GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000337-TA|BGIBMGA000337-PA|IPR000618|Insect cuticle
protein
         (157 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.         25   1.5  
AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.         25   1.5  
AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.         25   1.5  
AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.         25   1.5  
AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.         25   1.5  

>AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 18 YAVHAQQHSINDPIPIIRYESDGPNPDGSYKWLYET 53
          +A HA+ +   D      Y  D   PDG  +W ++T
Sbjct: 46 FAFHARLNKPFDQFEEGDYTEDVTAPDGDGRWTFDT 81


>AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 18 YAVHAQQHSINDPIPIIRYESDGPNPDGSYKWLYET 53
          +A HA+ +   D      Y  D   PDG  +W ++T
Sbjct: 46 FAFHARLNKPFDQFEEGDYTEDVTAPDGDGRWTFDT 81


>AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 18 YAVHAQQHSINDPIPIIRYESDGPNPDGSYKWLYET 53
          +A HA+ +   D      Y  D   PDG  +W ++T
Sbjct: 46 FAFHARLNKPFDQFEEGDYTEDVTAPDGDGRWTFDT 81


>AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.
          Length = 187

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 18 YAVHAQQHSINDPIPIIRYESDGPNPDGSYKWLYET 53
          +A HA+ +   D      Y  D   PDG  +W ++T
Sbjct: 46 FAFHARLNKPFDQFEEGDYTEDVTAPDGDGRWTFDT 81


>AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 18 YAVHAQQHSINDPIPIIRYESDGPNPDGSYKWLYET 53
          +A HA+ +   D      Y  D   PDG  +W ++T
Sbjct: 46 FAFHARLNKPFDQFEEGDYTEDVTAPDGDGRWTFDT 81


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.134    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,917
Number of Sequences: 2123
Number of extensions: 7183
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 5
length of query: 157
length of database: 516,269
effective HSP length: 59
effective length of query: 98
effective length of database: 391,012
effective search space: 38319176
effective search space used: 38319176
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 45 (22.2 bits)