Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000333-TA|BGIBMGA000333-PA|IPR000618|Insect cuticle
protein
(174 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.40
SB_24634| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00054) 31 0.40
SB_59064| Best HMM Match : Adeno_E1A (HMM E-Value=9.3) 30 1.2
SB_29018| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_36681| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 29 2.8
SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37) 28 3.7
SB_56163| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_34104| Best HMM Match : SH2 (HMM E-Value=1.6e-24) 28 4.9
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 28 4.9
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 28 4.9
SB_49826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_22167| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_15073| Best HMM Match : MED7 (HMM E-Value=2.1) 28 4.9
SB_5593| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 31.5 bits (68), Expect = 0.40
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 24 FYKKNPYRYS---TYRPFVSVTTPTPFLPIPISSVAPVRVVPKVSEG 67
+Y +PY+ + P + + P PF P+P+ +AP+ + + SEG
Sbjct: 120 WYCSSPYQVTFPLKVCPTLPIKLPPPFNPLPVQGIAPLPIKLRPSEG 166
>SB_24634| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00054)
Length = 1012
Score = 31.5 bits (68), Expect = 0.40
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 82 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 140
D + T + NN + QG P G P A G+ ++ P P+ + +
Sbjct: 522 DPAVTRKFPVNNRFQQRRQGAPSGFTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 581
Query: 141 GYQ-PTGNAIPT 151
GYQ PT N +PT
Sbjct: 582 GYQKPTTNQLPT 593
>SB_59064| Best HMM Match : Adeno_E1A (HMM E-Value=9.3)
Length = 336
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVPEQ 158
SF+ S EG P + E+ Q G+ IPTSPPV E+
Sbjct: 67 SFASVSEEGSPAKKIHFERED--QDPGDQIPTSPPVAER 103
>SB_29018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1047
Score = 29.5 bits (63), Expect = 1.6
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 81 PDGSYTYFYETNNGIAAQEQGVPRNLGGN--PPAVPVVAQGSFSWTSPEGVPISVNYVAD 138
P G Y + + G+ Q+ P ++ N PP +P+ A + P +P +
Sbjct: 671 PQGIPYYGPQASGGVIFQQGPYPSHMPANAPPPNIPIQANFPRNIPPPNYIPPTQQMSFQ 730
Query: 139 ENGY-QPTGNAIPTSPPVPE 157
+ Y +P N IPT V E
Sbjct: 731 HSPYNRPPPNVIPTGNMVIE 750
>SB_36681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1081
Score = 29.1 bits (62), Expect = 2.1
Identities = 26/109 (23%), Positives = 37/109 (33%), Gaps = 3/109 (2%)
Query: 51 PISSVAPVRVVPKVSEGYGAETVKFGNEINPDGSY--TYFYETNNGIAAQEQGVPRNLGG 108
P S+V P V S TV+ N + P + T E + + P N
Sbjct: 79 PTSTVEPTNTVEPTSTAEPTNTVEPTNTVEPTSTVEPTNTVEPTSTVEPTSTVEPTNTVE 138
Query: 109 NPPAV-PVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVP 156
V P S P + + V + +PT +PTS VP
Sbjct: 139 PTSTVEPTSTVEPTSTVVPTSTVVPTSTVEPTSTVEPTSTVVPTSTVVP 187
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 28.7 bits (61), Expect = 2.8
Identities = 17/70 (24%), Positives = 27/70 (38%)
Query: 87 YFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTG 146
+F + A Q P N+G P + + G S +P S + +D +G P G
Sbjct: 320 FFGAAGSPSAMSPQMTPWNMGATPAYMEAWSPGMGSGMTPGAASFSPSAASDASGMSPGG 379
Query: 147 NAIPTSPPVP 156
+ P P
Sbjct: 380 FSPSWMSPTP 389
Score = 28.7 bits (61), Expect = 2.8
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTG-----NAIPTSPPVPEQI 159
S+S TSP P S +Y Y P+ N PT PP+P I
Sbjct: 567 SYSPTSPSYSPTSPSYSPSSPSYSPSSPSFHHNLRPTPPPLPLSI 611
Score = 28.3 bits (60), Expect = 3.7
Identities = 31/116 (26%), Positives = 45/116 (38%), Gaps = 10/116 (8%)
Query: 43 TPTPFLPIPISSVAPVRVVPKV-SEGYGAETVKF-GNEINPDGSYTYFYETNNGIAAQEQ 100
+PTP P+ +P P S GY + F + + + + T+ G +
Sbjct: 386 SPTPGSPVSPGPTSPYIPSPAAASPGYSPSSPAFMPSSPSMSPASPSYSPTSPGYSPSSP 445
Query: 101 GVPRNLGGNPPAVPVVA--QGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
G PA P + S+S TSP P S +Y Y PT + PTSP
Sbjct: 446 S-----SGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 496
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 469 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 503
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 476 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 510
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 483 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 517
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 490 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 524
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 497 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 531
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 504 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 538
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 511 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 545
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 518 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 552
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 525 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 559
