Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000331-TA|BGIBMGA000331-PA|IPR000618|Insect cuticle
protein
(210 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0437 - 28986459-28986524,28986606-28986731,28986842-289869... 32 0.39
06_01_0743 - 5534743-5534985,5535075-5535172,5535286-5535429,553... 31 0.90
09_04_0706 + 19627024-19627380,19629945-19629976,19630657-196307... 29 2.1
08_02_0212 + 14342316-14342686,14343471-14343521,14345812-14346940 29 2.8
03_06_0656 - 35330109-35331011,35331154-35331360,35331455-353316... 29 3.7
02_05_0456 - 29187741-29187852,29187933-29187979 29 3.7
12_02_0304 + 17112677-17113195 28 6.4
01_06_1507 - 37838645-37839311,37839393-37839499,37839588-378396... 28 6.4
08_02_0985 + 23299996-23300208,23300355-23300520,23300790-233010... 27 8.4
02_04_0258 + 21339682-21339806,21340635-21340730,21340905-213409... 27 8.4
>02_05_0437 -
28986459-28986524,28986606-28986731,28986842-28986941,
28987583-28987660,28987857-28987937,28989488-28989624,
28989693-28989743,28989785-28989878,28990091-28990260
Length = 300
Score = 31.9 bits (69), Expect = 0.39
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 110 YRPLVYSSTVKPLAYRTQYVNDGSANIIRQDNDVDVNAYHFAYETDNGIAAEESGSV 166
Y+P+V T +P +Y YV A++ + D +Y+FA+ T GI A +SG +
Sbjct: 140 YKPVV-PQTSQPKSYNFAYVIAPLASLPLKYGD---GSYYFAFYTTGGIEARDSGKI 192
>06_01_0743 -
5534743-5534985,5535075-5535172,5535286-5535429,
5535594-5535643,5535733-5535787,5536595-5536686,
5536758-5536806,5536883-5537079,5537160-5537302,
5537625-5537777,5537848-5537896,5537974-5538071,
5538172-5538327,5538434-5538791,5538873-5538943,
5539134-5539217,5539307-5539468,5539534-5539677,
5539769-5540004,5540990-5541374
Length = 988
Score = 30.7 bits (66), Expect = 0.90
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Query: 138 RQDNDVDVNAYHFAYETDNGIAAEESGSVEPTVNGGGTRTRGFY--EYVGDDGLKYRVDY 195
R+DN +D +A E D+ ++ G P GGG RGF+ E D+ + D
Sbjct: 69 REDNFIDDSAIEDDEEDDD----DDDGGGRPKKKGGGGGVRGFFDEEAQVDEDEEEEDDG 124
Query: 196 TADENGFKPVGAHLP 210
+++ GA LP
Sbjct: 125 EGEDDFINDAGADLP 139
>09_04_0706 +
19627024-19627380,19629945-19629976,19630657-19630751,
19632116-19632281,19632881-19632938,19633014-19633061,
19633274-19633464,19633580-19633702,19635174-19635289,
19635841-19635924,19636009-19636259,19636438-19636647
Length = 576
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 157 GIAAEESGSVEPTVNGGGTRTRG 179
G AEE ++EP+++GGG R +G
Sbjct: 8 GWLAEEDNAIEPSLSGGGGRVQG 30
>08_02_0212 + 14342316-14342686,14343471-14343521,14345812-14346940
Length = 516
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 30 DGSYYPTNDGK--YINSFDGRYRSLLNRNSK 58
DGS +P DG Y N+FDG + +L++ SK
Sbjct: 250 DGSSHPVVDGPNVYYNAFDGNFDTLVSALSK 280
>03_06_0656 -
35330109-35331011,35331154-35331360,35331455-35331632,
35331726-35332221,35332889-35333033
Length = 642
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 16 QAQDDGKYRPEIYGDGSYYPTNDGKYIN--SFDGRYRSLLNRNSKYQSIYNAYQ 67
Q +G Y+P G+G Y N+G Y +DG+Y N N+ + +YN Q
Sbjct: 104 QGHYNGGYQPIHQGNGQY--QNNGNYHGDYGYDGQYAE--NYNNGQRQVYNGGQ 153
>02_05_0456 - 29187741-29187852,29187933-29187979
