GeneModel BLAST Result against arabidopsis

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000334-TA|BGIBMGA000334-PA|IPR000618|Insect cuticle
protein
         (136 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g09980.1 68417.m01634 methyltransferase MT-A70 family protein...    28   1.9  
At3g53380.1 68416.m05891 lectin protein kinase family protein co...    28   2.5  
At5g64030.1 68418.m08039 dehydration-responsive protein-related ...    27   4.4  
At5g03540.1 68418.m00310 exocyst subunit EXO70 family protein co...    27   5.9  
At4g01870.1 68417.m00245 tolB protein-related contains weak simi...    26   7.7  
At2g41960.1 68415.m05191 expressed protein                             26   7.7  

>At4g09980.1 68417.m01634 methyltransferase MT-A70 family protein
           low similarity to SP|P25583 Karyogamy protein KAR4
           {Saccharomyces cerevisiae},
           (N6-adenosine)-methyltransferase [Mus musculus]
           GI:10179948; contains Pfam profile PF05063: MT-A70
           (S-adenosylmethionine-binding subunit of human mRNA:m6A
           methyl-transferase (MTase))
          Length = 775

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 36  DQQVDGSYQFSYETDNGIKAEETGS-LKKASGPDASDVIIAQGAFSYT-APDGTVISLNY 93
           D+ +  S +       G+K ++ GS LKK SG D S+V+   G  + +  PD       Y
Sbjct: 136 DRSLKTSSRDEKSKSRGVKDDDRGSPLKKTSGKDGSEVVREVGRSNRSKTPDADYEKEKY 195

Query: 94  VADDD 98
              D+
Sbjct: 196 SRKDE 200


>At3g53380.1 68416.m05891 lectin protein kinase family protein
           contains Pfam domains, PF00069: Protein kinase domain,
           PF00138: Legume lectins alpha domain, and PF00139:
           Legume lectins beta domain
          Length = 715

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query: 45  FSYETDNGIKAEETGSLKKASGPDASDVIIAQGAFSYTAPDGT 87
           FS+   N   +   G L     PDA+ + IA G+   T P+G+
Sbjct: 86  FSFSITNVNPSSIGGGLAFVISPDANSIGIAGGSLGLTGPNGS 128


>At5g64030.1 68418.m08039 dehydration-responsive protein-related
           similar to early-responsive to dehydration stress ERD3
           protein [Arabidopsis thaliana] GI:15320410; contains
           Pfam profile PF03141: Putative methyltransferase
          Length = 829

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 1/84 (1%)

Query: 21  PQKSDQTAEIIKQDFDQQVDGSYQFSYETDNGIKAEETGSLKKASGPDASDVIIAQGAFS 80
           P  +++  +   +D +   DG  Q  +E+DNG K +     KK+S  D  +    +   +
Sbjct: 166 PDTNEKQTKPETEDNELGEDGENQKQFESDNGEK-KSIDDDKKSSDDDKENKTGNEDTET 224

Query: 81  YTAPDGTVISLNYVADDDGGFKPE 104
            T  + T  +++   + +G  K E
Sbjct: 225 KTEKENTETNVDVQVEQEGQSKNE 248


>At5g03540.1 68418.m00310 exocyst subunit EXO70 family protein
           contains Pfam domain PF03081: Exo70 exocyst complex
           subunit
          Length = 638

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 12/23 (52%), Positives = 13/23 (56%)

Query: 85  DGTVISLNYVADDDGGFKPEGAH 107
           DG   SL   +D DGG KP G H
Sbjct: 164 DGLPNSLRPSSDGDGGGKPHGGH 186


>At4g01870.1 68417.m00245 tolB protein-related contains weak
           similarity to TolB protein precursor (Swiss-Prot:P44677)
           [Haemophilus influenzae]
          Length = 652

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 11/26 (42%), Positives = 18/26 (69%)

Query: 77  GAFSYTAPDGTVISLNYVADDDGGFK 102
           G+F  ++P+G +I+LN   D +GG K
Sbjct: 342 GSFPSSSPNGDLIALNSDFDINGGIK 367


>At2g41960.1 68415.m05191 expressed protein 
          Length = 1215

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 10/81 (12%)

Query: 37  QQVDGSYQFSYETDNGIKAEETG------SLKKASGPDASDVIIAQGAFSYTAP----DG 86
           ++ +GS     +T+N I+ EE+G       L     PD  D     G  S        D 
Sbjct: 558 REEEGSRNLDEDTNNTIRCEESGIENGDVDLSSPGSPDDQDEECLDGCISPRVETHSCDS 617

Query: 87  TVISLNYVADDDGGFKPEGAH 107
           T   +    D++G F P  AH
Sbjct: 618 TDKEIIDHEDENGCFTPRPAH 638


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.312    0.131    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,118,206
Number of Sequences: 28952
Number of extensions: 120274
Number of successful extensions: 193
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 190
Number of HSP's gapped (non-prelim): 6
length of query: 136
length of database: 12,070,560
effective HSP length: 74
effective length of query: 62
effective length of database: 9,928,112
effective search space: 615542944
effective search space used: 615542944
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 55 (26.2 bits)