Silkworm BLAST Result against spombe

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000335-TA|BGIBMGA000335-PA|IPR000618|Insect cuticle
protein
         (440 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce...    31   0.42 
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam...    29   0.98 
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||...    29   0.98 
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|...    29   1.3  
SPCC1682.03c |mug174||meiotically upregulated gene Mug174|Schizo...    29   1.3  
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch...    29   1.7  
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    29   1.7  
SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomy...    29   1.7  
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos...    28   2.3  
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb...    28   2.3  
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos...    27   3.9  
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe...    26   9.1  
SPBC19F8.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2||...    26   9.1  
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual    26   9.1  

>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1036

 Score = 30.7 bits (66), Expect = 0.42
 Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 369 NTPVTTDSGSSETPTAITEALTDLSSTTSEPISTEAVSTTVVQDIPSSTLA 419
           +TP+T+ + +S T  + T  LT  +STTS  +S+ A S      +P+S+++
Sbjct: 372 STPLTSVNSTSATSASSTP-LTSANSTTSTSVSSTAPSYNTSSVLPTSSVS 421



 Score = 30.7 bits (66), Expect = 0.42
 Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 369 NTPVTTDSGSSETPTAITEALTDLSSTTSEPISTEAVSTTVVQDIPSSTLA 419
           +TP+T+ + +S T  + T  LT  +STTS  +S+ A S      +P+S+++
Sbjct: 486 STPLTSVNSTSATSASSTP-LTSANSTTSTSVSSTAPSYNTSSVLPTSSVS 535


>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
           Mam3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1082

 Score = 29.5 bits (63), Expect = 0.98
 Identities = 17/50 (34%), Positives = 25/50 (50%)

Query: 370 TPVTTDSGSSETPTAITEALTDLSSTTSEPISTEAVSTTVVQDIPSSTLA 419
           T VT  S SS     +  ++T  S TT+ P S+ ++ T      PSS L+
Sbjct: 292 TTVTATSDSSVITYTLINSVTSSSETTNLPSSSSSLVTIGESSFPSSLLS 341


>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 534

 Score = 29.5 bits (63), Expect = 0.98
 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 3/46 (6%)

Query: 372 VTTDSGSSETPTAITEALTDLSSTTSEPISTEAVSTTVVQDIPSST 417
           +++ S SS +PT+ +  ++  SS++S P ST   S+T+     SS+
Sbjct: 273 ISSSSSSSSSPTSTSSTISSSSSSSSSPTST---SSTISSSSSSSS 315


>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 642

 Score = 29.1 bits (62), Expect = 1.3
 Identities = 17/48 (35%), Positives = 25/48 (52%)

Query: 370 TPVTTDSGSSETPTAITEALTDLSSTTSEPISTEAVSTTVVQDIPSST 417
           TP TT +  S   T  T A T+ ++TT+      A ST V  D+ S++
Sbjct: 550 TPSTTKAVESTPSTLPTSASTNAAATTTTKKPKAAKSTAVRDDVSSAS 597


>SPCC1682.03c |mug174||meiotically upregulated gene
           Mug174|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 626

 Score = 29.1 bits (62), Expect = 1.3
 Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 1/39 (2%)

Query: 369 NTPVTTDSGSSETPTAITEALTDLSSTTSEPISTEAVST 407
           +TP  +DS SSE+ ++++++ +DLSST+      E+  T
Sbjct: 260 STPSESDSSSSESSSSVSDS-SDLSSTSDSSSGDESSDT 297


>SPBC21D10.06c |map4||cell agglutination protein
           Map4|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 948

 Score = 28.7 bits (61), Expect = 1.7
 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 7/51 (13%)

Query: 373 TTDSGSSETPTAI-----TEALTDLSSTTSEPISTEA--VSTTVVQDIPSS 416
           T+ SGSS+  T I     T A + L  TTS PI+T A  +S+ +    PSS
Sbjct: 286 TSSSGSSQDSTTIDSTPSTIATSTLQPTTSSPITTSAPSLSSALPTTYPSS 336



