GeneModel BLAST Result against celegans

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000331-TA|BGIBMGA000331-PA|IPR000618|Insect cuticle
protein
         (210 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016684-17|AAB66201.1|  463|Caenorhabditis elegans Hypothetical...    35   0.037
Z19555-5|CAA79614.1|  200|Caenorhabditis elegans Hypothetical pr...    31   0.80 
AF039052-2|AAF98629.1|  400|Caenorhabditis elegans Hypothetical ...    31   0.80 
U20864-7|AAK68357.1|  859|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U53153-2|AAQ91899.1|  422|Caenorhabditis elegans Hypothetical pr...    29   1.9  
U53153-1|AAC69039.4|  715|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z81076-10|CAB03059.1|  394|Caenorhabditis elegans Hypothetical p...    28   4.3  
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr...    28   4.3  
AL021566-3|CAA16499.1|  353|Caenorhabditis elegans Hypothetical ...    28   4.3  
AC024777-5|AAF60564.1|  506|Caenorhabditis elegans Hypothetical ...    28   4.3  
Z77670-2|CAB01250.1|  588|Caenorhabditis elegans Hypothetical pr...    28   5.7  
AJ512335-1|CAD54509.1|  588|Caenorhabditis elegans trehalase pro...    28   5.7  
U28991-10|AAK68306.2|  487|Caenorhabditis elegans Hypothetical p...    27   7.5  
U28991-9|AAU05576.1|  484|Caenorhabditis elegans Hypothetical pr...    27   7.5  
U61954-13|AAK29805.2|  352|Caenorhabditis elegans Him-three para...    27   9.9  

>AF016684-17|AAB66201.1|  463|Caenorhabditis elegans Hypothetical
           protein F45C12.1 protein.
          Length = 463

 Score = 35.1 bits (77), Expect = 0.037
 Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 6/107 (5%)

Query: 27  IYGDGSYYPTNDGKYINSF---DGRYRSLLNRNSKYQSIYNAYQPYYAKALNQQLLTPFV 83
           IYGD      NDG+Y++        Y SL  +  K   +       Y  AL+       +
Sbjct: 358 IYGD-IVVDVNDGRYLHKLFLLQYLYGSLKIQYMKADGLDFLSSLIYIAALDGTRPAVLI 416

Query: 84  KYGNGIEQTAEPSVATV--TYRPPVVSTYRPLVYSSTVKPLAYRTQY 128
           +    ++Q A P + T+  TY  PVV    P ++S   + L YR  Y
Sbjct: 417 RSNKYLKQAAIPRLLTIISTYPEPVVLYDNPALFSDNDQCLMYRVSY 463


>Z19555-5|CAA79614.1|  200|Caenorhabditis elegans Hypothetical
           protein F02A9.1 protein.
          Length = 200

 Score = 30.7 bits (66), Expect = 0.80
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 116 SSTVKPLAYRTQYVNDGSANIIRQDNDVDVNAYHFAYET--DNGIAAEESGSVEPTVNGG 173
           S++ +PL   T   N+GS + I  D   DVN   F +    +NG    E+ S E   +  
Sbjct: 56  SNSTEPLYEHTMIYNNGSLDEITIDVTEDVNIIEFTFTAPDENGTTIVETDSWELNFSET 115

Query: 174 GTRTRGFYEYVGD 186
              T G  + VG+
Sbjct: 116 YFHTIGSLQLVGN 128


>AF039052-2|AAF98629.1|  400|Caenorhabditis elegans Hypothetical
           protein T22D1.8 protein.
          Length = 400

 Score = 30.7 bits (66), Expect = 0.80
 Identities = 14/26 (53%), Positives = 18/26 (69%)

Query: 94  EPSVATVTYRPPVVSTYRPLVYSSTV 119
           +PSV+T T  PPV ST  P+  +STV
Sbjct: 314 DPSVSTTTVPPPVSSTSIPVTITSTV 339


>U20864-7|AAK68357.1|  859|Caenorhabditis elegans Hypothetical
           protein F32A5.2b protein.
          Length = 859

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 76  QQLLTPFVKYGNGIEQTAEPSVATVTYRPPVVSTYRPLVYSSTVKPLAYRTQYVNDGSAN 135
           + ++ P  K  N + +     +A  T RPPVV+T RP    S   P+  R  +++  ++N
Sbjct: 78  KNVIRPATKAPNRMRRPPPRKLAQ-TPRPPVVTTQRPAPPQSRPPPVTRRPTFISTTTSN 136


