Silkworm BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000337-TA|BGIBMGA000337-PA|IPR000618|Insect cuticle
protein
         (157 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_7592| Best HMM Match : PI-PLC-Y (HMM E-Value=1.1e-33)               31   0.44 
SB_29039| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.8  
SB_7981| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   2.3  
SB_54212| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.5  
SB_35539| Best HMM Match : RVT_1 (HMM E-Value=1.7e-07)                 27   9.5  
SB_9668| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   9.5  
SB_9667| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   9.5  
SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)                      27   9.5  

>SB_7592| Best HMM Match : PI-PLC-Y (HMM E-Value=1.1e-33)
          Length = 997

 Score = 31.1 bits (67), Expect = 0.44
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 52  ETGNEINAEETGYVKNFGKGEG--EEVQVAEGKFSYKAPDGSLIALSYIADEN 102
           +T  E + E+ G++   G GE   +E+   E  F  K PDG  +A  Y+   N
Sbjct: 21  QTNQEDDDEDEGFLDGVGVGESSKDELHYGEKWFHGKLPDGRRVAEQYLNQFN 73


>SB_29039| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 446

 Score = 29.1 bits (62), Expect = 1.8
 Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 9/76 (11%)

Query: 37  ESDGPNPDGSYK-----WLYETGNEINAEETGYVKNFGKGEGEEVQVAEGKFSYKAPDGS 91
           E+DG N  G YK     W+ +   E  AEET       +   + V   E KFS+KA  G+
Sbjct: 148 ETDGFNFWGKYKRSVHAWMVDLKAE--AEETFETIFSEERHNQLVARGERKFSHKALQGA 205

Query: 92  LIALSYIADENGF-QP 106
           L+ +S+  DE  F QP
Sbjct: 206 LM-ISFYRDEPRFNQP 220


>SB_7981| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 113

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 52 ETGNEINAEETGYVKNFGKGEGEEVQVAEGK 82
          E G E+N EE G  +   K EGEEV   EG+
Sbjct: 4  EEGEEVNEEE-GEEEEVNKEEGEEVNQEEGE 33



 Score = 26.6 bits (56), Expect = 9.5
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 52 ETGNEINAEETGYVKNFGKGEGEEVQVAEGK 82
          E G E+N EE G  +   + EGEEV   EG+
Sbjct: 39 EEGKEMNEEEEG--EEVNQEEGEEVNQEEGE 67


>SB_54212| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 622

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 30  PIPIIRYESDGPNPDGSYKWLYETGNEINAEETGYVKNFGKGEGEEVQ 77
           P+   +   DG N + S  WL E   E      G+ K F    G  ++
Sbjct: 271 PVKAPKVRLDGTNEESS-SWLQEESGETEPSGNGHTKEFHTKGGSSIK 317


>SB_35539| Best HMM Match : RVT_1 (HMM E-Value=1.7e-07)
          Length = 1105

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)

Query: 127  YLKTLPPSAQDSSNSQGQYQQPAPFKPR 154
            +L+++PP A  +SN+     QPAP +P+
Sbjct: 1049 HLRSVPP-ATPNSNADANQSQPAPQEPK 1075


>SB_9668| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 372

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 29  DPIPIIRYESDGPNPDGSYKWLYE-TGNEINAEETGYVK 66
           D I IIRY+    +P G  K LY+  G EI+ E   +VK
Sbjct: 269 DRIMIIRYKEIADDPVGIAKRLYKFAGFEISDEVLDWVK 307


>SB_9667| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 275

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 29  DPIPIIRYESDGPNPDGSYKWLYE-TGNEINAEETGYVK 66
           D I IIRY+    +P G  K LY+  G EI+ E   +VK
Sbjct: 172 DRIMIIRYKEIADDPVGIAKRLYKFAGFEISDEVLDWVK 210


>SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)
          Length = 2352

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 41  PNPDGSYKWLYE-TGNEINAEETGYVKNFGKGEGEEVQVAEGKFSYKAPDGS 91
           P  DG  K   + +G+ +N  E G  K    G G  V   E + +  + DGS
Sbjct: 188 PREDGMNKTSSDGSGSCVNPREDGMNKTSSDGSGSCVNTREDRMNKTSSDGS 239


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.313    0.134    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,650,019
Number of Sequences: 59808
Number of extensions: 236925
Number of successful extensions: 304
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 303
Number of HSP's gapped (non-prelim): 9
length of query: 157
length of database: 16,821,457
effective HSP length: 76
effective length of query: 81
effective length of database: 12,276,049
effective search space: 994359969
effective search space used: 994359969
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 56 (26.6 bits)