Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000332-TA|BGIBMGA000332-PA|IPR000618|Insect cuticle
protein
(166 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27055| Best HMM Match : PWI (HMM E-Value=3.5e-08) 33 0.12
SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_8600| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_50113| Best HMM Match : NHL (HMM E-Value=2.3e-07) 28 3.4
SB_24634| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00054) 28 3.4
SB_35034| Best HMM Match : ENTH (HMM E-Value=0) 28 4.5
SB_5593| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_34086| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_25452| Best HMM Match : CTF_NFI (HMM E-Value=1.2) 27 7.8
SB_17295| Best HMM Match : Cu2_monooxygen (HMM E-Value=0.00028) 27 7.8
>SB_27055| Best HMM Match : PWI (HMM E-Value=3.5e-08)
Length = 677
Score = 33.1 bits (72), Expect = 0.12
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 48 ILPNRVATNEQAAETISYQNEILPDGSYSHGFETNNGISA----QAQGTPRDFGGNPPVV 103
I PN+ + + + I+PDG YS + + NGI+A Q P PP V
Sbjct: 375 IAPNKDVEEKHIPDIEWWDRVIIPDGKYSDNYPSLNGITALVEHPVQKHPPAEPKEPPTV 434
Query: 104 PVV 106
P++
Sbjct: 435 PIM 437
>SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1387
Score = 29.5 bits (63), Expect = 1.5
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 75 YSHGFETNNGISAQAQGTPRDFGGNPPVVPVVSQGSFAWTSPEGQPIVITYIADENGYQ 133
Y G+ T +Q+QG + GN P+ ++SQ A+ P G P V Y A NG Q
Sbjct: 142 YELGYPTMQTSQSQSQGYGLGYAGN-PMAQLMSQQVTAY-QPMGSPGVSAY-ASSNGGQ 197
>SB_8600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 450
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 66 QNEILPDGSYSHGFETNNGISAQAQGTPRDFGGNPPVVPVVSQGSFAWTSPEG 118
+ + P+G S G T NG ++ Q TP G P GS T+P G
Sbjct: 94 EGQTTPNGGGSEGQTTPNGGGSEGQTTPNGGGSEGQTTP-NGGGSEGQTTPNG 145
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 66 QNEILPDGSYSHGFETNNGISAQAQGTPRDFGGNPPVVPVVSQGSFAWTSPEG 118
+ + P+G S G T NG ++ Q TP G P GS T+P G
Sbjct: 83 EGQTKPNGGGSEGQTTPNGGGSEGQTTPNGGGSEGQTTP-NGGGSEGQTTPNG 134
>SB_50113| Best HMM Match : NHL (HMM E-Value=2.3e-07)
Length = 495
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 94 RDFGGNPPVVPVVSQGSFAWTSPEGQPIVITYIADE 129
RD N VPV S+G+ A TS G + +T + E
Sbjct: 317 RDLYTNKKAVPVASEGAIATTSITGSHLAMTAMQSE 352
>SB_24634| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00054)
Length = 1012
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 72 DGSYSHGFETNNGISAQAQGTPRDFGGNPPVVPVVSQGS-FAWTSPEGQPIVITYIADEN 130
D + + F NN + QG P F G P G+ A+ P P+ + +
Sbjct: 522 DPAVTRKFPVNNRFQQRRQGAPSGFTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 581
Query: 131 GYQ 133
GYQ
Sbjct: 582 GYQ 584
>SB_35034| Best HMM Match : ENTH (HMM E-Value=0)
Length = 455
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 104 PVVSQGSFAWTSPEGQPIVITYIADENGYQPQG 136
PV S GS W+S GQ I+ ++ + + P G
Sbjct: 278 PVSSAGSNPWSSTNGQSIIAPAVSISDPFDPFG 310
>SB_5593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
Query: 80 ETNNGISAQAQGTPRDFGGNPPVVPVVSQGSFAWTSPEGQPIVITYIADENGY 132
E N IS + G+ D+ +PV S G+ W G PI I N Y
Sbjct: 154 EMNETISMEVPGSLTDY------IPVYSPGTIVWGQSSGAPISINSSLIVNAY 200
>SB_34086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 890
Score = 27.1 bits (57), Expect = 7.8
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 71 PDGSYSHGFETNNGISAQA-QG---TPRDFGGNPPVVPVVSQGSFAWTSPEGQ 119
PD S S GF + S QG RD PVVP + QG + SPE Q
Sbjct: 694 PDDSDSEGFFMRDRASTLTDQGGVCDDRDDYSATPVVPSLGQGDYIDDSPEVQ 746
>SB_25452| Best HMM Match : CTF_NFI (HMM E-Value=1.2)
Length = 1056
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 91 GTPRDFGGNPPV-VPVVSQGSFAWTSPEGQP 120
GTPR F PP V + ++A T PEG P
Sbjct: 455 GTPRAFNPRPPTSVASIVSSTYA-TEPEGSP 484
>SB_17295| Best HMM Match : Cu2_monooxygen (HMM E-Value=0.00028)
Length = 616
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 58 QAAETISYQNEILPDGSYSHGFETNNGISAQAQGT-PRDFGGNP 100
QA SY + P+ +SH F+T G + Q G+ P +F +P
Sbjct: 297 QARNYHSYHDFNKPEQMHSHAFDTCTGPNKQRIGSLPDNFSNSP 340
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.311 0.131 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,306,076
Number of Sequences: 59808
Number of extensions: 177826
Number of successful extensions: 258
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 252
Number of HSP's gapped (non-prelim): 12
length of query: 166
length of database: 16,821,457
effective HSP length: 77
effective length of query: 89
effective length of database: 12,216,241
effective search space: 1087245449
effective search space used: 1087245449
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 57 (27.1 bits)
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