Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000336-TA|BGIBMGA000336-PA|IPR000618|Insect cuticle
protein
(207 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 30 1.2
08_02_0222 + 14446967-14448310 30 1.5
06_03_1228 - 28563546-28563630,28563897-28564000,28564256-285647... 30 1.5
12_01_0357 + 2720860-2721066,2721169-2721384,2721481-2723608,272... 29 3.6
06_03_0854 + 25400855-25403741,25406174-25407708 29 3.6
03_04_0148 - 17708737-17709027,17709270-17709518,17709713-177098... 28 4.7
01_03_0212 + 13842142-13842634,13842727-13843319 28 4.7
01_03_0209 - 13820980-13821572,13821665-13822157 28 4.7
10_01_0036 + 427678-428029,431043-431968 28 6.2
03_06_0579 + 34870958-34874578 28 6.2
01_05_0687 + 24288648-24292746,24293737-24293844,24294333-242944... 27 8.2
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 30.3 bits (65), Expect = 1.2
Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 9/119 (7%)
Query: 21 KVSLKPEQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDFRPKVQLETSTYIPIIRFDKEQ 80
+V+ E + + +EQN Q Q+QE + K + P+ + + F+ ++
Sbjct: 1230 RVASVEEIETHNNATIEQNVGYQQLQEQESVEFKETEVLEPQGVIPSHNVSSSEEFNPQE 1289
Query: 81 GTDGSYKTSYETGNNIQAQEQGYLKTVGDNQDNTALVQQGSYTYTAPDGQVITVEYTAD 139
T E G++ QA+E + ++ +N+A + + AP+ V+ E T D
Sbjct: 1290 TV-----TKEEPGSDTQAEESPVVIEDTEDVNNSAALSE----KIAPEEHVLATETTVD 1339
>08_02_0222 + 14446967-14448310
Length = 447
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 24 LKPEQQVEDQLPLEQNFNNYQPQQQEYRQAK 54
+ PEQ +E P E NN Q QQQ Y Q++
Sbjct: 213 ISPEQSIEQHFPAEH--NNIQIQQQAYYQSQ 241
>06_03_1228 -
28563546-28563630,28563897-28564000,28564256-28564759,
28564854-28564932,28566053-28566130,28566227-28566268,
28566352-28566449,28566542-28566673,28566757-28566879
Length = 414
Score = 29.9 bits (64), Expect = 1.5
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 8/98 (8%)
Query: 61 PKVQLETSTYIPIIRFDKEQGTDGSYKTSYETGNNIQAQEQGYLK---TVGDNQDN-TAL 116
P VQ TSTY+P++ ++ + + +QA +L VG++Q + T
Sbjct: 224 PAVQTNTSTYVPLLGGVRDHQAHFAQVNQGQFSPAVQANTSTHLPFSGGVGEHQIHFTPK 283
Query: 117 VQQGSYTYTAPDGQVITVEYTADEFGFRVSGDHIPTPP 154
V QG + P Q T + GFR H TPP
Sbjct: 284 VNQGQF---PPSVQTNTSAHVPYSGGFREHQVHF-TPP 317
>12_01_0357 +
2720860-2721066,2721169-2721384,2721481-2723608,
2723699-2724124,2724242-2724546,2724660-2724823,
2724899-2724980
Length = 1175
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 18 PQRKVSLKPEQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDF-RPKVQL 65
PQ + + +QQ++ Q +Q++ Y P Q+Y+Q + +P+ Q+
Sbjct: 238 PQTPTAEQYQQQLQYQQYYQQHYPGYNPYMQQYQQYGQYQQYTQPQTQI 286
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 28.7 bits (61), Expect = 3.6
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Query: 118 QQGSYTYTAPDGQVITVEYTADEFGFRVSGDHIPTPPPVSAEIQKGLDLIYAGIKANQER 177
+QG++ Y A +V+ E A FG D TP P+SAE++ L + +A +ER
Sbjct: 156 EQGAWAYDAA-ARVLRGEAAATNFG-----DPAQTPSPLSAEMRSML-AFFDRARARRER 208
Query: 178 AAIEAKSNPEAARQQEEKA 196
E + A E A
Sbjct: 209 VVEERGAAAAEAEASEAPA 227
>03_04_0148 -
17708737-17709027,17709270-17709518,17709713-17709851,
17710050-17710268,17710360-17710735,17711741-17711909
Length = 480
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 27 EQQVEDQLPLEQNFNNYQ-PQQQEYRQAKPVDDFRPKVQLETSTYIPIIRFDKEQ 80
E QVE L++ + + P + R A FR +LE YIP+ DKE+
Sbjct: 99 EAQVETTNQLKRIVDCIEKPLSNKVRHALETPSFRRMKRLEARLYIPLYEEDKEE 153
>01_03_0212 + 13842142-13842634,13842727-13843319
Length = 361
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 129 GQVITVEYTADEFGFRVSGDHIPTPPPVS 157
G + + E+ GF SG H P P P+S
Sbjct: 110 GDLTSTEFVQQFTGFNASGFHSPPPTPIS 138
>01_03_0209 - 13820980-13821572,13821665-13822157
Length = 361
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 129 GQVITVEYTADEFGFRVSGDHIPTPPPVS 157
G + + E+ GF SG H P P P+S
Sbjct: 110 GDLTSTEFVQQFTGFNASGFHSPPPTPIS 138
>10_01_0036 + 427678-428029,431043-431968
Length = 425
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 135 EYTADEFGFRVSGDHIPTPPP 155
EYT F FRVSGD PPP
Sbjct: 38 EYTPVLFFFRVSGDDDQPPPP 58
>03_06_0579 + 34870958-34874578
Length = 1206
Score = 27.9 bits (59), Expect = 6.2
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Query: 74 IRFDKEQG-TDGSYKTSYETGNNIQAQEQGYLKTVGDNQDNTALVQQGSYTYTAPDGQVI 132
+ F+ G T G+ T E+ Q G + V D+ D T + G +A DG +
Sbjct: 158 VGFEDANGVTAGAKNTGVESSLEGSFQSSGSVVGVFDDTDVTTI---GDLV-SASDGSPL 213
Query: 133 TVEYTADEFGFRVSGDHIPTPPPVSAEIQKGLD 165
V D+ G + SG + PV AE+ G++
Sbjct: 214 NV----DKQGDQDSGAEVVNDEPVDAEVVNGIE 242
>01_05_0687 +
24288648-24292746,24293737-24293844,24294333-24294442,
24295208-24295282
Length = 1463
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 126 APDGQVITVEYTADEFGFRVSGDHIPTPPPVSAEIQKGLDLIYA--GIKANQERAAIEAK 183
+PD T D FG P PPP ++ G D A A++ R + ++
Sbjct: 169 SPDSSYTESSPTRDRFGDEEGSHAAPEPPPPPTPLEGGPDASSAEPAAMASRAREPMGSR 228
Query: 184 SNPE 187
+ PE
Sbjct: 229 TAPE 232
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.309 0.128 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,838,332
Number of Sequences: 37544
Number of extensions: 251306
Number of successful extensions: 602
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 596
Number of HSP's gapped (non-prelim): 14
length of query: 207
length of database: 14,793,348
effective HSP length: 79
effective length of query: 128
effective length of database: 11,827,372
effective search space: 1513903616
effective search space used: 1513903616
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 58 (27.5 bits)
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