 Score = 27.5 bits (58), Expect = 3.9
 Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)

Query: 373 TTDSGSSETPTAITEALTDLSSTTSEPISTEAV-STTVVQDIPSST 417
           TT++ SS   ++ + ALT +SS+     S+ A+ S+T+V  I SS+
Sbjct: 556 TTNAQSSSLSSSNSSALTHISSSIVSSGSSSALSSSTIVSSINSSS 601



 Score = 26.6 bits (56), Expect = 6.9
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 370 TPVTTDSGSSETPTAITEALTDLSSTTSEPISTEAVSTTV 409
           TP+T  +  S  PT I  +    SS +S   +T A S+++
Sbjct: 525 TPITISTSLSSFPTTIVSSSFQYSSLSSNVTTTNAQSSSL 564


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 28.7 bits (61), Expect = 1.7
 Identities = 14/46 (30%), Positives = 20/46 (43%)

Query: 370 TPVTTDSGSSETPTAITEALTDLSSTTSEPISTEAVSTTVVQDIPS 415
           TP    + +S T   I    T  + T S P+ T + S T    IP+
Sbjct: 192 TPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPT 237



 Score = 28.3 bits (60), Expect = 2.3
 Identities = 14/45 (31%), Positives = 19/45 (42%)

Query: 370 TPVTTDSGSSETPTAITEALTDLSSTTSEPISTEAVSTTVVQDIP 414
           TP    + +S T   I    T  + T S P+ T + S T    IP
Sbjct: 135 TPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPTTSTSCTTSTSIP 179



 Score = 28.3 bits (60), Expect = 2.3
 Identities = 14/45 (31%), Positives = 19/45 (42%)

Query: 370 TPVTTDSGSSETPTAITEALTDLSSTTSEPISTEAVSTTVVQDIP 414
           TP    + +S T   I    T  + T S P+ T + S T    IP
Sbjct: 248 TPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIP 292



 Score = 28.3 bits (60), Expect = 2.3
 Identities = 14/45 (31%), Positives = 21/45 (46%)

Query: 370 TPVTTDSGSSETPTAITEALTDLSSTTSEPISTEAVSTTVVQDIP 414
           TP    + +S T T    A T  + T+S P+ + + S T    IP
Sbjct: 302 TPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIP 346



 Score = 27.9 bits (59), Expect = 3.0
 Identities = 14/45 (31%), Positives = 21/45 (46%)

Query: 370 TPVTTDSGSSETPTAITEALTDLSSTTSEPISTEAVSTTVVQDIP 414
           TP    + +S T T    A T  + T+S P+ + + S T    IP
Sbjct: 356 TPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIP 400


>SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 385

 Score = 28.7 bits (61), Expect = 1.7
 Identities = 16/33 (48%), Positives = 18/33 (54%)

Query: 376 SGSSETPTAITEALTDLSSTTSEPISTEAVSTT 408
           SGSSE  + IT      SS+T  PIST   S T
Sbjct: 39  SGSSEFTSTITPETPSSSSSTFVPISTHTSSAT 71



 Score = 28.7 bits (61), Expect = 1.7
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 371 PVTTDSGSSETPTAITEALTDLSSTTSEPISTEAVSTTVVQDIPSSTL 418
           P+TT S S     + ++ ++  SSTT   I + ++S+T V   P ST+
Sbjct: 96  PITTVSSSDSFIPSSSQTISASSSTTDNVIVSSSISST-VSSTPVSTI 142


>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
           orphan|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1563

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)

Query: 370 TPVTTDSGSS----ETPTAITEALTDLSSTTSEPISTEAVSTTV 409
           TP  T +G++    +TPT +T   TD+ + T+    TE  + TV
Sbjct: 859 TPTGTSTGTTTVVIQTPTTVTATETDIVTVTTGYTGTETSTVTV 902



 Score = 28.3 bits (60), Expect = 2.3
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)

Query: 370 TPVTTDSGSS----ETPTAITEALTDLSSTTSEPISTEAVSTTV 409
           TP  T +G++    +TPT +T   TD+ + T+    TE  + TV
Sbjct: 903 TPTGTSTGTTTVVIQTPTTVTATETDIVTVTTGYTGTETSTVTV 946