Length = 52
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 99 TVTYRPPVVSTYRPLVYSSTVKPLA 123
T+ RPP +TY+P Y S + LA
Sbjct: 2 TINTRPPEATTYKPRRYESAISDLA 26
>12_02_0304 + 17112677-17113195
Length = 172
Score = 27.9 bits (59), Expect = 6.4
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 59 YQSIYNAYQPYYAKALNQQLLTPFVKYGNGIEQTAEPSVATVTYR--PPVVSTYRPLVYS 116
+ S A QP N P + TAEP+ A V PPVV+ +PLV +
Sbjct: 18 FLSFAEAQQPQTPPRRNPPRAPPSPRRAPSPSVTAEPTPAPVIAPSPPPVVAPSQPLVVA 77
Query: 117 STVKP 121
T P
Sbjct: 78 PTQPP 82
>01_06_1507 - 37838645-37839311,37839393-37839499,37839588-37839663,
37839747-37839869,37840051-37840208,37840311-37840385,
37840466-37840506,37840594-37840670,37840755-37840883,
37840990-37841060,37841237-37841332,37841489-37841584,
37841681-37841953,37842871-37842957,37843101-37843178,
37843350-37843514,37843622-37843768,37843921-37843983,
37844082-37844201,37844352-37844543,37844672-37844748,
37845094-37845196,37845684-37845887
Length = 1074
Score = 27.9 bits (59), Expect = 6.4
Identities = 20/85 (23%), Positives = 34/85 (40%)
Query: 12 VSRSQAQDDGKYRPEIYGDGSYYPTNDGKYINSFDGRYRSLLNRNSKYQSIYNAYQPYYA 71
V + A G Y+ + G Y N G+Y + D + S +QS N+YQ + A
Sbjct: 927 VPPAYASSSGHYQNDRSGPSQYGRDNHGRYPYARDNHHDSRGRVPPYHQSGGNSYQSHSA 986
Query: 72 KALNQQLLTPFVKYGNGIEQTAEPS 96
+ Y G ++ +P+
Sbjct: 987 PSAGPGRYAQPPPYAGGYGRSYQPA 1011
>08_02_0985 +
23299996-23300208,23300355-23300520,23300790-23301043,
23301128-23301340,23301414-23301506,23301609-23301710,
23302852-23303229
Length = 472
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 37 NDGKYINSFDGRYRSLLNRNSKYQSIYNAYQPYYAKALNQQLLTPFVKYGNGI 89
+D YIN+F G+ L N K+Q +A + K + Q Y NG+
Sbjct: 198 DDEGYINNFMGKLSVRLAINQKHQPTRDACADVWQKGIRQTRYNLKKAYFNGV 250
>02_04_0258 +
21339682-21339806,21340635-21340730,21340905-21340980,
21341085-21341143,21341280-21341380,21341447-21341773,
21341861-21342021,21342100-21342303,21342735-21342966,
21343629-21344239
Length = 663
Score = 27.5 bits (58), Expect = 8.4
Identities = 28/118 (23%), Positives = 46/118 (38%), Gaps = 4/118 (3%)
Query: 11 LVSRSQAQDDGKYRPEIYGDGSYYPTNDGKYINSFDGRYRSLLNRNSKYQSIYNAYQPYY 70
L + DG + + Y D + DGK + SF + +S+ R+ + N+ Y
Sbjct: 378 LTDNQKIYADGLVK-KAYEDWMHVVEYDGKALLSFKQKKKSVTTRSDTAAAATNSPVSYG 436
Query: 71 AKALNQQLLTPFVKYGNGIEQTAEPSVATVTYRPPVVSTYRPLVYSSTVKPLAYRTQY 128
+ ++QL P T+E +T Y Y V S ++ P TQY
Sbjct: 437 SSNTHKQLSQPAKAGQTSTGTTSEADGSTSAYNGNQAGRY--AVNSQSI-PANVTTQY 491
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.134 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,924,774
Number of Sequences: 37544
Number of extensions: 311363
Number of successful extensions: 455
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 449
Number of HSP's gapped (non-prelim): 12
length of query: 210
length of database: 14,793,348
effective HSP length: 79
effective length of query: 131
effective length of database: 11,827,372
effective search space: 1549385732
effective search space used: 1549385732
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 58 (27.5 bits)
- SilkBase 1999-2023 -