Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000333-TA|BGIBMGA000333-PA|IPR000618|Insect cuticle
protein
(174 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.22
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 29 0.38
SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2 |Schiz... 29 0.38
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 27 1.2
SPAC12G12.03 |cip2||RNA-binding protein Cip2|Schizosaccharomyces... 27 2.0
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 3.6
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 3.6
SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos... 25 4.7
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 25 6.2
SPCC736.10c |mrps8||mitochondrial ribosomal protein subunit S8|S... 25 6.2
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 25 6.2
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 25 8.2
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.9 bits (64), Expect = 0.22
Identities = 27/119 (22%), Positives = 42/119 (35%), Gaps = 2/119 (1%)
Query: 40 SVTTP-TPFLPIPISSVAPVRVVPKVSEGYGAETVKFGNEINPDGSYTYFYETNNGIAAQ 98
S++TP TP +P +S + + P + + + T T N
Sbjct: 242 SLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNSTTPV 301
Query: 99 EQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSPPVP 156
VP + P A S + TS +P + PTGN+ P +P VP
Sbjct: 302 TPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVP 360
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 29.1 bits (62), Expect = 0.38
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y A Y PT + PTSP
Sbjct: 1591 SYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSP 1625
Score = 27.5 bits (58), Expect = 1.2
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1605 SYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1639
Score = 27.1 bits (57), Expect = 1.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1612 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1646
Score = 27.1 bits (57), Expect = 1.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1619 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1653
Score = 27.1 bits (57), Expect = 1.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1626 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1660
Score = 27.1 bits (57), Expect = 1.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1633 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1667
Score = 27.1 bits (57), Expect = 1.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1640 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1674
Score = 27.1 bits (57), Expect = 1.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1647 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1681
Score = 27.1 bits (57), Expect = 1.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1654 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1688
Score = 27.1 bits (57), Expect = 1.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1661 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1695
Score = 27.1 bits (57), Expect = 1.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1668 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1702
Score = 27.1 bits (57), Expect = 1.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1675 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1709
Score = 27.1 bits (57), Expect = 1.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1682 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1716
Score = 27.1 bits (57), Expect = 1.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1689 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1723
Score = 27.1 bits (57), Expect = 1.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1696 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1730
Score = 27.1 bits (57), Expect = 1.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1703 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1737
Score = 27.1 bits (57), Expect = 1.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1710 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1744
Score = 27.1 bits (57), Expect = 1.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1717 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1751
Score = 24.6 bits (51), Expect = 8.2
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 124 TSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
TSP +P S +Y Y PT + PTSP
Sbjct: 1567 TSPAYMPSSPSYSPTSPSYSPTSPSYSPTSP 1597
Score = 24.6 bits (51), Expect = 8.2
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPP 154
