Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000333-TA|BGIBMGA000333-PA|IPR000618|Insect cuticle
protein
(174 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g28080.1 68417.m04027 expressed protein 32 0.19
At1g74510.2 68414.m08632 kelch repeat-containing F-box family pr... 30 0.99
At1g74510.1 68414.m08631 kelch repeat-containing F-box family pr... 30 0.99
At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest ... 29 1.7
At1g72110.1 68414.m08335 expressed protein 29 2.3
At1g26930.1 68414.m03283 kelch repeat-containing F-box family pr... 27 5.3
At1g09070.1 68414.m01012 C2 domain-containing protein / src2-lik... 27 5.3
At5g49360.1 68418.m06108 glycosyl hydrolase family 3 protein 27 7.0
At4g39980.1 68417.m05662 2-dehydro-3-deoxyphosphoheptonate aldol... 27 7.0
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 27 7.0
At5g06340.1 68418.m00710 diadenosine 5',5'''-P1,P4-tetraphosphat... 27 9.2
At3g53080.1 68416.m05850 galactose-binding lectin family protein... 27 9.2
>At4g28080.1 68417.m04027 expressed protein
Length = 1660
Score = 32.3 bits (70), Expect = 0.19
Identities = 26/63 (41%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 92 NNGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVN-YVADENGYQPTGNAIP 150
+NG A Q G PR + NP A + S W S G P+S N Y+A NG + T N P
Sbjct: 1498 SNGEANQFNG-PRIM--NPHAAEFIP--SQPWVS-NGYPVSPNGYLASPNGAEITQNGYP 1551
Query: 151 TSP 153
SP
Sbjct: 1552 LSP 1554
>At1g74510.2 68414.m08632 kelch repeat-containing F-box family
protein contains Pfam:PF01344 Kelch motif, Pfam:PF00646
F-box domain
Length = 451
Score = 29.9 bits (64), Expect = 0.99
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 63 KVSEGYGAETVKFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPP--AVPVVAQG 119
K S G E + FG EI Y Y TN + + VPR L G+ + V+A G
Sbjct: 185 KESLAVGTELLVFGKEIMSHVIYRYSILTNTWTSGMQMNVPRCLFGSASLGEIAVIAGG 243
>At1g74510.1 68414.m08631 kelch repeat-containing F-box family
protein contains Pfam:PF01344 Kelch motif, Pfam:PF00646
F-box domain
Length = 451
Score = 29.9 bits (64), Expect = 0.99
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 63 KVSEGYGAETVKFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPP--AVPVVAQG 119
K S G E + FG EI Y Y TN + + VPR L G+ + V+A G
Sbjct: 185 KESLAVGTELLVFGKEIMSHVIYRYSILTNTWTSGMQMNVPRCLFGSASLGEIAVIAGG 243
>At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest
subunit (RPB205) (RPII) (RPB1) nearly identical to
P|P18616 DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6) {Arabidopsis thaliana}
Length = 1840
Score = 29.1 bits (62), Expect = 1.7
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 91 TNNGIAAQEQGVPRNLGGNPPAVPVVAQGS--FSWTSPEGVPISVNYVADENGYQPTGNA 148
T+ G + G G P P + S +S TSP P S +Y Y PT +
Sbjct: 1555 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPS 1614
Query: 149 I-PTSP 153
PTSP
Sbjct: 1615 YSPTSP 1620
Score = 29.1 bits (62), Expect = 1.7
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSPPVPEQIAR---ALAYIAKNIPL 172
S+S TSP P S Y Y PT + PTSP Q A+ ++AY N L
Sbjct: 1691 SYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARL 1747
Score = 28.7 bits (61), Expect = 2.3
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 6/72 (8%)
Query: 83 GSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGY 142
G + ++ G + G G P P +S TSP P S Y GY
Sbjct: 1533 GGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSP-----GYSPTSPGYSPTSPTYSPSSPGY 1587
Query: 143 QPTGNAI-PTSP 153
PT A PTSP
Sbjct: 1588 SPTSPAYSPTSP 1599
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT A PTSP
Sbjct: 1614 SYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 1648
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT A PTSP
Sbjct: 1621 SYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSP 1655
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT A PTSP
Sbjct: 1670 SYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 1704
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S Y GY PT + PTSP
Sbjct: 1684 SYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSP 1718
Score = 27.5 bits (58), Expect = 5.3
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 6/97 (6%)
Query: 62 PKVSEGYGAETVKFGNEINPDGSYTY--FYETNNGIAAQEQGVPRNLGGNPPAVPVVA-- 117
P S GY + + + +P S T + T+ G + + G P P +
Sbjct: 1539 PSSSPGYSPSSPGY-SPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 1597
Query: 118 QGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1598 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1634
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1607 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1641
