GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000332-TA|BGIBMGA000332-PA|IPR000618|Insect cuticle
protein
         (166 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    24   2.1  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   2.1  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    23   6.5  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    23   6.5  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   6.5  

>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)

Query: 106 VSQGSFAWTSPEGQPIVITYIAD-ENGY 132
           V QGS++   P+G    + Y AD  NG+
Sbjct: 48  VVQGSYSVVDPDGTKRTVDYTADPHNGF 75


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 3/63 (4%)

Query: 73  GSYSHGFETNNGISAQAQGTPRDFGGNPPVVPVVSQGSFAWTS---PEGQPIVITYIADE 129
           G   HG     G+    QG    F GN   +P +   +FA  S   P+   +  +Y A +
Sbjct: 151 GEELHGMVEQLGLIVINQGREYTFVGNGVALPSIVDVAFASPSIARPDTWVVSTSYTASD 210

Query: 130 NGY 132
           + Y
Sbjct: 211 HRY 213


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)

Query: 61  ETISYQNEILPDGSYSHGF 79
           ET ++   + PDG Y+ G+
Sbjct: 554 ETFTFNGYVYPDGMYAFGW 572


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)

Query: 61  ETISYQNEILPDGSYSHGF 79
           ET ++   + PDG Y+ G+
Sbjct: 554 ETFTFNGYVYPDGMYAFGW 572


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 9/14 (64%), Positives = 9/14 (64%)

Query: 92  TPRDFGGNPPVVPV 105
           TPRD   NP V PV
Sbjct: 378 TPRDISRNPDVEPV 391


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.311    0.131    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,147
Number of Sequences: 2123
Number of extensions: 5095
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 5
length of query: 166
length of database: 516,269
effective HSP length: 59
effective length of query: 107
effective length of database: 391,012
effective search space: 41838284
effective search space used: 41838284
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 45 (22.2 bits)