Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000334-TA|BGIBMGA000334-PA|IPR000618|Insect cuticle
protein
         (136 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    23   0.98 
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    23   1.3  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   2.3  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 0.98
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 62  KKASGPDASDVIIAQGAFSYTAPDGTVISLNY 93
           K+  GP      + Q +  Y   DG+VI  NY
Sbjct: 330 KEVPGPCCVPTQLGQMSMLYLGSDGSVILKNY 361


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 2   TMKSIFLFGLVXXXXXXPQPQKSD 25
           T  S+F++G+       P+P+K D
Sbjct: 83  TFLSLFIYGMHHNEKYFPEPEKFD 106


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 10/24 (41%), Positives = 12/24 (50%)

Query: 40  DGSYQFSYETDNGIKAEETGSLKK 63
           DG Y+  YE D+     E  S KK
Sbjct: 121 DGIYRKQYEIDDDYDYSELDSAKK 144


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.312    0.131    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,299
Number of Sequences: 317
Number of extensions: 1077
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 136
length of database: 114,650
effective HSP length: 51
effective length of query: 85
effective length of database: 98,483
effective search space:  8371055
effective search space used:  8371055
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.5 bits)
S2: 39 (19.8 bits)