Silkworm BLAST Result against celegans

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000339-TA|BGIBMGA000339-PA|IPR000618|Insect cuticle
protein
         (296 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48621-2|CAA88547.1|  536|Caenorhabditis elegans Hypothetical pr...    33   0.32 
Z69383-4|CAA93411.2|  326|Caenorhabditis elegans Hypothetical pr...    31   0.98 
U97196-6|AAB52455.1|  373|Caenorhabditis elegans Hypothetical pr...    31   0.98 
Z93390-4|CAJ76953.1|  347|Caenorhabditis elegans Hypothetical pr...    31   1.3  
Z93390-3|CAB07676.1|  680|Caenorhabditis elegans Hypothetical pr...    31   1.3  
Z68315-2|CAA92668.1|  535|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z92806-4|CAB07259.1|  727|Caenorhabditis elegans Hypothetical pr...    28   9.2  
Z81461-1|CAB03833.1|  944|Caenorhabditis elegans Hypothetical pr...    28   9.2  
Z78540-2|CAB01737.1|  900|Caenorhabditis elegans Hypothetical pr...    28   9.2  
Z72506-4|CAA96619.1|  590|Caenorhabditis elegans Hypothetical pr...    28   9.2  

>Z48621-2|CAA88547.1|  536|Caenorhabditis elegans Hypothetical
           protein R07B1.3 protein.
          Length = 536

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 158 RFKTIDETEKDETAYFNEDGDLVVVGYYSYVDPEGKIHYVPYRADKT 204
           +F   + T  DE  Y     +L+ VG Y++++ E K +Y  + +DKT
Sbjct: 68  KFNLFNVTNPDEVKYLGAKPELIEVGGYAFLESEQKKYY-EFSSDKT 113


>Z69383-4|CAA93411.2|  326|Caenorhabditis elegans Hypothetical
           protein F13E9.9 protein.
          Length = 326

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 145 FVNENIDKGEYSYRFKTIDETEKDETAY--FNEDGD 178
           FVN   D  E  Y FK   + ++DET    FNED D
Sbjct: 71  FVNNEDDNDESYYNFKNSPKNKRDETRENDFNEDND 106


>U97196-6|AAB52455.1|  373|Caenorhabditis elegans Hypothetical
           protein B0207.7 protein.
          Length = 373

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 6/68 (8%)

Query: 126 LTEGQPLDGAHGNDIIYNEFVNENIDKGEYSYRFKTIDETEKDETAYFNEDGDLVVVGYY 185
           + E +P+D   G+      F+N + D  E        D+T  D  +Y NE  ++V +G  
Sbjct: 293 IDESEPMDFEEGSAFYEEHFLNNDTDSEE------DTDDTTTDLDSYENEKSNVVTIGTE 346

Query: 186 SYVDPEGK 193
           S    E K
Sbjct: 347 SDATQEDK 354


>Z93390-4|CAJ76953.1|  347|Caenorhabditis elegans Hypothetical
           protein T23B5.1b protein.
          Length = 347

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 4/93 (4%)

Query: 85  GEPVRVDYSATEEGYKIGDEQKDMTMNVPFLFVLVVCIVQSLTEGQPLDGAHGNDI-IYN 143
           G  V      T  G  I D  K    ++  +     C+V+   E +       N + +YN
Sbjct: 34  GFSVHFTSDLTGHGDNIIDSSKSRAWDLGIIPFKEPCLVKCDKEYEGSWKLLNNRLDVYN 93

Query: 144 EFVNENIDKGEYSYRFKT--IDETEK-DETAYF 173
           +F +EN+ K E S R++T  +D+ +K  + +YF
Sbjct: 94  DFYDENLQKHEDSLRYETASLDQLQKIRDDSYF 126


>Z93390-3|CAB07676.1|  680|Caenorhabditis elegans Hypothetical
           protein T23B5.1a protein.
          Length = 680

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 4/93 (4%)

Query: 85  GEPVRVDYSATEEGYKIGDEQKDMTMNVPFLFVLVVCIVQSLTEGQPLDGAHGNDI-IYN 143
           G  V      T  G  I D  K    ++  +     C+V+   E +       N + +YN
Sbjct: 367 GFSVHFTSDLTGHGDNIIDSSKSRAWDLGIIPFKEPCLVKCDKEYEGSWKLLNNRLDVYN 426

