Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000333-TA|BGIBMGA000333-PA|IPR000618|Insect cuticle
protein
(174 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical pr... 31 0.59
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr... 29 1.8
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ... 29 1.8
AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical ... 29 1.8
U51998-6|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 2.4
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 28 3.2
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 28 3.2
AF098985-5|AAC67418.1| 99|Caenorhabditis elegans Hypothetical ... 28 3.2
U41277-4|AAA82475.1| 277|Caenorhabditis elegans Hypothetical pr... 28 4.2
U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family... 27 5.5
U41036-5|AAV28332.1| 475|Caenorhabditis elegans Hypothetical pr... 27 7.3
AF125459-12|AAD12832.1| 533|Caenorhabditis elegans Hypothetical... 27 7.3
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z11126-7|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 27 9.6
U40947-1|AAC48068.1| 610|Caenorhabditis elegans Hypothetical pr... 27 9.6
U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical pr... 27 9.6
AL033514-7|CAA22096.2| 373|Caenorhabditis elegans Hypothetical ... 27 9.6
>Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical protein
R09H10.5 protein.
Length = 1603
Score = 30.7 bits (66), Expect = 0.59
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 118 QGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVPEQIARAL 163
Q + W + P++VNY Q G +P SP +QI AL
Sbjct: 1271 QVNMIWMGADLTPVNVNYYYAAIARQSNGRVLPVSPLQTQQILSAL 1316
>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 29.1 bits (62), Expect = 1.8
Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Query: 37 PFVSVTTPTPFLPIPISSVAPVRVVPKVSEGYGAETVKFGNEINPDGSYTYFYETNNGIA 96
P S P P LP P SV ++ P+ + G++ +K +E S TY A
Sbjct: 812 PIASNPPPPPPLPPPPPSVEKKKLEPQDRDIAGSKIIKKNSE-----SSTYGGSVRPVSA 866
Query: 97 AQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNY 135
A++ P PP VP S++ + P S +Y
Sbjct: 867 AKDIEKPAPQRSLPPLVPNAGGSSWNNQNRPESPRSASY 905
>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 29.1 bits (62), Expect = 1.8
Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Query: 37 PFVSVTTPTPFLPIPISSVAPVRVVPKVSEGYGAETVKFGNEINPDGSYTYFYETNNGIA 96
P S P P LP P SV ++ P+ + G++ +K +E S TY A
Sbjct: 812 PIASNPPPPPPLPPPPPSVEKKKLEPQDRDIAGSKIIKKNSE-----SSTYGGSVRPVSA 866
Query: 97 AQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNY 135
A++ P PP VP S++ + P S +Y
Sbjct: 867 AKDIEKPAPQRSLPPLVPNAGGSSWNNQNRPESPRSASY 905
>AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical
protein F52G3.1 protein.
