Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000336-TA|BGIBMGA000336-PA|IPR000618|Insect cuticle
protein
(207 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 31 0.45
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 31 0.45
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 31 0.45
U41027-4|AAC48196.2| 455|Caenorhabditis elegans Hypothetical pr... 31 0.59
U41027-3|AAQ82846.1| 516|Caenorhabditis elegans Hypothetical pr... 31 0.59
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 29 1.8
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 29 1.8
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 29 2.4
AL132860-27|CAB60511.2| 700|Caenorhabditis elegans Hypothetical... 29 2.4
AL117204-3|CAB55147.2| 675|Caenorhabditis elegans Hypothetical ... 28 4.2
AF067613-5|AAN73864.1| 266|Caenorhabditis elegans Hypothetical ... 28 4.2
Z83240-2|CAB05814.2| 360|Caenorhabditis elegans Hypothetical pr... 27 7.3
U52003-1|AAG00054.1| 503|Caenorhabditis elegans Hypothetical pr... 27 7.3
U23510-5|AAY55872.1| 110|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z74030-3|CAA98437.2| 395|Caenorhabditis elegans Hypothetical pr... 27 9.7
AF026208-2|AAB71269.3| 774|Caenorhabditis elegans Prion-like-(q... 27 9.7
AC006708-18|AAF60424.2| 450|Caenorhabditis elegans Hypothetical... 27 9.7
AC006708-17|AAK68884.2| 435|Caenorhabditis elegans Hypothetical... 27 9.7
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 31.5 bits (68), Expect = 0.45
Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 5/96 (5%)
Query: 68 STYIPIIRFDKEQ-GTDGSYKTSYETGNNIQAQEQGYLKTVGDNQDNTALVQQGSYTY-- 124
S PI + D GTD S + G I ++G K +G + + G+Y Y
Sbjct: 7852 SVVYPITKPDGTPLGTDASGSFVTDDGQAIGKDDEG--KPIGPDGQTLPIDDSGNYIYPV 7909
Query: 125 TAPDGQVITVEYTADEFGFRVSGDHIPTPPPVSAEI 160
PDGQ + + + + D IP P S +
Sbjct: 7910 VGPDGQALPTDESGKTVYPVLGPDGIPLPTDASGAV 7945
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 31.5 bits (68), Expect = 0.45
Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 5/96 (5%)
Query: 68 STYIPIIRFDKEQ-GTDGSYKTSYETGNNIQAQEQGYLKTVGDNQDNTALVQQGSYTY-- 124
S PI + D GTD S + G I ++G K +G + + G+Y Y
Sbjct: 7897 SVVYPITKPDGTPLGTDASGSFVTDDGQAIGKDDEG--KPIGPDGQTLPIDDSGNYIYPV 7954
Query: 125 TAPDGQVITVEYTADEFGFRVSGDHIPTPPPVSAEI 160
PDGQ + + + + D IP P S +
Sbjct: 7955 VGPDGQALPTDESGKTVYPVLGPDGIPLPTDASGAV 7990
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 31.5 bits (68), Expect = 0.45
Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 5/96 (5%)
Query: 68 STYIPIIRFDKEQ-GTDGSYKTSYETGNNIQAQEQGYLKTVGDNQDNTALVQQGSYTY-- 124
S PI + D GTD S + G I ++G K +G + + G+Y Y
Sbjct: 7897 SVVYPITKPDGTPLGTDASGSFVTDDGQAIGKDDEG--KPIGPDGQTLPIDDSGNYIYPV 7954
Query: 125 TAPDGQVITVEYTADEFGFRVSGDHIPTPPPVSAEI 160
PDGQ + + + + D IP P S +
Sbjct: 7955 VGPDGQALPTDESGKTVYPVLGPDGIPLPTDASGAV 7990
>U41027-4|AAC48196.2| 455|Caenorhabditis elegans Hypothetical
protein R08E3.3a protein.
