Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000337-TA|BGIBMGA000337-PA|IPR000618|Insect cuticle
protein
(157 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0225 + 1761282-1762232,1762601-1762726,1762818-1763135 32 0.18
03_01_0520 - 3900387-3900613,3900812-3900853,3902092-3902210,390... 31 0.56
05_04_0092 + 17851085-17851346,17852778-17852860,17853891-178539... 29 1.7
08_02_0299 + 15487202-15487227,15487369-15487491,15488277-154883... 29 2.3
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 28 3.0
08_01_0684 + 6009474-6009582,6009715-6009904,6011412-6011483,601... 28 3.0
04_01_0541 - 6998030-6998521,7000666-7000732,7001057-7001202 28 3.0
03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049 28 3.0
02_02_0509 - 11064209-11064470,11065945-11066132,11066249-110664... 28 3.0
03_01_0567 + 4186620-4186694,4186766-4186852,4187293-4187932,418... 27 5.3
08_02_0969 - 23126389-23126670,23126764-23126947,23127017-231278... 27 7.0
01_06_0024 + 25690428-25690637,25694488-25694549,25694667-256947... 27 7.0
10_08_0031 + 14281681-14282023,14282105-14282484,14282581-142826... 27 9.2
09_06_0220 + 21644642-21647293 27 9.2
09_06_0096 - 20840855-20841994 27 9.2
07_03_0457 - 18404577-18405193,18405317-18405563,18405734-184059... 27 9.2
>11_01_0225 + 1761282-1762232,1762601-1762726,1762818-1763135
Length = 464
Score = 32.3 bits (70), Expect = 0.18
Identities = 23/86 (26%), Positives = 36/86 (41%)
Query: 61 ETGYVKNFGKGEGEEVQVAEGKFSYKAPDGSLIALSYIADENGFQPQGDHLXXXXXXXXA 120
E G + +G G+ A + DGSL A S IA +G D A
Sbjct: 68 EGGAAREVERGGGDVGLTATAISGRRRGDGSLAAGSSIAGGHGGGTADDEPHSEGTVAGA 127
Query: 121 IQKALDYLKTLPPSAQDSSNSQGQYQ 146
+Q L + +LP ++S +G+Y+
Sbjct: 128 VQGHLAGVGSLPTPTDEASRFEGRYE 153
>03_01_0520 -
3900387-3900613,3900812-3900853,3902092-3902210,
3903633-3903712,3903829-3903856,3904151-3904272,
3904714-3904857,3904897-3906327
Length = 730
Score = 30.7 bits (66), Expect = 0.56
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 2 IEEQEISILLCTLAVFYAVHAQQHSINDPI-PIIRYESDGPNPDGSYKWLYETGNE---- 56
I++ IS++ C L+ F + Q+ D + IR+ + +PDG K+L+ N
Sbjct: 375 IDQDHISLMNCLLSWFERMDGQRPPFFDELFQRIRFPASAEDPDGRDKYLFVLRNHPAFA 434
Query: 57 INAEETGYVKNFGK 70
A+ G++++F K
Sbjct: 435 RPAKRRGFLEDFYK 448
>05_04_0092 +
17851085-17851346,17852778-17852860,17853891-17853942,
17854054-17854179,17854291-17854373,17855127-17855309,
17855731-17855947,17856156-17856299,17856375-17856446,
17857166-17857230,17857517-17857584,17857968-17858007,
17858843-17859013
Length = 521
Score = 29.1 bits (62), Expect = 1.7
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 30 PIPIIRYESDGPNPDGSYKWLYETGNEINAEE-TGYVKNFGKGEGEEVQVAEGK-----F 83
P+P ++Y P P G+ ++Y E ++ G + FG+ +V V + F
Sbjct: 324 PVPSMQYPGSYPGPPGANLFIYHIPQEFGDQDLAGAFQGFGRVLSAKVFVDKATGLSKCF 383
Query: 84 SYKAPDGSLIALSYIADENGFQ 105
+ + D A + I+ NG+Q
Sbjct: 384 GFISYDSPASAQTAISMMNGYQ 405
>08_02_0299 +
15487202-15487227,15487369-15487491,15488277-15488397,
15488572-15488700,15489954-15490063,15490139-15490322,
15491155-15491346,15492190-15492411,15492501-15492687,
15494009-15494103
Length = 462
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/23 (60%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 130 TLPPSAQDSS-NSQGQYQQPAPF 151
T PSA DSS N QGQY P P+
Sbjct: 268 TADPSAADSSRNPQGQYGTPMPY 290
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 28.3 bits (60), Expect = 3.0
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 39 DGPNPDGSY-KWLYETGNEINAEETGYVKNFGKGEGEEVQVAEGKFSYKAPDGSLIALSY 97
DGP DG + K GN N G K GKG+G +GK K S +
Sbjct: 775 DGPLKDGKFQKNRRPDGNGKNRRPDGNGKGRGKGKGNANGFGKGKGKMKGKGTSCVNWEA 834
Query: 98 IA 99
+A
Sbjct: 835 VA 836
>08_01_0684 +
6009474-6009582,6009715-6009904,6011412-6011483,
6011644-6011715,6011806-6011877,6012163-6012234,
6012283-6012354,6012479-6012550,6012634-6012705,
6013112-6013183,6013275-6013349,6013453-6013524,
6013619-6013684,6013752-6013777,6014179-6014558,
6014642-6014840,6014910-6015068,6015569-6015613,
6015742-6015973,6016053-6016203,6016306-6016665
Length = 879
