Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000337-TA|BGIBMGA000337-PA|IPR000618|Insect cuticle
protein
         (157 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    25   0.30 
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    25   0.40 

>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.0 bits (52), Expect = 0.30
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 13  TLAVFYAVHAQQHSINDPIPIIRYESDG-PNPDGSYKWLYETGNEINAEETGYVKNFGKG 71
           T     A+ + +  IND +   +  +    +P  + K+ Y +GN     ET   +NFG  
Sbjct: 384 TFRELVAMFSDRIFINDIVKTAKLMAKSMKSPTYALKFEYRSGNSWFEHETESGRNFGAA 443

Query: 72  EGEEV 76
             ++V
Sbjct: 444 HADDV 448


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.6 bits (51), Expect = 0.40
 Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 19  AVHAQQHSINDPIPIIRYESDG-PNPDGSYKWLYETGNEINAEETGYVKNFGKGEGEEV 76
           A+ + +  IND +   +  +    +P  + K+ Y +GN     ET   +NFG    ++V
Sbjct: 390 AMFSDRIFINDIVKTAKLMAKSMKSPTYALKFEYRSGNSWFEHETESGRNFGAAHADDV 448


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.313    0.134    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,307
Number of Sequences: 317
Number of extensions: 1692
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 157
length of database: 114,650
effective HSP length: 52
effective length of query: 105
effective length of database: 98,166
effective search space: 10307430
effective search space used: 10307430
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (20.9 bits)
S2: 40 (20.2 bits)