Length = 455
Score = 31.1 bits (67), Expect = 0.59
Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 130 QVITVEYTADEFGFRVSGDHIPTPPPVSAEIQKGLDLIYAGIKANQERAAIEAKSNPEAA 189
Q I +T +F F+++ +P P + ++ K + + + N E ++A+ + A
Sbjct: 181 QYINSSHTEKDFNFKLTKPALPPKPIFAKKVDKEEETVEEATEENNENLVLQAEYEQKLA 240
Query: 190 RQQEEKAALDYKGQYYQQ 207
E KA + + Q+ +Q
Sbjct: 241 ---EYKALQEKRSQFEEQ 255
>U41027-3|AAQ82846.1| 516|Caenorhabditis elegans Hypothetical
protein R08E3.3b protein.
Length = 516
Score = 31.1 bits (67), Expect = 0.59
Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 130 QVITVEYTADEFGFRVSGDHIPTPPPVSAEIQKGLDLIYAGIKANQERAAIEAKSNPEAA 189
Q I +T +F F+++ +P P + ++ K + + + N E ++A+ + A
Sbjct: 181 QYINSSHTEKDFNFKLTKPALPPKPIFAKKVDKEEETVEEATEENNENLVLQAEYEQKLA 240
Query: 190 RQQEEKAALDYKGQYYQQ 207
E KA + + Q+ +Q
Sbjct: 241 ---EYKALQEKRSQFEEQ 255
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 19 QRKVSLKPEQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDFRPKVQLETST 69
Q + ++P+QQ P+ N N QQ YR + RP VQ++ T
Sbjct: 23 QMRPVMQPQQQRTMYYPVRTNCQNRCNQQTRYRWNVRPTNIRPNVQVQIRT 73
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 29.5 bits (63), Expect = 1.8
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Query: 26 PEQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDFRPK-VQLETSTYI---PIIRFDKEQG 81
P+QQ + Q + Y+PQQQ+Y Q P D RP+ V+ YI P R +
Sbjct: 73 PQQQFQRQGQSQYIQQQYRPQQQQYSQ-YPRFDLRPQPVRPVRPVYIASTPASRLSYTER 131
Query: 82 TDGSYKTSYETGNNIQAQ 99
SY E N + +
Sbjct: 132 PQTSYGDEIEDTNYLSGR 149
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 19 QRKVSLKPEQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDFRPKVQ 64
QR+ + +Q E Q L+Q+ Q QQQ+ +Q P +P+ Q
Sbjct: 226 QREQQQREQQHREHQARLQQHQQQQQQQQQQQQQRPPQPQPQPQPQ 271
>AL132860-27|CAB60511.2| 700|Caenorhabditis elegans Hypothetical
protein Y56A3A.32 protein.
Length = 700
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 18 PQRKVSLKPEQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDFRPKVQLE 66
P++K KPE+ E + P QP+Q E +Q D PK Q++
Sbjct: 133 PEKKEEAKPEKPAEPKEPEPAQKQAEQPEQAEEKQ--ETKDAEPKEQVD 179
>AL117204-3|CAB55147.2| 675|Caenorhabditis elegans Hypothetical
protein Y116A8C.5 protein.
Length = 675
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 128 DGQVITVE-YTADEFGFRVSGDHIPTPPPVSAEIQK 162
D ++I E Y D+ FR+S TP P+S E+ K
Sbjct: 598 DQKIIGFEDYNLDQLFFRISAMSFCTPAPLSLEVSK 633
>AF067613-5|AAN73864.1| 266|Caenorhabditis elegans Hypothetical
protein F56D6.6 protein.
Length = 266
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 155 PVSAEIQKGLDLIYAGIKANQERAAIEAKSNPEAARQQEEK 195
P +A +QK + A +KAN ++ A E+K N E + + EK
Sbjct: 119 PDAAALQKTFNNSSAQMKANFDKNAAESKENFEKKKDEMEK 159
>Z83240-2|CAB05814.2| 360|Caenorhabditis elegans Hypothetical
protein T23H4.3 protein.
Length = 360
Score = 27.5 bits (58), Expect = 7.3
Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 53 AKPVDDFRPKVQLETSTYIPIIRFDKEQGTDGSYKTSYETGNNIQAQEQGYLKTVGDNQD 112
+ P+ + RP + + P+ R+ K Q DG+Y Y N E+ +KT +
Sbjct: 49 SSPIRERRPIFRNALLSNSPL-RWSKMQDLDGNYLIPYVISGNYDTVERDTIKTAMEKIA 107
Query: 113 NTALVQ 118
N ++
Sbjct: 108 NNTCIR 113
>U52003-1|AAG00054.1| 503|Caenorhabditis elegans Hypothetical
protein ZK381.2 protein.
