Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000337-TA|BGIBMGA000337-PA|IPR000618|Insect cuticle
protein
(157 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g37780.1 68415.m04639 DC1 domain-containing protein contains ... 29 1.1
At1g15280.2 68414.m01829 glycine-rich protein 29 1.9
At1g15280.1 68414.m01828 glycine-rich protein 29 1.9
At1g67510.1 68414.m07690 leucine-rich repeat family protein cont... 28 3.3
At3g13060.2 68416.m01628 expressed protein contains Pfam profile... 27 4.4
At3g13060.1 68416.m01627 expressed protein contains Pfam profile... 27 4.4
At1g09530.2 68414.m01069 phytochrome interacting factor 3 (PIF3)... 27 4.4
At1g09530.1 68414.m01068 phytochrome interacting factor 3 (PIF3)... 27 4.4
At5g16270.1 68418.m01900 Rad21/Rec8-like family protein weak sim... 27 5.8
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 27 5.8
At1g09170.1 68414.m01024 kinesin motor protein-related similar t... 27 7.7
>At2g37780.1 68415.m04639 DC1 domain-containing protein contains
Pfam PF03107: DC1 domain
Length = 286
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 97 YIADENGFQPQGDHLXXXXXXXXAIQKALDYLKTLPPSAQDSSNS-QGQYQQPAPFKPRG 155
Y G+QPQ + +++ + +T PP + Q Q QP P+ P+G
Sbjct: 157 YPPQGGGYQPQNQNYYPYMNSGSPKTESIGHPETYPPQGGGHQHQHQHQNHQPGPYTPQG 216
>At1g15280.2 68414.m01829 glycine-rich protein
Length = 585
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 28 NDPIPIIRYESDGPNPDGSYKWLYETGNEINAEETGYVKNFGKGEGEEVQVAEGKFSYKA 87
++ + ++Y++D D E+G I+ +++G VK G GEE E K
Sbjct: 53 DEEVGTVKYDNDEDGEDSYEDDEEESGGGIDNDKSGVVKEAGDMNGEEENEKE-KLQAAV 111
Query: 88 PDG 90
P G
Sbjct: 112 PTG 114
>At1g15280.1 68414.m01828 glycine-rich protein
Length = 584
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 28 NDPIPIIRYESDGPNPDGSYKWLYETGNEINAEETGYVKNFGKGEGEEVQVAEGKFSYKA 87
++ + ++Y++D D E+G I+ +++G VK G GEE E K
Sbjct: 53 DEEVGTVKYDNDEDGEDSYEDDEEESGGGIDNDKSGVVKEAGDMNGEEENEKE-KLQAAV 111
Query: 88 PDG 90
P G
Sbjct: 112 PTG 114
>At1g67510.1 68414.m07690 leucine-rich repeat family protein
contains protein kinase domain, Pfam:PF00069; contains
leucine-rich repeats, Pfam:PF00560
Length = 719
Score = 27.9 bits (59), Expect = 3.3
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 56 EINAEETGYVKNFGKGEGEEVQVAEGKFSYKAPDGSLIALSYIADENG 103
E ++E G + GKG+GE V + +G FS++ D L A +Y+ ++G
Sbjct: 375 EDDSEAEGNERGEGKGDGELVAIDKG-FSFEL-DELLRASAYVLGKSG 420
>At3g13060.2 68416.m01628 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 634
Score = 27.5 bits (58), Expect = 4.4
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 20 VHAQQHSIN---DPIPIIRYESDGPN-PDGSYKW--LYETGNEINAEETGYVKNFGKGEG 73
+H SI+ P P+ Y S G N P GS + Y G+ N+ GY+ + G+G+G
Sbjct: 241 MHRHSSSISPALSPQPLGSYGSYGQNIPMGSQRQRSFYGFGSGSNSYNRGYMHSGGRGQG 300
>At3g13060.1 68416.m01627 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 551
Score = 27.5 bits (58), Expect = 4.4
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 20 VHAQQHSIN---DPIPIIRYESDGPN-PDGSYKW--LYETGNEINAEETGYVKNFGKGEG 73