 Score = 28.3 bits (60), Expect = 2.3
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)

Query: 370 TPVTTDSGSS----ETPTAITEALTDLSSTTSEPISTEAVSTTV 409
           TP  T +G++    +TPT +T   TD+ + T+    TE  + TV
Sbjct: 947 TPTGTSTGTTTVVIQTPTTVTATETDIVTVTTGYTGTETSTVTV 990



 Score = 28.3 bits (60), Expect = 2.3
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)

Query: 370  TPVTTDSGSS----ETPTAITEALTDLSSTTSEPISTEAVSTTV 409
            TP  T +G++    +TPT +T   TD+ + T+    TE  + TV
Sbjct: 991  TPTGTSTGTTTVVIQTPTTVTATETDIVTVTTGYTGTETSTVTV 1034



 Score = 28.3 bits (60), Expect = 2.3
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)

Query: 370  TPVTTDSGSS----ETPTAITEALTDLSSTTSEPISTEAVSTTV 409
            TP  T +G++    +TPT +T   TD+ + T+    TE  + TV
Sbjct: 1035 TPTGTSTGTTTVVIQTPTTVTATETDIVTVTTGYTGTETSTVTV 1078



 Score = 28.3 bits (60), Expect = 2.3
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)

Query: 370  TPVTTDSGSS----ETPTAITEALTDLSSTTSEPISTEAVSTTV 409
            TP  T +G++    +TPT +T   TD+ + T+    TE  + TV
Sbjct: 1079 TPTGTSTGTTTVVIQTPTTVTATETDIVTVTTGYTGTETSTVTV 1122


>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 262

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 3/52 (5%)

Query: 369 NTPVTTDSGSSETPTAITEALTDLSSTTSEPIS---TEAVSTTVVQDIPSST 417
           +T  ++ S S+ TP++ +   +  SS++S PIS   T ++S++    + SS+
Sbjct: 136 STSASSTSSSTATPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVSSSS 187


>SPAC2E1P3.05c |||fungal cellulose binding domain
           protein|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 197

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 16/49 (32%), Positives = 28/49 (57%)

Query: 371 PVTTDSGSSETPTAITEALTDLSSTTSEPISTEAVSTTVVQDIPSSTLA 419
           P ++ S ++ + T+ T + + +SSTT    S  AVS+T      SST++
Sbjct: 110 PSSSSSSAASSTTSTTSSSSLVSSTTLTSSSPSAVSSTTSIPSISSTIS 158


>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 871

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 11/32 (34%), Positives = 20/32 (62%)

Query: 375 DSGSSETPTAITEALTDLSSTTSEPISTEAVS 406
           + GSS + T   E++ D S+  S P++++ VS
Sbjct: 563 EQGSSSSVTKSPESMPDPSAKASSPVTSKGVS 594


>SPBC19F8.05 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 218

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 104 KYIADENGFRPTIIQSSKNSGEIQFTSSVSEKTG 137
           KY+ DENG    I Q+ KN  ++ F    S++ G
Sbjct: 142 KYVVDENGLDDLIQQAFKNPNDV-FQPLPSKRDG 174


>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1236

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 370 TPVTTDSGSSETPTAITEALTDLSSTTSEPISTEAVSTTVVQDIPSSTLA 419
           T +++   SS  P+  +   + LSS+TS P ST   S ++     SST +
Sbjct: 558 TTISSGISSSSIPSTFSSVSSILSSSTSSPSST---SLSISSSSTSSTFS 604


  Database: spombe
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.305    0.123    0.328 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,025,678
Number of Sequences: 5004
Number of extensions: 30832
Number of successful extensions: 108
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 60
Number of HSP's gapped (non-prelim): 53
length of query: 440
length of database: 2,362,478
effective HSP length: 75
effective length of query: 365
effective length of database: 1,987,178
effective search space: 725319970
effective search space used: 725319970
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
S2: 55 (26.2 bits)