Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000338-TA|BGIBMGA000338-PA|IPR000618|Insect cuticle
protein, IPR000437|Prokaryotic membrane lipoprotein lipid attachment
site
(154 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0730 - 23948801-23949079,23949528-23949588,23949828-239499... 36 0.014
09_04_0512 + 18226981-18227143,18227648-18229555,18229649-182302... 29 1.7
03_01_0401 - 3108477-3108689,3108787-3108933,3109022-3109234,310... 29 2.2
07_01_0639 - 4785446-4786186,4786429-4786656,4786727-4786872,478... 28 2.9
02_05_0437 - 28986459-28986524,28986606-28986731,28986842-289869... 28 2.9
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 28 3.8
07_03_0602 + 19881998-19882217,19882303-19882496,19883719-198840... 28 3.8
01_06_0090 + 26358051-26359157,26359582-26359701,26359968-263600... 28 3.8
03_05_0967 + 29265465-29266214,29267718-29267944,29268428-292685... 27 8.9
02_04_0536 + 23730396-23731736 27 8.9
>06_03_0730 -
23948801-23949079,23949528-23949588,23949828-23949954,
23950449-23950485,23950987-23951061,23951489-23951598,
23952700-23952754,23952833-23952949,23953201-23953355,
23953577-23953634,23954239-23954460
Length = 431
Score = 35.9 bits (79), Expect = 0.014
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 54 GNGIAAQEQGYLKNAGAKDAEAQVAQGSFTYTSPEGIPISVSYVADENGFRPEGAHLPTP 113
G+G+ G+ +A K E Q + G T + EG +Y +D G P A P P
Sbjct: 350 GSGLHESVAGWALDARRKKEEQQSSHGGATTGATEGS----NYRSDHFGASPRSALAPPP 405
Query: 114 PPIPEAI 120
PP P+ +
Sbjct: 406 PPSPDLV 412
>09_04_0512 +
18226981-18227143,18227648-18229555,18229649-18230295,
18230710-18231949,18232085-18232419,18232500-18232577,
18232872-18232978,18233020-18233062
Length = 1506
Score = 29.1 bits (62), Expect = 1.7
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 73 AEAQVAQGSFTYTSPEGIPISVSYVADENGFRPEGAHLPT 112
A V S Y+ I IS SYV+D+NG + AH P+
Sbjct: 936 ASQSVILNSENYSRENSITISASYVSDQNG---DQAHAPS 972
>03_01_0401 -
3108477-3108689,3108787-3108933,3109022-3109234,
3109321-3109938,3110045-3110584,3110941-3111041,
3111208-3111325,3111450-3111535,3111888-3112002
Length = 716
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 84 YTSPEGIPISVSYVAD--ENGFRPEGAHLPTPPPIP 117
Y +P+G+ I+ + D G+ P GA+ P P+P
Sbjct: 130 YVNPDGVEITPAVYGDIYGYGYAPYGAYSPASSPVP 165
>07_01_0639 -
4785446-4786186,4786429-4786656,4786727-4786872,
4786986-4787186,4787256-4787432,4787741-4788359
Length = 703
Score = 28.3 bits (60), Expect = 2.9
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Query: 70 AKDAEAQVAQGSFTYTSP--EGIPISVSYVADE--NGFRPEGAHLPTPPPIPEAILRALQ 125
+++ E Q +QG F E + + Y A F G P+PPP ++ LQ
Sbjct: 552 SREEEVQASQGRFEQARLILEELNVRAIYAAQALVRAFGSIGVQGPSPPPEDSSVAEKLQ 611
Query: 126 YIE 128
++E
Sbjct: 612 WVE 614
>02_05_0437 -
28986459-28986524,28986606-28986731,28986842-28986941,
28987583-28987660,28987857-28987937,28989488-28989624,
28989693-28989743,28989785-28989878,28990091-28990260
Length = 300
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 44 DGSYQFSYETGNGIAAQEQGYLKNAGAKDAEAQ 76
DGSY F++ T GI A++ G + A AE++
Sbjct: 171 DGSYYFAFYTTGGIEARDSGKIPEQHALLAESK 203
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 27.9 bits (59), Expect = 3.8
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Query: 75 AQVAQGSFTYTSPEGIPISVSYVADENGFRPEGAHLPTPPP 115
A VA GS +SP P V Y A G G PPP
Sbjct: 240 ASVAPGSIPTSSPSVAPAGVGYAATNQG---TGGPAAVPPP 277
>07_03_0602 +
19881998-19882217,19882303-19882496,19883719-19884039,
19885016-19885244,19885554-19885653,19886413-19886539,
19886603-19886780,19886859-19886917,19887082-19887568,
19887682-19887836,19887930-19888100,19888181-19888270,
19888714-19888872,19888940-19889223,19889435-19889498
Length = 945
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 106 EGAHLPTPPPIPEAILRALQYIE 128
E H+P PPP+ E ++R+L++ E
Sbjct: 677 ETHHVPEPPPLYEKLMRSLEHGE 699
>01_06_0090 +
26358051-26359157,26359582-26359701,26359968-26360099,
26360194-26360375,26360488-26360602,26362001-26362135,
26362261-26362395
Length = 641
Score = 27.9 bits (59), Expect = 3.8
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Query: 66 KNAGAKDAEAQVAQGSFTYTSPEGIPISVSYVADENGFRPEGAHLPTPPP-IPEAILRAL 124
+ A A DA+ + S ++ PE S S A+ G +P PPP +P A ++
Sbjct: 165 QEAAAADADDCSSTASVSHEQPE----SASSAANPASLVQRGPPIPPPPPPVPPAAFKSK 220
Query: 125 QYIES 129
Y S
Sbjct: 221 SYSAS 225
>03_05_0967 +
29265465-29266214,29267718-29267944,29268428-29268557,
29268651-29268719,29268803-29268946,29269775-29270011,
29270897-29270998,29271131-29271396,29271766-29273410,
29274449-29275018
Length = 1379
Score = 26.6 bits (56), Expect = 8.9
Identities = 16/56 (28%), Positives = 23/56 (41%)
Query: 45 GSYQFSYETGNGIAAQEQGYLKNAGAKDAEAQVAQGSFTYTSPEGIPISVSYVADE 100
GS E+ N I ++ LK E +GS + PEG P + AD+
Sbjct: 646 GSSAREVESSNEILPRQTTSLKRNNDSQREKNPDEGSESKDGPEGSPAAADEAADK 701
>02_04_0536 + 23730396-23731736
Length = 446
Score = 26.6 bits (56), Expect = 8.9
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 87 PEGIP-ISVSYVADENGFRPEGAHLPTPPPIP 117
P G P + V +ADE + HLP PP P
Sbjct: 98 PPGFPPLPVPGLADEPVYAAPARHLPPPPGFP 129
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.132 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,875,186
Number of Sequences: 37544
Number of extensions: 167462
Number of successful extensions: 643
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 637
Number of HSP's gapped (non-prelim): 12
length of query: 154
length of database: 14,793,348
effective HSP length: 76
effective length of query: 78
effective length of database: 11,940,004
effective search space: 931320312
effective search space used: 931320312
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 56 (26.6 bits)
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