Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000336-TA|BGIBMGA000336-PA|IPR000618|Insect cuticle
protein
(207 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g65540.1 68418.m08247 expressed protein 33 0.10
At1g33880.1 68414.m04200 avirulence-responsive family protein / ... 29 1.7
At5g62090.2 68418.m07793 expressed protein 28 3.9
At5g62090.1 68418.m07792 expressed protein 28 3.9
At4g39680.1 68417.m05614 SAP domain-containing protein contains ... 28 3.9
At5g16270.1 68418.m01900 Rad21/Rec8-like family protein weak sim... 28 5.2
At5g15020.1 68418.m01761 paired amphipathic helix repeat-contain... 28 5.2
At5g37630.1 68418.m04532 chromosome condensation family protein ... 27 6.9
At4g31200.3 68417.m04431 SWAP (Suppressor-of-White-APricot)/surp... 27 6.9
At4g31200.2 68417.m04430 SWAP (Suppressor-of-White-APricot)/surp... 27 6.9
At4g31200.1 68417.m04429 SWAP (Suppressor-of-White-APricot)/surp... 27 6.9
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 27 9.1
At2g26470.1 68415.m03176 expressed protein contains PF02586: Unc... 27 9.1
At2g04970.1 68415.m00518 hypothetical protein similar to At2g152... 27 9.1
At1g76880.1 68414.m08946 trihelix DNA-binding protein, putative ... 27 9.1
>At5g65540.1 68418.m08247 expressed protein
Length = 605
Score = 33.5 bits (73), Expect = 0.10
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 19 QRKVSLKPEQQVEDQL--PLEQNFN--NYQPQQQ-EYRQAKPVDDFRPKVQLETSTYIPI 73
Q++ SL+ QQ++ Q+ ++Q N N+Q QQQ E + +PV RP + +E +
Sbjct: 441 QQQASLRLPQQIQRQMHPQMQQMVNPQNFQQQQQLERMRRRPVTSPRPNMDMEKDRPLVQ 500
Query: 74 IRFD--KEQGTDGSYKTSYETGNNIQAQEQ 101
++ + E DG+ + Q Q+Q
Sbjct: 501 VKLENPSEMAVDGNAFNPMNPRHQQQLQQQ 530
>At1g33880.1 68414.m04200 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 [Arabidopsis thaliana]; contains
Pfam PF04548: AIG1 family;
Length = 234
Score = 29.5 bits (63), Expect = 1.7
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 77 DKEQGTDGS--YKTSYETGNNIQAQEQGYLKTVGDNQDNT--ALVQQGSYTYTAPDGQVI 132
DK++GT S K G ++ +G N+ + A + Y+ T PDGQ+I
Sbjct: 12 DKKKGTSVSKPVKNIVLVGRSVNGICTTGNNILGQNKFGSEGAFMHCQMYSTTTPDGQMI 71
Query: 133 TVEYTADEFGFRVSGDHI 150
V T F VS D+I
Sbjct: 72 NVIKTPGMFDLSVSEDYI 89
>At5g62090.2 68418.m07793 expressed protein
Length = 816
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Query: 18 PQRKVSLKPEQQVEDQLPLEQNFNNYQPQQQEYRQ 52
P ++V L+ +QQV+ Q L+Q +Q QQQ+ +Q
Sbjct: 242 PLQRVQLQQQQQVQQQQQLQQ---QHQQQQQQLQQ 273
>At5g62090.1 68418.m07792 expressed protein
Length = 816
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Query: 18 PQRKVSLKPEQQVEDQLPLEQNFNNYQPQQQEYRQ 52
P ++V L+ +QQV+ Q L+Q +Q QQQ+ +Q
Sbjct: 242 PLQRVQLQQQQQVQQQQQLQQ---QHQQQQQQLQQ 273
>At4g39680.1 68417.m05614 SAP domain-containing protein contains
Pfam domain PF02037: SAP domain
Length = 633
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 21 KVSLKPEQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDFRPKVQ 64
K+ LK + ++ D + LEQN N +Q ++ P+D P Q
Sbjct: 240 KIELK-DNKIADNVKLEQNVNKFQEPSTVVGESHPMDVEEPLEQ 282
>At5g16270.1 68418.m01900 Rad21/Rec8-like family protein weak
similarity to cohesion family protein SYN2 [Arabidopsis
thaliana] GI:12006360; contains Pfam profiles PF04824:
Conserved region of Rad21 / Rec8 like protein, PF04825:
N terminus of Rad21 / Rec8 like protein; supporting cDNA
gi|18157648|gb|AF400129.1|AF400129
Length = 1031
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 110 NQDNTALVQQGSYTYTAPDGQVITVEYTADEFGFRVSGDHIPTPPP 155
NQ+ + +Q Y+ PDGQ+ T ++ G PPP
Sbjct: 395 NQETDSSLQGDEQAYSRPDGQLNNAHETDEQLGNLTGFTDSDFPPP 440
>At5g15020.1 68418.m01761 paired amphipathic helix repeat-containing
protein similar to transcription co-repressor Sin3
[Xenopus laevis] GI:4960210; contains Pfam profile