Query: 144 EFVNENIDKGEYSYRFKT--IDETEK-DETAYF 173
           +F +EN+ K E S R++T  +D+ +K  + +YF
Sbjct: 427 DFYDENLQKHEDSLRYETASLDQLQKIRDDSYF 459


>Z68315-2|CAA92668.1|  535|Caenorhabditis elegans Hypothetical
           protein F28C6.2 protein.
          Length = 535

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 19/73 (26%), Positives = 31/73 (42%)

Query: 25  DESLAEIIENNYTIDVKGNYVFSFKTTNDLIRYEEGIVVNSGEPNEHIEVYGYYSYINDA 84
           D+  A++      ++ + N+V + ++   L  Y    V +  EPNEHI      S     
Sbjct: 163 DQDSAQLPLTEQELNEEKNFVVNIESPGKLAHYFLPNVESEQEPNEHIPYPYAKSLFPTF 222

Query: 85  GEPVRVDYSATEE 97
           G PV  D +   E
Sbjct: 223 GVPVSSDGNVVAE 235


>Z92806-4|CAB07259.1|  727|Caenorhabditis elegans Hypothetical
           protein K10G4.4 protein.
          Length = 727

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 3/31 (9%)

Query: 85  GEPVRVDYSATEEG---YKIGDEQKDMTMNV 112
           G+P+ VD+S T E    +K+ DE+ D+ +N+
Sbjct: 204 GDPINVDHSETGEDIYKFKVMDEKHDIAINL 234


>Z81461-1|CAB03833.1|  944|Caenorhabditis elegans Hypothetical
           protein C04F12.1 protein.
          Length = 944

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 17/66 (25%), Positives = 27/66 (40%)

Query: 25  DESLAEIIENNYTIDVKGNYVFSFKTTNDLIRYEEGIVVNSGEPNEHIEVYGYYSYINDA 84
           D S   +  N Y        V+SF   N L++  + +  N GEP   I+    +  I   
Sbjct: 384 DASKPAVQVNQYNKREGRRMVYSFPIENLLVKPNQKLTQNHGEPPRSIKPELRFDLIRKV 443

Query: 85  GEPVRV 90
           GE  ++
Sbjct: 444 GESAKL 449


>Z78540-2|CAB01737.1|  900|Caenorhabditis elegans Hypothetical
           protein C33G3.4 protein.
          Length = 900

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 7/100 (7%)

Query: 53  DLIRYEEGIVVNSGEPNEHIEVYGYYSYINDAGEPVRV-DYSATEEGYKIGDEQKDMTMN 111
           D I     ++V SG       + G++   ++  E  +V DY    +  ++    K +   
Sbjct: 447 DRISQHTSVIVFSGNNENEAAIRGHWWKASNYTESQQVKDYVLLYQ--RLAKIAKKVAPT 504

Query: 112 VPFLFVLVVCIVQSLTEG----QPLDGAHGNDIIYNEFVN 147
           +PF+       V++  EG     P D  +G+   YNEFVN
Sbjct: 505 IPFIMSSPSNGVETEEEGGVSKNPYDVRYGDIHYYNEFVN 544


>Z72506-4|CAA96619.1|  590|Caenorhabditis elegans Hypothetical
           protein F07A5.3 protein.
          Length = 590

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 158 RFKTIDETEKDETAYFNEDGDLVVVGYYSYVDPEGKIHYVPYRADKT 204
           +F   + T  DE  Y++   +LV +G +S ++ E K  Y+ +  DK+
Sbjct: 71  KFYFFNVTNPDEVKYYSAAPNLVEIGPFSVMESEQK-KYLEFSDDKS 116


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.317    0.139    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,708,168
Number of Sequences: 27539
Number of extensions: 352116
Number of successful extensions: 847
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 842
Number of HSP's gapped (non-prelim): 10
length of query: 296
length of database: 12,573,161
effective HSP length: 81
effective length of query: 215
effective length of database: 10,342,502
effective search space: 2223637930
effective search space used: 2223637930
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)