Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000332-TA|BGIBMGA000332-PA|IPR000618|Insect cuticle
protein
(166 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U49830-7|AAM98046.1| 774|Caenorhabditis elegans Neuronal igcam ... 28 3.9
U49830-6|AAK31481.1| 964|Caenorhabditis elegans Neuronal igcam ... 28 3.9
U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam ... 28 3.9
U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam ... 28 3.9
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 3.9
AL034393-13|CAA22317.1| 340|Caenorhabditis elegans Hypothetical... 27 5.1
U41264-1|AAA82421.1| 929|Caenorhabditis elegans Hypothetical pr... 27 6.8
AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ... 27 9.0
>U49830-7|AAM98046.1| 774|Caenorhabditis elegans Neuronal igcam
protein 6, isoform c protein.
Length = 774
Score = 27.9 bits (59), Expect = 3.9
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 61 ETISYQNEILPDGSYSHGFETNNGISAQAQGTPRDFGGNPPVVPVVSQGSFAWTSPEGQP 120
++I+ +N +LP+ Y + + P D+ P P + + W S + Q
Sbjct: 382 DSITVEN-LLPNTEYQFRVRSVESAAIGEPSIPSDWVKTAPGAPSETIDNLKWRSLDSQT 440
Query: 121 IVITYIADENGYQPQGD 137
+++ + E G + GD
Sbjct: 441 LLVEWQPIEIGQESSGD 457
>U49830-6|AAK31481.1| 964|Caenorhabditis elegans Neuronal igcam
protein 6, isoform a protein.
Length = 964
Score = 27.9 bits (59), Expect = 3.9
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 61 ETISYQNEILPDGSYSHGFETNNGISAQAQGTPRDFGGNPPVVPVVSQGSFAWTSPEGQP 120
++I+ +N +LP+ Y + + P D+ P P + + W S + Q
Sbjct: 572 DSITVEN-LLPNTEYQFRVRSVESAAIGEPSIPSDWVKTAPGAPSETIDNLKWRSLDSQT 630
Query: 121 IVITYIADENGYQPQGD 137
+++ + E G + GD
Sbjct: 631 LLVEWQPIEIGQESSGD 647
>U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam
protein 6, isoform b protein.
Length = 1227
Score = 27.9 bits (59), Expect = 3.9
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 61 ETISYQNEILPDGSYSHGFETNNGISAQAQGTPRDFGGNPPVVPVVSQGSFAWTSPEGQP 120
++I+ +N +LP+ Y + + P D+ P P + + W S + Q
Sbjct: 835 DSITVEN-LLPNTEYQFRVRSVESAAIGEPSIPSDWVKTAPGAPSETIDNLKWRSLDSQT 893
Query: 121 IVITYIADENGYQPQGD 137
+++ + E G + GD
Sbjct: 894 LLVEWQPIEIGQESSGD 910
>U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam
protein 6, isoform d protein.
Length = 1196
Score = 27.9 bits (59), Expect = 3.9
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 61 ETISYQNEILPDGSYSHGFETNNGISAQAQGTPRDFGGNPPVVPVVSQGSFAWTSPEGQP 120
++I+ +N +LP+ Y + + P D+ P P + + W S + Q
Sbjct: 804 DSITVEN-LLPNTEYQFRVRSVESAAIGEPSIPSDWVKTAPGAPSETIDNLKWRSLDSQT 862
Query: 121 IVITYIADENGYQPQGD 137
+++ + E G + GD
Sbjct: 863 LLVEWQPIEIGQESSGD 879
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 71 PDGSYSHGFETNNGISAQAQGTPRDFGGNPPVVPVVSQGSFA 112
P SH ++ + Q P+ FGG PP P G +A
Sbjct: 268 PPPMASHSSISSTPVQQQGFAPPQQFGGPPPSGPPSEYGGYA 309
>AL034393-13|CAA22317.1| 340|Caenorhabditis elegans Hypothetical
protein Y18D10A.17 protein.
Length = 340
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 65 YQNEILPDGSYSHGFETNNGISAQAQGTPRDFGGN 99
YQ++ G Y+ G+ NNG + PRD GN
Sbjct: 299 YQHQHQHRGGYNGGYRQNNGGYRRGGYAPRDNQGN 333
>U41264-1|AAA82421.1| 929|Caenorhabditis elegans Hypothetical
protein F10E7.8 protein.
Length = 929
Score = 27.1 bits (57), Expect = 6.8
Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 60 AETISYQNEILPDGSYSHGFETNNGISAQAQGTPRDFGGNPPVVPVVS----QGSFAWTS 115
A ++Y ++ + +YS ++ I+++ + +P PP +P + QGS T
Sbjct: 385 ARQMAYNDDSKDEDAYSEASSEDSTIASKKEDSPGASSSTPPSIPDTASNFRQGSGEQTP 444
Query: 116 PEGQPI 121
G P+
Sbjct: 445 RVGSPV 450
>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
protein Y20F4.4 protein.
Length = 1319
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 74 SYSHGFETNNGISAQAQGTPRDFGGNPPVVPVVSQGS 110
S +G NG +Q +G+P DF P P G+
Sbjct: 307 SSQNGNLFRNGTGSQHRGSPTDFKSKAPAKPPAQNGN 343
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.311 0.131 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,209,256
Number of Sequences: 27539
Number of extensions: 142298
Number of successful extensions: 174
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 171
Number of HSP's gapped (non-prelim): 8
length of query: 166
length of database: 12,573,161
effective HSP length: 76
effective length of query: 90
effective length of database: 10,480,197
effective search space: 943217730
effective search space used: 943217730
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 56 (26.6 bits)
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