Length = 503
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 83 DGSYKTSYETGNNIQAQEQGYLKTVGDNQDNTALVQQGSYTYTAPDGQVITVEYTADEF 141
D YK ++ T ++ + + +D + Y Y+ PD Q +T +T D F
Sbjct: 437 DSFYKDTFVTKIGVRRCPNADICDLPQREDYKCIHSDAQY-YSGPDMQPVTYHFTTDSF 494
>U23510-5|AAY55872.1| 110|Caenorhabditis elegans Hypothetical
protein R12C12.10 protein.
Length = 110
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 77 DKEQGTDGSYKTSYETGNNIQAQEQGYLKTVGDNQDNTALVQQGSY 122
+ T Y Y GN + + G + VGD+ L+QQGSY
Sbjct: 53 ESSASTTLGYYEQYWQGNGWKTDDAGNVY-VGDDNAKLLLIQQGSY 97
>Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical
protein T28F3.5 protein.
Length = 1679
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 24 LKPEQQVEDQLPLEQNFN----NYQPQQQEY-RQAKPVDDFRPKVQLETSTYIPIIRFDK 78
L+ ++QV+DQLP + F+ ++ +++ Y +AK + + R + + I + + K
Sbjct: 718 LEIDKQVQDQLPTSEKFSGKMKGWKMEEKSYFERAKLILEGRGPLDYPVDSLISGLFYSK 777
Query: 79 EQGTDGS 85
E G D +
Sbjct: 778 ECGDDAT 784
>Z74030-3|CAA98437.2| 395|Caenorhabditis elegans Hypothetical
protein D1054.5 protein.
Length = 395
Score = 27.1 bits (57), Expect = 9.7
Identities = 25/93 (26%), Positives = 36/93 (38%), Gaps = 8/93 (8%)
Query: 71 IPIIRFDKEQGTDGSYK---TSYETGNNIQAQEQGYLKTVGDNQDNTALVQQGSYTYT-- 125
IP ++ Q SY +SY + + Q L G N+ +AL QGS+ Y
Sbjct: 140 IPRFQWQSSQNNMTSYGEQGSSYRSTSVEQLFSPPILSANGRNRSESALRPQGSHKYDTI 199
Query: 126 --APDGQVITVEYTAD-EFGFRVSGDHIPTPPP 155
+P +A R+ D P PPP
Sbjct: 200 SFSPSSNQFPGSSSAQCNVEIRLGDDRTPPPPP 232
>AF026208-2|AAB71269.3| 774|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 40
protein.
Length = 774
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 25 KPEQQVEDQLPLEQNFNNYQPQQ-QEYRQAKPVDDFRPKVQLETSTYIPIIRFDKEQ 80
+P+Q + Q +Q +N PQQ Q+ Q P + Q +IP + ++Q
Sbjct: 509 QPQQPQQQQFYNQQQYNAQTPQQVQQVHQQTPQQQVQQPHQPNQQPHIPSQQLPRQQ 565
>AC006708-18|AAF60424.2| 450|Caenorhabditis elegans Hypothetical
protein Y110A7A.6a protein.
Length = 450
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 35 PLEQNFNNYQPQQQEYRQAKPVDDFR 60
PL +N NY + +EY + + +DDFR
Sbjct: 270 PLSENGLNYAGKLREYFEKEDLDDFR 295
>AC006708-17|AAK68884.2| 435|Caenorhabditis elegans Hypothetical
protein Y110A7A.6b protein.
Length = 435
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 35 PLEQNFNNYQPQQQEYRQAKPVDDFR 60
PL +N NY + +EY + + +DDFR
Sbjct: 276 PLSENGLNYAGKLREYFEKEDLDDFR 301
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.309 0.128 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,142,016
Number of Sequences: 27539
Number of extensions: 232130
Number of successful extensions: 756
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 735
Number of HSP's gapped (non-prelim): 66
length of query: 207
length of database: 12,573,161
effective HSP length: 78
effective length of query: 129
effective length of database: 10,425,119
effective search space: 1344840351
effective search space used: 1344840351
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -