Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000334-TA|BGIBMGA000334-PA|IPR000618|Insect cuticle
protein
(136 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0437 - 28986459-28986524,28986606-28986731,28986842-289869... 28 2.3
11_06_0249 + 21697863-21697923,21698119-21698128,21698160-216987... 28 3.0
05_05_0149 - 22733703-22736216 27 4.0
06_02_0250 + 13474806-13475130,13475232-13475572 27 5.3
04_04_1216 + 31811403-31812267,31813187-31813877,31813981-318141... 27 5.3
09_01_0022 + 426649-426663,427170-427420,427479-427577,428321-42... 27 6.9
07_03_1137 - 24220597-24220619,24220694-24221414,24221513-242217... 27 6.9
02_02_0307 - 8809724-8811589,8811681-8811762,8812130-8812242,881... 27 6.9
>02_05_0437 -
28986459-28986524,28986606-28986731,28986842-28986941,
28987583-28987660,28987857-28987937,28989488-28989624,
28989693-28989743,28989785-28989878,28990091-28990260
Length = 300
Score = 28.3 bits (60), Expect = 2.3
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 40 DGSYQFSYETDNGIKAEETGSL 61
DGSY F++ T GI+A ++G +
Sbjct: 171 DGSYYFAFYTTGGIEARDSGKI 192
>11_06_0249 +
21697863-21697923,21698119-21698128,21698160-21698766,
21699011-21699090,21699182-21699263,21699357-21699428,
21700128-21700406
Length = 396
Score = 27.9 bits (59), Expect = 3.0
Identities = 13/58 (22%), Positives = 30/58 (51%)
Query: 19 PQPQKSDQTAEIIKQDFDQQVDGSYQFSYETDNGIKAEETGSLKKASGPDASDVIIAQ 76
P Q+S EI+ Q F++++D + + +DN +++T + P +V++ +
Sbjct: 20 PGYQQSSMGIEIVPQSFNEELDSTVTITPASDNIDVSDDTSVPHPSEVPATVNVVLVE 77
>05_05_0149 - 22733703-22736216
Length = 837
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/58 (24%), Positives = 25/58 (43%)
Query: 20 QPQKSDQTAEIIKQDFDQQVDGSYQFSYETDNGIKAEETGSLKKASGPDASDVIIAQG 77
Q + S+ T++ K+ +DGS + D G + +G D D I+ +G
Sbjct: 435 QEEDSEVTSQYAKKQTSDSIDGSKNEVEKQDKGSEGPLVQQHPDTNGSDGEDKILLEG 492
>06_02_0250 + 13474806-13475130,13475232-13475572
Length = 221
Score = 27.1 bits (57), Expect = 5.3
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 19 PQPQKSDQTAEIIKQDFDQQVDGSYQFSYETDNGIKAEETGSLKKASGPDA 69
P +KS ++A+ D DQ ++G+Y Y + NG K K AS +A
Sbjct: 143 PPSKKSKRSADGENADDDQGMNGNYGNGYGSGNG-KGNGGAKKKTASRSEA 192
>04_04_1216 +
31811403-31812267,31813187-31813877,31813981-31814131,
31814289-31814351,31814590-31814664,31814934-31815032
Length = 647
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 80 SYTAPDGTVISLNYVADDDGGFKP 103
SY APD SL +D DGG +P
Sbjct: 89 SYEAPDAPSFSLGIDSDGDGGDEP 112
>09_01_0022 +
426649-426663,427170-427420,427479-427577,428321-428473,
428893-429051,429146-429287,429460-429544,429629-429670,
429784-429832,430540-430639,431240-431287
Length = 380
Score = 26.6 bits (56), Expect = 6.9
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 42 SYQFSYETDNGIKAEETGSLKKASGPDASDVIIAQGAFSYTAPDGTVISLNYVADDDG 99
SY Y ++ +ET LK ASG V+I Q A + +IS V+ DDG
Sbjct: 73 SYNGDYGENSKQATKETSLLKYASGLPCKPVLIGQFRRPVLACENCLIS--RVSKDDG 128
>07_03_1137 -
24220597-24220619,24220694-24221414,24221513-24221731,
24221805-24222505,24223127-24223376
Length = 637
Score = 26.6 bits (56), Expect = 6.9
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 37 QQVDGSYQFS-YETDNGIKAEETGSLKKASGPDASDVIIAQ 76
Q DG E D G+ E++GSL+K + ++I+Q
Sbjct: 444 QSTDGRTSIGDAELDGGVSREDSGSLEKHRADEDVKIVISQ 484
>02_02_0307 - 8809724-8811589,8811681-8811762,8812130-8812242,
8812361-8812492,8812681-8812864,8813002-8813135,
8813552-8813656,8813738-8813839,8813930-8814022,
8814136-8814456,8814595-8814696,8814791-8814853,
8815213-8815708,8815964-8816124,8816213-8816743,
8817077-8817118,8817203-8817334,8817639-8817703,
8817858-8818169,8818262-8818334,8818425-8818517,
8819440-8819501,8819740-8819809
Length = 1777
Score = 26.6 bits (56), Expect = 6.9
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 37 QQVDGSYQFSYETDNGIKAEETGSLKKASGPDASDVIIAQGAFSYTAPD 85
++ DG+ Q S + ++ETG K ++ D V++A S T P+
Sbjct: 1403 KEKDGAVQVSPKDSTSQGSKETGEGKSSNPDDEQTVVLAGSNQSETQPE 1451
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.312 0.131 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,085,058
Number of Sequences: 37544
Number of extensions: 165338
Number of successful extensions: 277
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 270
Number of HSP's gapped (non-prelim): 9
length of query: 136
length of database: 14,793,348
effective HSP length: 75
effective length of query: 61
effective length of database: 11,977,548
effective search space: 730630428
effective search space used: 730630428
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 55 (26.2 bits)
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