Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000339-TA|BGIBMGA000339-PA|IPR000618|Insect cuticle
protein
(296 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1322.14c |vtc4||vacuolar transporter chaperone |Schizosaccha... 30 0.35
SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr 1||... 30 0.46
SPCC285.09c |cgs2|pde1|cAMP-specific phosphodiesterase Cgs2|Schi... 29 0.60
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 29 0.80
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 29 1.1
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 27 4.3
SPAPB17E12.04c |csn2||COP9/signalosome complex subunit Csn2 |Sch... 26 5.6
SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|ch... 26 5.6
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 25 9.8
>SPCC1322.14c |vtc4||vacuolar transporter chaperone
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 30.3 bits (65), Expect = 0.35
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 158 RFKTIDETEKDETA-YFNEDGDLVVVGYYSYVDPEGKIHYVPYRAD-KTGFHIEK 210
R K I ++ ET F E + V+ YV P GK YVP R + KT F +E+
Sbjct: 575 RLKDIKDSFFLETVPKFEEPTEPTVIYEQKYVSPPGKRIYVPVRVEPKTYFALER 629
>SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 753
Score = 29.9 bits (64), Expect = 0.46
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 10/106 (9%)
Query: 136 HGNDIIYNEFVNENIDKGEYSYRFKTIDETEKD----ETAYFNEDGDLVVVGYYSYV-DP 190
H I + +N ++ YS ++ D+T+ D ++ Y G + + DP
Sbjct: 36 HRAACIKRKSINLSLPSNSYSLSYRQSDDTDGDVSESQSEYRLSSGRRSRASFARALQDP 95
Query: 191 EGKIHYVPYRADKTGFHIEKISSGSFNLPNAIVASLLGGYETSEGS 236
+ P + H S GSFNLPN+ ++ L G T+ S
Sbjct: 96 Q-----TPNTPPVSSQHRRFFSEGSFNLPNSNMSHSLNGDSTASNS 136
>SPCC285.09c |cgs2|pde1|cAMP-specific phosphodiesterase
Cgs2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 346
Score = 29.5 bits (63), Expect = 0.60
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 12 HIFIAVVNSAPIKDESLAEIIENNYTIDVKGNYVFS 47
HI+ AV+NSA ++ I+ NY ID +VF+
Sbjct: 119 HIYGAVINSAMFGPQNPRTIVGLNYVIDTLKKHVFN 154
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 29.1 bits (62), Expect = 0.80
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 138 NDIIYNEFVNENIDKGEYSY-RFKTIDETEKDETAYFNEDGD 178
+DI NE+ ++ G SY R + +DE E+++ N++GD
Sbjct: 225 DDINNNEYKDDESSSGSESYERDEDVDEEEEEDDDENNDEGD 266
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 143 NEFVNENIDKGEYSYRFKTIDETEKDETAYFNED 176
N F + DKG + FK++DET +F D
Sbjct: 377 NSFFSRTPDKGTRKFTFKSLDETMLAPLGFFRPD 410
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1465
Score = 26.6 bits (56), Expect = 4.3
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 106 KDMTMNV--PFLFVLVVCIVQSLTEGQPLDGAHGNDIIYNEFVNENIDKGEYSYRFKTID 163
+D+ N+ P F+ C+V + L A D IY + ++KG Y + F + +
Sbjct: 740 RDLIKNLFGPEGFLRTHCVVLTTNSLNVLKEA---DSIYILSNGKIVEKGNYEHLFVSTN 796
Query: 164 ETEKDETAYFNEDGDLVVVGYYSYVDPEGKIHYVP 198
K + + FN++ D + ++ P +I P
Sbjct: 797 SELKQQLSEFNDEKDTQPLPEHTTSYPSTQISLAP 831
Score = 25.8 bits (54), Expect = 7.4
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 12 HIFIAVVNSAPIKDESLAEIIENNYTIDVKGNYVFSFKTTNDLIRYE 58
H + NS + E+ + I +N I KGNY F +TN ++ +
Sbjct: 756 HCVVLTTNSLNVLKEADSIYILSNGKIVEKGNYEHLFVSTNSELKQQ 802
>SPAPB17E12.04c |csn2||COP9/signalosome complex subunit Csn2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 437
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/49 (24%), Positives = 28/49 (57%)
Query: 123 VQSLTEGQPLDGAHGNDIIYNEFVNENIDKGEYSYRFKTIDETEKDETA 171
++ +T + + + +DI+ ++F+ + +DK YS R + + E K T+
Sbjct: 322 IRDITAVERILQTYQHDILDDDFIRQYVDKILYSIRSQVLIELVKPYTS 370
>SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 979
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 168 DETAYFNEDGDLVVVGYYSY 187
DE A FN++G+ V G +SY
Sbjct: 810 DEEAIFNQNGESFVTGNFSY 829
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 25.4 bits (53), Expect = 9.8
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 127 TEGQPLDGAHGNDIIYNEFVNE-NIDKGEYSYRFKTIDETEKDETAY 172
T P G + D F+N +ID E SY F TID + + Y
Sbjct: 1612 TTRTPSLGIYTTDAQLRNFLNRISIDAYEESYSFSTIDIQSFENSIY 1658
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.139 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,445,947
Number of Sequences: 5004
Number of extensions: 64996
Number of successful extensions: 160
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 152
Number of HSP's gapped (non-prelim): 10
length of query: 296
length of database: 2,362,478
effective HSP length: 72
effective length of query: 224
effective length of database: 2,002,190
effective search space: 448490560
effective search space used: 448490560
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 53 (25.4 bits)
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