Score = 28.3 bits (60), Expect = 3.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 7 ISILLCTLAVFYAVHAQQHSINDPIPIIRYES 38
+ +++C+ + AVHAQQ + DPI + E+
Sbjct: 11 VLLVMCSSWLIAAVHAQQAATTDPIEVAALEA 42
>04_01_0541 - 6998030-6998521,7000666-7000732,7001057-7001202
Length = 234
Score = 28.3 bits (60), Expect = 3.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 129 KTLPPSAQDSSNSQGQYQQPAPFKPRGR 156
KTLPP SS+S + +P KP GR
Sbjct: 93 KTLPPPLPPSSSSASPPPERSPAKPHGR 120
>03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049
Length = 319
Score = 28.3 bits (60), Expect = 3.0
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Query: 122 QKALDYLKTL--PPSAQDSSNSQGQYQQPAP 150
+++ +Y+K+L PPSA + N+Q Q QQ +P
Sbjct: 260 RESWEYVKSLQRPPSAAHAGNAQQQQQQQSP 290
>02_02_0509 -
11064209-11064470,11065945-11066132,11066249-11066493,
11066816-11066987,11067090-11067496,11068443-11068587
Length = 472
Score = 28.3 bits (60), Expect = 3.0
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 31 IPIIRYESDGPNPDGSY-KWLYETGNEINAEETGYVKNF 68
+P +++ +P Y KW+Y GN+I + + Y +NF
Sbjct: 416 MPHMQFVDFNYSPISEYDKWVYTWGNDIYSSQKVYARNF 454
>03_01_0567 +
4186620-4186694,4186766-4186852,4187293-4187932,
4188009-4188094,4189620-4190010,4190102-4190172,
4190738-4190856,4191517-4191793
Length = 581
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 1 MIEEQEISILLCTLAVFYAVHAQQHSINDPIPIIR 35
+++EQ I LC L V A+HA + +N+ I R
Sbjct: 499 LVQEQNTPIDLCGLHVSEAIHALNYELNNRRKIAR 533
>08_02_0969 -
23126389-23126670,23126764-23126947,23127017-23127834,
23127953-23128642
Length = 657
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/28 (46%), Positives = 14/28 (50%)
Query: 128 LKTLPPSAQDSSNSQGQYQQPAPFKPRG 155
L TL P A +N Q Q PAP P G
Sbjct: 548 LGTLDPMADADANDGSQMQTPAPPSPAG 575
>01_06_0024 +
25690428-25690637,25694488-25694549,25694667-25694715,
25697066-25697182,25697305-25697358,25697813-25697898,
25698058-25698163,25698354-25698488
Length = 272
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 133 PSAQDSSNSQGQYQQPAPFKPR 154
PS SS+S PAPF+PR
Sbjct: 33 PSPSSSSSSSNSSNLPAPFRPR 54
>10_08_0031 +
14281681-14282023,14282105-14282484,14282581-14282646,
14284078-14284191,14284302-14284418,14284526-14284652,
14284779-14285065,14285200-14285390,14285504-14285589,
14285718-14285794,14285902-14286090
Length = 658
Score = 26.6 bits (56), Expect = 9.2
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 18 YAVHAQQHSINDPIPIIRYESDGPNPDGSYKWLYETGNEINAEETGYVKN-FGKGEG 73
Y +H +H I P+I Y G NP + L + + + A TG + G EG
Sbjct: 290 YLIHGDRHGI----PVIGYLKKGINPPSARDLLLSSPHTMVALRTGIITGIIGLAEG 342
>09_06_0220 + 21644642-21647293
Length = 883
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 52 ETGNEINAEETGYVKNFGKGEGEEVQVAEGKF 83
+TG +A Y+ + GKG G VQ +G +
Sbjct: 525 DTGGAADASAACYISDLGKGLGPIVQTRDGGY 556
>09_06_0096 - 20840855-20841994
Length = 379
Score = 26.6 bits (56), Expect = 9.2
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 29 DPIPIIRYESDGPNPDGS 46
DP+P++R P+PDG+
Sbjct: 303 DPVPVVRRRRPTPHPDGA 320
>07_03_0457 -
18404577-18405193,18405317-18405563,18405734-18405953,
18406239-18406333
Length = 392
Score = 26.6 bits (56), Expect = 9.2
Identities = 15/57 (26%), Positives = 24/57 (42%)
Query: 46 SYKWLYETGNEINAEETGYVKNFGKGEGEEVQVAEGKFSYKAPDGSLIALSYIADEN 102
++ WL + ++ +E G K F G E + F A DGS + DE+
Sbjct: 177 AWVWLNQQTGAVSIQEKGDAKKFRHGNPEYLDFLIEMFQGVAVDGSTAYIPGFEDED 233
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.134 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,121,733
Number of Sequences: 37544
Number of extensions: 221806
Number of successful extensions: 329
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 319
Number of HSP's gapped (non-prelim): 16
length of query: 157
length of database: 14,793,348
effective HSP length: 76
effective length of query: 81
effective length of database: 11,940,004
effective search space: 967140324
effective search space used: 967140324
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 56 (26.6 bits)
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