PF02671: Paired amphipathic helix repeat
Length = 1377
Score = 27.9 bits (59), Expect = 5.2
Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 3/109 (2%)
Query: 99 QEQGYLKTVGDNQDNTALVQQGSYTYTAPDGQVITVEYTADEFGFRVSGDHIPTPPPVSA 158
+E+G L VGD++DN + + TA + E DE GD ++
Sbjct: 967 KEEGELSPVGDSEDNFVVYEDRELKATAKTEHSVEAEGENDEDADDEDGDDASEAGEDAS 1026
Query: 159 EIQKGLDLIYA---GIKANQERAAIEAKSNPEAARQQEEKAALDYKGQY 204
+ D G++ E I+ K+ E + E ++ KG +
Sbjct: 1027 GTESIGDECSQDDNGVEEEGEHDEIDGKAESEGEAEGMESHLIEDKGLF 1075
>At5g37630.1 68418.m04532 chromosome condensation family protein
contains pfam profile: PF04154 chromosome condensation
protein 3, C-terminal region
Length = 1051
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 162 KGLDLIYAGIKANQERAAIEAKSN 185
K LDL+YAG++++ RA+ E+ N
Sbjct: 677 KMLDLLYAGLESDDWRASTESSEN 700
>At4g31200.3 68417.m04431 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein related to DAN26 [Homo
sapiens] gi|1770394|emb|CAA69591
Length = 650
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 151 PTPPPVSAEIQKGLD-LIYAGIKANQERAAI---EAKSNPEAA 189
P PPP E+QK +D L+ +K E A+ K NP+ A
Sbjct: 117 PPPPPADPELQKRIDKLVEYSVKNGPEFEAMMRDRQKDNPDYA 159
>At4g31200.2 68417.m04430 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein related to DAN26 [Homo
sapiens] gi|1770394|emb|CAA69591
Length = 650
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 151 PTPPPVSAEIQKGLD-LIYAGIKANQERAAI---EAKSNPEAA 189
P PPP E+QK +D L+ +K E A+ K NP+ A
Sbjct: 117 PPPPPADPELQKRIDKLVEYSVKNGPEFEAMMRDRQKDNPDYA 159
>At4g31200.1 68417.m04429 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein related to DAN26 [Homo
sapiens] gi|1770394|emb|CAA69591
Length = 650
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 151 PTPPPVSAEIQKGLD-LIYAGIKANQERAAI---EAKSNPEAA 189
P PPP E+QK +D L+ +K E A+ K NP+ A
Sbjct: 117 PPPPPADPELQKRIDKLVEYSVKNGPEFEAMMRDRQKDNPDYA 159
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 27 EQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDFRPKVQ 64
+QQ + Q +Q N P QQ+ +Q+ P +P Q
Sbjct: 143 QQQQQQQQQQQQQHQNQPPSQQQQQQSTPQHQQQPTPQ 180
>At2g26470.1 68415.m03176 expressed protein contains PF02586:
Uncharacterized ACR, COG2135; weak similarity to NF-M
protein (GI:205688) [Rattus norvegicus]
Length = 487
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 56 VDDFRPKVQLETSTYIPIIRFDKEQ 80
+D +RP + +YIP++R D E+
Sbjct: 30 LDRYRPSYNVAPGSYIPVLRRDNEE 54
>At2g04970.1 68415.m00518 hypothetical protein similar to At2g15200,
At1g32830, At2g14140, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 808
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 172 KANQERAAIEAKSNPEAARQQEEKAALDYKG 202
+ N+E E K E ++EEK ++Y+G
Sbjct: 463 QGNEEMEGEEEKQEEEGKEEEEEKICVEYRG 493
>At1g76880.1 68414.m08946 trihelix DNA-binding protein, putative
similar to DNA-binding protein DF1 [Pisum sativum]
GI:13646986
Length = 603
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 76 FDKEQGTDGSYKTSYETGNNIQAQEQGYLKTVGDNQDN 113
FD E+GTD Y E N + +E G + V N +N
Sbjct: 560 FDDEEGTDEEYDDEDEEEEN-EEEEGGEFELVPSNNNN 596
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.309 0.128 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,791,334
Number of Sequences: 28952
Number of extensions: 206353
Number of successful extensions: 477
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 465
Number of HSP's gapped (non-prelim): 18
length of query: 207
length of database: 12,070,560
effective HSP length: 78
effective length of query: 129
effective length of database: 9,812,304
effective search space: 1265787216
effective search space used: 1265787216
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 57 (27.1 bits)
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