GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000335-TA|BGIBMGA000335-PA|IPR000618|Insect cuticle
protein
         (440 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    33   0.012
AF457553-1|AAL68783.1|  178|Anopheles gambiae mucin-like protein...    31   0.082
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           29   0.19 
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           29   0.25 
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           29   0.25 
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    27   0.77 
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           27   1.0  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           27   1.0  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    26   1.8  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     25   4.1  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    25   5.4  
AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           24   7.1  

>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 33.5 bits (73), Expect = 0.012
 Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 86  VQKGSYSYTAPDGTLITVKYIAD-ENGFRPTI 116
           V +GSYS   PDGT  TV Y AD  NGF   +
Sbjct: 48  VVQGSYSVVDPDGTKRTVDYTADPHNGFNAVV 79


>AF457553-1|AAL68783.1|  178|Anopheles gambiae mucin-like protein
           protein.
          Length = 178

 Score = 30.7 bits (66), Expect = 0.082
 Identities = 16/37 (43%), Positives = 21/37 (56%)

Query: 381 TPTAITEALTDLSSTTSEPISTEAVSTTVVQDIPSST 417
           T  A T A T  ++TTSE  +T A STT   D  ++T
Sbjct: 67  TSAATTTAATTSAATTSEATTTAAASTTQASDSDNTT 103


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 29.5 bits (63), Expect = 0.19
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 6/49 (12%)

Query: 369 NTPVTTDSGSSETP---TAITEALTDLSSTTSEPISTEAVSTTVVQDIP 414
           + P TT + S + P   T  T   TD ++TT+ P ST   +TT   D+P
Sbjct: 166 SAPTTTTTWSDQPPPPTTTTTTVWTDSTATTTTPAST---TTTTWSDLP 211


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 29.1 bits (62), Expect = 0.25
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 6/49 (12%)

Query: 369 NTPVTTDSGSSETP---TAITEALTDLSSTTSEPISTEAVSTTVVQDIP 414
           + P TT + S + P   T  T   TD ++TT+ P ST   +TT   D+P
Sbjct: 165 SAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPAST---TTTTWSDLP 210


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 29.1 bits (62), Expect = 0.25
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 6/49 (12%)

Query: 369 NTPVTTDSGSSETP---TAITEALTDLSSTTSEPISTEAVSTTVVQDIP 414
           + P TT + S + P   T  T   TD ++TT+ P ST   +TT   D+P
Sbjct: 165 SAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPAST---TTTTWSDLP 210


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 27.5 bits (58), Expect = 0.77
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 375 DSGSSETPTAIT-EALTDLSSTTSEPISTEAVSTTVVQDIPSST 417
           DS SS T    T E   DL    SE + +++ +TTVV    SST
Sbjct: 503 DSLSSNTIAGSTGERFQDLGPAASESVRSQSNNTTVVSTPSSST 546


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 27.1 bits (57), Expect = 1.0
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 6/49 (12%)

Query: 369 NTPVTTDSGSSETP---TAITEALTDLSSTTSEPISTEAVSTTVVQDIP 414
           + P TT + S + P   T  T   TD ++TT+ P  T   +TT   D+P
Sbjct: 166 SAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPAPT---TTTTWSDLP 211


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 27.1 bits (57), Expect = 1.0
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 6/49 (12%)

Query: 369 NTPVTTDSGSSETP---TAITEALTDLSSTTSEPISTEAVSTTVVQDIP 414
           + P TT + S + P   T  T   TD ++TT+ P  T   +TT   D+P
Sbjct: 166 SAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPAPT---TTTTWSDLP 211


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 26.2 bits (55), Expect = 1.8
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 375 DSGSSETPTAIT-EALTDLSSTTSEPISTEAVSTTVVQDIPSST 417
           DS SS T    T E   DL+   SE + +++ +TTVV   PSS+
Sbjct: 511 DSLSSNTIAGSTGERFQDLAPAASESVRSQSNNTTVV-STPSSS 553


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 25.0 bits (52), Expect = 4.1
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 370 TPVTTD-SGSSETPTAITEALTDLSSTTSEPISTEAVSTT 408
           +P T + S ++E  T   EA T   +TT+E  +T   +TT
Sbjct: 130 SPTTAEASTTTEAATTTQEATTTEEATTTEEATTTEKATT 169



 Score = 25.0 bits (52), Expect = 4.1
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 373 TTDSGSSETPTAITEALTDLSSTTSEPISTEAVSTTVVQ 411
           T ++ ++E  T   EA T   +TT+E  +T   +TT  +
Sbjct: 146 TQEATTTEEATTTEEATTTEKATTTEEATTTEEATTTAE 184



 Score = 24.6 bits (51), Expect = 5.4
 Identities = 12/36 (33%), Positives = 21/36 (58%)

Query: 373 TTDSGSSETPTAITEALTDLSSTTSEPISTEAVSTT 408
           T ++ ++E  T   +A T   +TT+E  +T A +TT
Sbjct: 152 TEEATTTEEATTTEKATTTEEATTTEEATTTAEATT 187


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 5.4
 Identities = 12/46 (26%), Positives = 20/46 (43%)

Query: 369 NTPVTTDSGSSETPTAITEALTDLSSTTSEPISTEAVSTTVVQDIP 414
           + P TT + S + P   T   T  +  T+   +    +TT   D+P
Sbjct: 166 SAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTHAPTTTTTWSDLP 211


>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 24.2 bits (50), Expect = 7.1
 Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 371 PVTTDSGSSETPTAITEALTDLSSTTSEPISTE-AVSTTVVQDIPSSTLA 419
           P TT + +  T T +    T  ++  S P++T  +  TT     P    A
Sbjct: 45  PTTTTTVAPTTTTTVAPGQTTTTTVASGPVTTTGSTDTTTPSSAPQDVKA 94


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.305    0.123    0.328 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,217
Number of Sequences: 2123
Number of extensions: 6482
Number of successful extensions: 37
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 22
length of query: 440
length of database: 516,269
effective HSP length: 66
effective length of query: 374
effective length of database: 376,151
effective search space: 140680474
effective search space used: 140680474
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
S2: 49 (23.8 bits)