Score = 27.1 bits (57), Expect = 7.0
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S Y Y PT A PTSP
Sbjct: 1628 SYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSP 1662
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT + PTSP
Sbjct: 1663 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1697
Score = 26.6 bits (56), Expect = 9.2
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 120 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 153
S+S TSP P S +Y Y PT PTSP
Sbjct: 1677 SYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSP 1711
>At1g72110.1 68414.m08335 expressed protein
Length = 479
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 68 YGAETVKFGNEINPDGSYTYFYETNNGIAAQEQGVPRNL 106
+G+ T+ F N + PD ++F IAA GVP+ L
Sbjct: 388 FGSTTMIFSNVVGPDEEISFFGHRIAYIAASTFGVPQAL 426
>At1g26930.1 68414.m03283 kelch repeat-containing F-box family
protein contains Pfam:PF01344 Kelch motif, Pfam:PF00646
F-box domain
Length = 421
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 59 RVVPKVSEGYGAETVKFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGN 109
R K S G + + FG E++ Y Y TN+ A+ +PR L G+
Sbjct: 157 RYADKESLAVGTDLLVFGWEVSSYVIYRYSLLTNSWSTAKSMNMPRCLFGS 207
>At1g09070.1 68414.m01012 C2 domain-containing protein / src2-like
protein, putative similar to cold-regulated gene SRC2
[Glycine max] GI:2055230; contains Pfam profile PF00168:
C2 domain; identical to cDNA src2-like protein
GI:3426059
Length = 324
Score = 27.5 bits (58), Expect = 5.3
Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 6/55 (10%)
Query: 98 QEQGVPRNLGGNPPAVPVVAQGSFSWTSPE------GVPISVNYVADENGYQPTG 146
Q+ G P GG PP QG + P+ G P Y + GY P G
Sbjct: 204 QQAGYPAGTGGYPPPGAYPQQGGYPGYPPQQQGGYPGYPPQGPYGYPQQGYPPQG 258
>At5g49360.1 68418.m06108 glycosyl hydrolase family 3 protein
Length = 774
Score = 27.1 bits (57), Expect = 7.0
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 104 RNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVPEQIARAL 163
RNL N AVP + G + W S +++ ++D G A P + P+ I A
Sbjct: 74 RNLVNNAAAVPRLGIGGYEWWSE-----ALHGISDVGPGAKFGGAFPGATSFPQVITTAA 128
Query: 164 AY 165
++
Sbjct: 129 SF 130
>At4g39980.1 68417.m05662 2-dehydro-3-deoxyphosphoheptonate aldolase
1 / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase
1 / DAHP synthetase 1 (DHS1) nearly identical to
SP|P29965
Length = 525
Score = 27.1 bits (57), Expect = 7.0
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 107 GGNPPAVPVVAQGSFSWTSPEGV-PISVNYVADENGYQPTGNAIPTSPPVPEQIARALAY 165
GG+ P Q SF++ P SVN V + +P NA+ V + AL +
Sbjct: 16 GGDLSHRPSNRQSSFTFHPAVNTKPKSVNLVTAVHAAEPARNAVSVKESVASSSSGALKW 75
Query: 166 IAKNIPLKK 174
++ LKK
Sbjct: 76 TPESWKLKK 84
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 27.1 bits (57), Expect = 7.0
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 111 PAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVP 156
P+ P+ + SP G P S + V P+ + PTSP P
Sbjct: 430 PSPPITVPSPPTTPSPGGSPPSPSIVPSPPSTTPSPGSPPTSPTTP 475
>At5g06340.1 68418.m00710 diadenosine 5',5'''-P1,P4-tetraphosphate
hydrolase, putative similar to diadenosine
5',5'''-P1,P4-tetraphosphate hydrolase from [Lupinus
angustifolius] GI:1888557, [Hordeum vulgare subsp.
vulgare] GI:2564253; contains Pfam profile PF00293:
NUDIX domain
Length = 227
Score = 26.6 bits (56), Expect = 9.2
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 29 PYRYSTYRPFVSVTTPTPFLPIPISSVAPVRVVPKVSEGY 68
P ++S + F SV++P P + + ++ +P R V GY
Sbjct: 24 PVKFSCLKQF-SVSSPKPLVVLSVALSSPARTVESPPVGY 62
>At3g53080.1 68416.m05850 galactose-binding lectin family protein
contains Pfam domain PF02140: Galactose binding lectin
domain
Length = 155
Score = 26.6 bits (56), Expect = 9.2
Identities = 17/65 (26%), Positives = 27/65 (41%)
Query: 67 GYGAETVKFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSP 126
GY + F + NP G+ +F N G A + V +N G +V F +
Sbjct: 81 GYVITKINFADYGNPTGTCGHFRRGNCGARATMRIVKKNCLGKEKCHLLVTDEMFGPSKC 140
Query: 127 EGVPI 131
+G P+
Sbjct: 141 KGAPM 145
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.134 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,538,471
Number of Sequences: 28952
Number of extensions: 216585
Number of successful extensions: 434
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 407
Number of HSP's gapped (non-prelim): 33
length of query: 174
length of database: 12,070,560
effective HSP length: 76
effective length of query: 98
effective length of database: 9,870,208
effective search space: 967280384
effective search space used: 967280384
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 56 (26.6 bits)
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