63430.2|  346|Caenorhabditis elegans Hypothetical
          protein C52E12.6 protein.
          Length = 346

 Score = 25.0 bits (52), Expect = 6.4
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 9  DGTVFEQEGTLKNEGQEEESLAVRGKFSWVGP 40
          D   F++E  +K E +EEE    RG+ S V P
Sbjct: 38 DDLQFQEEFVVKEEEEEEELSLERGESSNVHP 69


>Z81540-11|CAB04397.2|  191|Caenorhabditis elegans Hypothetical
          protein F46B3.14 protein.
          Length = 191

 Score = 24.6 bits (51), Expect = 8.4
 Identities = 10/18 (55%), Positives = 11/18 (61%)

Query: 55 GYQPEIEQGPGGAVPSAI 72
          GY   +E G GG VPS I
Sbjct: 78 GYHCAVENGQGGCVPSNI 95


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.311    0.134    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,188,054
Number of Sequences: 27539
Number of extensions: 83092
Number of successful extensions: 109
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99
Number of HSP's gapped (non-prelim): 10
length of query: 78
length of database: 12,573,161
effective HSP length: 58
effective length of query: 20
effective length of database: 10,975,899
effective search space: 219517980
effective search space used: 219517980
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 51 (24.6 bits)