S+S TSP P S +Y Y PT + + P
Sbjct: 1577 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSP 1611
>SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 29.1 bits (62), Expect = 0.38
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 33 STYRPFVSVTTPTPFLPIPISSVAPVRVVPKVSE 66
S+Y SV+TP P PI IS P PK+S+
Sbjct: 304 SSYPLSRSVSTPVPMSPISISPAKPSPQSPKLSQ 337
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 27.5 bits (58), Expect = 1.2
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 12/104 (11%)
Query: 56 APVRVVPKVSEGYGAETVKFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPV 115
AP + Y ++ + NP SY N GI A G+P G P VP
Sbjct: 99 APAAINNNFGYSYVGQSSQPVPSYNPLPSYNTASLPNAGIPAAMPGMP---SGYPGTVP- 154
Query: 116 VAQGSFS--WTSP--EGVPI-SVN---YVADENGYQPTGNAIPT 151
+ QG ++ ++SP G PI +VN + + QP N +P+
Sbjct: 155 IPQGGYNAHYSSPYNNGYPIGAVNPTSAIPAQPPAQPVNNVLPS 198
>SPAC12G12.03 |cip2||RNA-binding protein Cip2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 576
Score = 26.6 bits (56), Expect = 2.0
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 114 PVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVPEQIARALAYIAKNIP-- 171
P + +F+ S VP S + A G + + T+PP P++ A + KNIP
Sbjct: 185 PFDSLNAFNEPSHSHVPNSASSTALSRGM--SNSVTLTAPPEPDEETIPTAIVIKNIPFS 242
Query: 172 LKK 174
LKK
Sbjct: 243 LKK 245
>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 25.8 bits (54), Expect = 3.6
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 57 PVRVVPKVSEGYGAETVKFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVV 116
P VP V+ GA + P+ +Y+ +N+ A E GG PP+VP +
Sbjct: 540 PAPPVPSVNNA-GARLTLRDSGAAPEATYSLRQPSNH--AYSEGRSYTFTGGQPPSVPTM 596
Query: 117 AQGS 120
GS
Sbjct: 597 PYGS 600
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.8 bits (54), Expect = 3.6
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Query: 110 PPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVPEQIARA 162
PP P+ + S + S P SVN VA++ A P PP P + A
Sbjct: 908 PPPPPLPVKTSLNTFSH---PDSVNIVANDTSVAGVMPAFPPPPPPPPPLVSA 957
>SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 601
Score = 25.4 bits (53), Expect = 4.7
Identities = 29/136 (21%), Positives = 47/136 (34%), Gaps = 6/136 (4%)
Query: 28 NPYRYSTYRPFVSVTTPTPFLPIPISSVAPVRVVPKVSEGYGAETVKFGNEINPDGSYTY 87
+P+ + P + P + P+ S + YG ++ + N +
Sbjct: 281 SPFFTAPVEPNQPLQPLRPSMTGPVPSSMGSEATLNMPSTYGIDSNLYTNSNSSSIVQNP 340
Query: 88 FYETNNGIAAQEQGVPRNLGGNPPAV--PVVAQGSF----SWTSPEGVPISVNYVADENG 141
G AA N + P+V P GS S G P S N V EN
Sbjct: 341 LQPARTGPAAINYNYTTNYSVSSPSVTNPFFDVGSSTQNASLMGSTGYPSSANNVYYENS 400
Query: 142 YQPTGNAIPTSPPVPE 157
YQ G ++ + +P+
Sbjct: 401 YQGVGTSMSDNYQLPD 416
>SPAC23D3.13c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1616
Score = 25.0 bits (52), Expect = 6.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 108 GNPPAVPVVAQGSFSWTSPEGV 129
GNPP+ GSF+ T PE +
Sbjct: 378 GNPPSSMEKVSGSFTGTKPEQI 399
>SPCC736.10c |mrps8||mitochondrial ribosomal protein subunit
S8|Schizosaccharomyces pombe|chr 3|||Manual
Length = 152
Score = 25.0 bits (52), Expect = 6.2
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 73 VKFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGN 109
V F N + P + ET +GI + + + NLGGN
Sbjct: 112 VSFVNGLEP--AEVGIVETKHGIMSIDDAIKNNLGGN 146
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 25.0 bits (52), Expect = 6.2
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 101 GVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIP 150
G+P G P AVP + G T+P G P S N N P G ++P
Sbjct: 534 GMPAPFPGYP-AVPAMP-GIPGATAPPGAPGSYNTSESSNLNAPPGVSMP 581
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 24.6 bits (51), Expect = 8.2
Identities = 16/53 (30%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Query: 27 KNPYRYSTYRPFVSVTTPTPFLPIPISSVAPVRV--VPKVSEGYGAETVKFGN 77
KN Y S P S P+ F +P+ S P VPK T N
Sbjct: 173 KNEYVLSPTSPTTSAAFPSSFSSLPLVSSKPTGTPFVPKSPPSSSPSTTNVSN 225
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.134 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 896,214
Number of Sequences: 5004
Number of extensions: 41468
Number of successful extensions: 105
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 78
Number of HSP's gapped (non-prelim): 34
length of query: 174
length of database: 2,362,478
effective HSP length: 68
effective length of query: 106
effective length of database: 2,022,206
effective search space: 214353836
effective search space used: 214353836
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 51 (24.6 bits)
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