Length = 1172
Score = 29.1 bits (62), Expect = 1.8
Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 5/56 (8%)
Query: 108 GNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVPEQIARAL 163
G P PVV QG W+ + P A E PT A PP P Q A L
Sbjct: 70 GQDPTTPVVPQGGTGWSKSDN-PNG----AAEPPQTPTNQAPAVPPPPPPQPANDL 120
>U51998-6|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.7 bits (61), Expect = 2.4
Identities = 28/129 (21%), Positives = 42/129 (32%), Gaps = 1/129 (0%)
Query: 33 STYRPFVSVTTPTPFLPIP-ISSVAPVRVVPKVSEGYGAETVKFGNEINPDGSYTYFYET 91
ST P +VT PT P+P ++ P G T G P + T T
Sbjct: 476 STMSPPTTVTVPTTPTPVPTTTNTPPANPTTATPTTVGTMTPSTGTTTVPVPTTTGSPTT 535
Query: 92 NNGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPT 151
+ VP + P V T+ ++ V P+ +PT
Sbjct: 536 QTTAPVTKPTVPSSTTQTAPPVTTPTSQPPVTTTSLLTTLTTPTVPVTTTVVPSSATVPT 595
Query: 152 SPPVPEQIA 160
+PP +A
Sbjct: 596 TPPTTVTVA 604
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 28.3 bits (60), Expect = 3.2
Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 80 NPDGSYTYFYETNNGIAAQEQGVPRN-LGGNPPAVPVVAQGSFSWTSPEGVPISVNYVAD 138
N DG + F E G + G P L P+ ++ G +S +SP+ S +Y
Sbjct: 1535 NTDGGASPFNE--GGWSPASPGDPLGALSPRTPSYGGMSPGVYSPSSPQFSMTSPHYSPT 1592
Query: 139 ENGYQPTGNAIPTSPPVPEQIARALAY 165
Y PT A SP P + +Y
Sbjct: 1593 SPSYSPTSPAAGQSPVSPSYSPTSPSY 1619
Score = 27.5 bits (58), Expect = 5.5
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 109 NPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
+P A S+S TSP P S +Y Y PT + PTSP
Sbjct: 1600 SPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1645
Score = 27.1 bits (57), Expect = 7.3
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1618 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1652
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 28.3 bits (60), Expect = 3.2
Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 80 NPDGSYTYFYETNNGIAAQEQGVPRN-LGGNPPAVPVVAQGSFSWTSPEGVPISVNYVAD 138
N DG + F E G + G P L P+ ++ G +S +SP+ S +Y
Sbjct: 1542 NTDGGASPFNE--GGWSPASPGDPLGALSPRTPSYGGMSPGVYSPSSPQFSMTSPHYSPT 1599
Query: 139 ENGYQPTGNAIPTSPPVPEQIARALAY 165
Y PT A SP P + +Y
Sbjct: 1600 SPSYSPTSPAAGQSPVSPSYSPTSPSY 1626
Score = 27.5 bits (58), Expect = 5.5
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 109 NPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
+P A S+S TSP P S +Y Y PT + PTSP
Sbjct: 1607 SPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1652
Score = 27.1 bits (57), Expect = 7.3
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1625 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1659
>AF098985-5|AAC67418.1| 99|Caenorhabditis elegans Hypothetical
protein C08G5.5 protein.
Length = 99
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 126 PEGVP--ISVNYVADENGYQPTGNAIPTSPPVPEQIARALAYIA 167
P G+P +S +Y A PT P++PP+P + AY A
Sbjct: 44 PSGLPPMVSESYSAPYAQAPPTSTGYPSAPPMPRPSSPPPAYSA 87
>U41277-4|AAA82475.1| 277|Caenorhabditis elegans Hypothetical
protein C06E4.3 protein.
Length = 277
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 77 NEINPDGSYTYFYETNNGIAAQE-QGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNY 135
N +NP T F+E+ G++ +E Q +G N A+P G PE + ++ +
Sbjct: 189 NTVNPGVVATGFHESCTGLSTEESQKFYDKVGANKSAIPCGFSG-----RPEHIAKAIAF 243
Query: 136 VADEN 140
+AD +
Sbjct: 244 LADRD 248
>U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family
protein 5, isoforma protein.
Length = 1544
Score = 27.5 bits (58), Expect = 5.5
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Query: 49 PIPISSVAPVRVVPKVSEGYGAETVKFGNEINPD--GSYTYFYE--TNNGIAAQEQGVPR 104
P +++V V V P SE YG E + I PD G ++ E + N I E +
Sbjct: 542 PDTVATVPTVTVAPDYSEEYGQEASSSSSTILPDVQGVWSEISELPSENPITYTESPITE 601
Query: 105 NLGGNPPAVPVVA 117
+ P P A
Sbjct: 602 STAPAPETSPETA 614
>U41036-5|AAV28332.1| 475|Caenorhabditis elegans Hypothetical
protein T14E8.4 protein.
