GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000338-TA|BGIBMGA000338-PA|IPR000618|Insect cuticle
protein, IPR000437|Prokaryotic membrane lipoprotein lipid attachment
site
         (154 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    29   0.050
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   3.3  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    22   7.6  

>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 29.5 bits (63), Expect = 0.050
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 74  EAQVAQGSFTYTSPEGIPISVSYVAD-ENGF 103
           +  V QGS++   P+G   +V Y AD  NGF
Sbjct: 45  DGDVVQGSYSVVDPDGTKRTVDYTADPHNGF 75


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 8/15 (53%), Positives = 9/15 (60%)

Query: 103 FRPEGAHLPTPPPIP 117
           F P     PTPPP+P
Sbjct: 795 FTPPTDRTPTPPPLP 809


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 10/38 (26%), Positives = 16/38 (42%)

Query: 80  GSFTYTSPEGIPISVSYVADENGFRPEGAHLPTPPPIP 117
           G +   S +GIP+       + GF P+        P+P
Sbjct: 28  GMYDNISNDGIPMDALAELQDTGFEPQTRARSNTWPLP 65


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.132    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,947
Number of Sequences: 2123
Number of extensions: 5334
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 3
length of query: 154
length of database: 516,269
effective HSP length: 59
effective length of query: 95
effective length of database: 391,012
effective search space: 37146140
effective search space used: 37146140
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 45 (22.2 bits)