+H SI+ P P+ Y S G N P GS + Y G+ N+ GY+ + G+G+G
Sbjct: 241 MHRHSSSISPALSPQPLGSYGSYGQNIPMGSQRQRSFYGFGSGSNSYNRGYMHSGGRGQG 300
>At1g09530.2 68414.m01069 phytochrome interacting factor 3 (PIF3)
identical to phytochrome interacting factor 3 (PIF3)
GI:3929585 from [Arabidopsis thaliana]
Length = 524
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 121 IQKALDYLKTLPPSAQDSSNSQGQYQQPAPFKPRG 155
+ +A++YLK+L Q S + G Y PA P G
Sbjct: 382 LDEAIEYLKSLQLQVQIMSMASGYYLPPAVMFPPG 416
>At1g09530.1 68414.m01068 phytochrome interacting factor 3 (PIF3)
identical to phytochrome interacting factor 3 (PIF3)
GI:3929585 from [Arabidopsis thaliana]
Length = 524
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 121 IQKALDYLKTLPPSAQDSSNSQGQYQQPAPFKPRG 155
+ +A++YLK+L Q S + G Y PA P G
Sbjct: 382 LDEAIEYLKSLQLQVQIMSMASGYYLPPAVMFPPG 416
>At5g16270.1 68418.m01900 Rad21/Rec8-like family protein weak
similarity to cohesion family protein SYN2 [Arabidopsis
thaliana] GI:12006360; contains Pfam profiles PF04824:
Conserved region of Rad21 / Rec8 like protein, PF04825:
N terminus of Rad21 / Rec8 like protein; supporting cDNA
gi|18157648|gb|AF400129.1|AF400129
Length = 1031
Score = 27.1 bits (57), Expect = 5.8
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 32 PIIRYESDGPNPDGSYKWLYETGNEINAEETGYVKNFGKGE 72
P++ SDG NP+ YE NE++ EE ++N GE
Sbjct: 856 PLVEANSDGLNPETESYNKYEPHNEMSNEEAS-MQNALDGE 895
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 27.1 bits (57), Expect = 5.8
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 61 ETGYVKNFGKGEGEEVQVAEGKFSYKAPDGSLIALSYIADENGFQPQGDHLXXXXXXXXA 120
E GY K G+ EGE+ V+ + ++ S+I++ ++ DH A
Sbjct: 790 EAGYDKQLGRAEGEKNSVSYNENAFLITCKSMISMLRKPPKHFEMLVKDHFTHRAQHVLA 849
Query: 121 IQKALDYLKTLPPSAQDSSNSQG 143
KA Y++ +P + S+N QG
Sbjct: 850 ACKA--YMEGVPVGS--SANLQG 868
>At1g09170.1 68414.m01024 kinesin motor protein-related similar to
GB:AAB61066
Length = 1010
Score = 26.6 bits (56), Expect = 7.7
Identities = 21/82 (25%), Positives = 30/82 (36%), Gaps = 1/82 (1%)
Query: 72 EGEEVQVAEGKFSYKAPDGSLIALSYIADENGFQPQGDHLXXXXXXXXAIQKALDYLKTL 131
E ++ E K KA L +L + + F G HL Q+ L+ + L
Sbjct: 366 ERQQTHTEELKHDLKAVKAGL-SLLQMKYQQEFTSLGKHLHGLTYAATGYQRVLEENRKL 424
Query: 132 PPSAQDSSNSQGQYQQPAPFKP 153
QD S Y + PF P
Sbjct: 425 YNQVQDLKGSIRVYCRVRPFLP 446
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.134 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,073,545
Number of Sequences: 28952
Number of extensions: 178475
Number of successful extensions: 276
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 270
Number of HSP's gapped (non-prelim): 12
length of query: 157
length of database: 12,070,560
effective HSP length: 75
effective length of query: 82
effective length of database: 9,899,160
effective search space: 811731120
effective search space used: 811731120
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 56 (26.6 bits)
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