Length = 475
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 20 YENEFYKKNPYRYSTYRPFVSVTTPTPFLPIPISSVAPV 58
+ + +Y K P S P + TPTP + P+ +V+P+
Sbjct: 391 FVSPWYLKTP---SHIPPEIEFATPTPLISSPLEAVSPI 426
>AF125459-12|AAD12832.1| 533|Caenorhabditis elegans Hypothetical
protein Y25C1A.4 protein.
Length = 533
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 90 ETNNGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTG 146
+ +NG+ A Q L + P + A+G F + E VP N+VA + G
Sbjct: 472 QPDNGVTALNQNCALLLASSQPYID--ARGRFYAATMEDVPCVANFVASNEARRTRG 526
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 26.6 bits (56), Expect = 9.6
Identities = 27/107 (25%), Positives = 35/107 (32%), Gaps = 1/107 (0%)
Query: 53 SSVAPVRVVPKVSEGY-GAETVKFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPP 111
S AP S GY G+E P G Y+ A G + P
Sbjct: 526 SEAAPEAAPAAPSGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAPAAPSGGYSGSESSAP 585
Query: 112 AVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVPEQ 158
A P A S ++ G S ++ +G T A P P P Q
Sbjct: 586 AAPEPAPSSGGYSGGGGDAGSAAGGSNYSGGGETAPAAPPPAPEPAQ 632
>Z11126-7|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 26.6 bits (56), Expect = 9.6
Identities = 27/107 (25%), Positives = 35/107 (32%), Gaps = 1/107 (0%)
Query: 53 SSVAPVRVVPKVSEGY-GAETVKFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPP 111
S AP S GY G+E P G Y+ A G + P
Sbjct: 526 SEAAPEAAPAAPSGGYSGSEAAPEAAPAAPSGGYSGSEAAPEAAPAAPSGGYSGSESSAP 585
Query: 112 AVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVPEQ 158
A P A S ++ G S ++ +G T A P P P Q
Sbjct: 586 AAPEPAPSSGGYSGGGGDAGSAAGGSNYSGGGETAPAAPPPAPEPAQ 632
>U40947-1|AAC48068.1| 610|Caenorhabditis elegans Hypothetical
protein R03E9.2 protein.
Length = 610
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 48 LPIPISSVAPVRVVPKVSEGYGAETVKFGNEINPDGSYTYFYETN 92
+P+ +S+V V +V ++ YG + + I P T+ + N
Sbjct: 1 MPVIVSAVVAVGIVISIAGSYGVQKYRIKYVIPPQQEKTFLFPFN 45
>U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical
protein F56D3.1 protein.
Length = 441
Score = 26.6 bits (56), Expect = 9.6
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 24 FYKKNPYRYSTYRPFVSVTTPT--PFLPIPISSVAPVRVVPKV 64
F + P ++T P +VT PF+P ++++AP V P+V
Sbjct: 133 FVQTTPATFATLPPAPAVTRAPIQPFVPQTVATIAPSFVRPQV 175
>AL033514-7|CAA22096.2| 373|Caenorhabditis elegans Hypothetical
protein Y75B8A.6 protein.
Length = 373
Score = 26.6 bits (56), Expect = 9.6
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Query: 101 GVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVPEQIA 160
G P N GG PP P + Q P V + + + +N P A +PPVP +
Sbjct: 7 GAPMN-GGPPP--PQMLQ--MHHPLPHHVAVFAHGSSSQNSQAPPLQAASATPPVPSSMN 61
Query: 161 RA 162
R+
Sbjct: 62 RS 63
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.313 0.134 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,850,477
Number of Sequences: 27539
Number of extensions: 241473
Number of successful extensions: 551
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 518
Number of HSP's gapped (non-prelim): 45
length of query: 174
length of database: 12,573,161
effective HSP length: 77
effective length of query: 97
effective length of database: 10,452,658
effective search space: 1013907826
effective search space used: 1013907826
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 56 (26.6 bits)
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