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 532 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 566
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 539 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 573
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 546 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 580
>SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37)
Length = 1052
Score = 28.3 bits (60), Expect = 3.7
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Query: 102 VPRNLGGNP---PAVPVVAQGSFSWT--SPEGVPISVNYVADENGYQPTGNAI-PTSP 153
+P N +P PA P S S+T SP P S +Y Y PT + PTSP
Sbjct: 728 IPSNSPASPSYSPASPSYTPASPSYTPASPSYTPASPSYTPTIPSYSPTSPSYSPTSP 785
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 117 AQGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
A S+S TSP P S +Y + Y P + PTSP
Sbjct: 685 ASPSYSPTSPSYSPASPSYTSASPSYSPASPSYSPTSP 722
>SB_56163| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 108 GNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPP 154
GNPP PV +F + P + Y A + P G ++P PP
Sbjct: 105 GNPPYPPVDQYSAFPY--PPQDQQAPPYPAQNQYWNPQGTSLPPPPP 149
>SB_34104| Best HMM Match : SH2 (HMM E-Value=1.6e-24)
Length = 421
Score = 27.9 bits (59), Expect = 4.9
Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 7/113 (6%)
Query: 37 PFVSVTTPTPFLPIPISSVAPVRVVPKVSEGYGA--ETVKFGNEINPDGSYTYFYETNNG 94
PF S +TP P P P PK E + A +TVK +
Sbjct: 183 PFPSTSTPPPLPGRPTLEPTPEASAPK-QESFEAIYDTVKMKKSSGYHNQFKAVQSQTFE 241
Query: 95 IAAQEQGVPRNLG-GNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTG 146
+ + + + LG GN V +G++ + E +P++V + ++ P G
Sbjct: 242 LKMENLSLGKELGHGN---FGSVLKGTYKMPNGERIPVAVKSLKSDDINNPKG 291
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 33 STYRPFVSVTTPTPFLPIPISSVAPVRVVP 62
ST P S++TPTPF P S PV P
Sbjct: 811 STGMPPASLSTPTPFFTHPGFSTKPVTTSP 840
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 33 STYRPFVSVTTPTPFLPIPISSVAPVRVVP 62
+T +P ++ TTP P PIS + P R P
Sbjct: 139 ATTKPVMTPTTPAPMTLPPISPIDPPRTQP 168
>SB_49826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 173
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 51 PISSVAPVRVVPKVSEGYGAETVKFGNEINPDGSYTYFYE 90
P SS+ V + S G ET + N NP G+ +E
Sbjct: 10 PYSSIHTVPITTIHSRNIGVETAQLANHTNPKGTLKCLHE 49
>SB_22167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1612
Score = 27.9 bits (59), Expect = 4.9
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 20 YENEFYKKNPYRYSTYRPFVSVTTPTPFLPIP--ISSVAPVRVVPKVSEGY 68
YE E K NPYR+ V + + F + +S +AP V+P VS Y
Sbjct: 256 YEGE--KSNPYRHLPNYVTVPYSDHSSFKELLRFVSGIAPAEVIPLVSSCY 304
>SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 139 ENGYQPTGNAIPTSPPVPEQ 158
EN YQP P SPP P+Q
Sbjct: 117 ENSYQPVELFAPNSPPKPQQ 136
>SB_15073| Best HMM Match : MED7 (HMM E-Value=2.1)
Length = 644
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 107 GGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGY 142
G P +PV + + W G PIS+N N Y
Sbjct: 146 GSLPDYIPVYSPETIVWGQSSGAPISINSSVIVNAY 181
>SB_5593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 113 VPVVAQGSFSWTSPEGVPISVNYVADENGY 142
+PV + G+ W G PIS+N N Y
Sbjct: 171 IPVYSPGTIVWGQSSGAPISINSSLIVNAY 200
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 27.5 bits (58), Expect = 6.4
Identities = 20/78 (25%), Positives = 26/78 (33%), Gaps = 6/78 (7%)
Query: 90 ETNNGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAI 149
ET +G PR P P S + T+PE S+ A E P
Sbjct: 449 ETTTAXXXXGRGYPR------PTAPETTTASLATTAPETTTASLVTTAPETTTAPEATLA 502
Query: 150 PTSPPVPEQIARALAYIA 167
P + PE +L A
Sbjct: 503 PEATTAPEAATASLVTTA 520
>SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 27.5 bits (58), Expect = 6.4
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 22 NEFYK-KNPYRYSTYRPFVSVTTPTPFLPIP-ISSVAPVRVVPKVS-EGYGAETVKFGNE 78
+EF K K R S SV +P P +P+P + + ++ KV+ +G K G E
Sbjct: 450 DEFLKTKGKARKSEASDGASVASPAPHIPVPQVKQMKEMKKKKKVAIDGKEKPKKKKGEE 509
Query: 79 INP 81
++P
Sbjct: 510 VDP 512
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 27.1 bits (57), Expect = 8.5
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 26 KKNPYRYSTYRPFVSVTTPTPFLPI--PISSVAPVR----VVPKVSEGYGAETVKFGN-- 77
+K R T +SV+ P P PI++ +P R VP + + + GN
Sbjct: 427 RKPVTRPKTTSGTLSVSKSIPPRPSTEPITTSSPYRHSWSYVPNFVDYHSPTSSHTGNVR 486
Query: 78 --EINPDGSYTYFYETNNGIAAQEQG--VPRNLGGNPPAV 113
E+NPDG+Y + T+ + G + +N+ G P V
Sbjct: 487 ILEVNPDGNYVRLFNTSAHRDEEIGGYMIQQNVAGRPVTV 526
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.134 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,428,873
Number of Sequences: 59808
Number of extensions: 303508
Number of successful extensions: 597
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 558
Number of HSP's gapped (non-prelim): 48
length of query: 174
length of database: 16,821,457
effective HSP length: 77
effective length of query: 97
effective length of database: 12,216,241
effective search space: 1184975377
effective search space used: 1184975377
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 57 (27.1 bits)
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