>U53153-2|AAQ91899.1|  422|Caenorhabditis elegans Hypothetical
           protein T19A5.3b protein.
          Length = 422

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 6/101 (5%)

Query: 79  LTPFVKYGN---GIEQTAEPSVATVTYRPPVVSTYRPLVYSSTVKPLAYRTQYVNDGSAN 135
           LTPF+       G   T  P   T  Y PP  ++ RP   ++T +     +  ++ G + 
Sbjct: 201 LTPFMNNARAKFGYGTTTLPPETTTIYVPPTTASRRPTTTTTTTEAPVEASFGISGGDSG 260

Query: 136 II-RQDNDVDVNAYHFAYET-DNGIAAE-ESGSVEPTVNGG 173
           II   D+ +  N       T D+GI    +SG + P  + G
Sbjct: 261 IIDTGDSGIVGNGESGLVGTGDSGIVGNGDSGVLGPPGDSG 301


>U53153-1|AAC69039.4|  715|Caenorhabditis elegans Hypothetical
           protein T19A5.3a protein.
          Length = 715

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 6/101 (5%)

Query: 79  LTPFVKYGN---GIEQTAEPSVATVTYRPPVVSTYRPLVYSSTVKPLAYRTQYVNDGSAN 135
           LTPF+       G   T  P   T  Y PP  ++ RP   ++T +     +  ++ G + 
Sbjct: 269 LTPFMNNARAKFGYGTTTLPPETTTIYVPPTTASRRPTTTTTTTEAPVEASFGISGGDSG 328

Query: 136 II-RQDNDVDVNAYHFAYET-DNGIAAE-ESGSVEPTVNGG 173
           II   D+ +  N       T D+GI    +SG + P  + G
Sbjct: 329 IIDTGDSGIVGNGESGLVGTGDSGIVGNGDSGVLGPPGDSG 369


>Z81076-10|CAB03059.1|  394|Caenorhabditis elegans Hypothetical
           protein F35C5.9 protein.
          Length = 394

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 6/47 (12%)

Query: 56  NSKYQSIYNAYQPYYAKALNQQLLTPFVKYGNGIEQTAEPSVATVTY 102
           NSK  ++YN Y           L  PFV+ G G +      V  +TY
Sbjct: 63  NSKNMNLYNVYNTI------SNLFNPFVQIGTGYDDPRSTRVGFITY 103


>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
           protein F32A5.2a protein.
          Length = 1000

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 76  QQLLTPFVKYGNGIEQTAEPSVATVTYRPPVVSTYRPLVYSSTVKPLAYRTQYVNDGSAN 135
           + ++ P  K  N + +     +A  T RPPVV+T RP    S   P+  R  +++  ++ 
Sbjct: 78  KNVIRPATKAPNRMRRPPPRKLAQ-TPRPPVVTTQRPAPPQSRPPPVTRRPTFISTTTSK 136

Query: 136 I 136
           +
Sbjct: 137 L 137


>AL021566-3|CAA16499.1|  353|Caenorhabditis elegans Hypothetical
           protein F08E10.3 protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 1/85 (1%)

Query: 41  YINSFDGRYRSLLNRNSKYQSIYNAYQPYYAKALNQQLLTPFVKYGNGIEQTAEPSVATV 100
           YIN F+ R  SLL    +  S  +    Y A  L    LTP +K+    +  A+     +
Sbjct: 126 YINLFESRASSLLANRFRISSNKSKILYYCAVMLPAVFLTPLLKFFPEDQDVAKLEALKI 185

Query: 101 TYRPPVVSTYRPLVYSSTVKPLAYR 125
            Y  P    +   V+ + +  +A R
Sbjct: 186 -YPCPTQEFFTTSVFIALIDQVAIR 209


>AC024777-5|AAF60564.1|  506|Caenorhabditis elegans Hypothetical
           protein Y42H9AR.1 protein.
          Length = 506

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 13/79 (16%)

Query: 58  KYQSIYNAYQP---YYAKALNQQLLTPFVKYGNGIEQTAEPSVATVTYRPPVVSTYRPLV 114
           +YQ  Y+  QP   YY +   QQ   P V           P  +   Y+PPV ++Y P  
Sbjct: 350 QYQQSYSQAQPPVDYYQQQQQQQAYQPPVN----------PPTSYQAYQPPVPTSYYPPA 399

Query: 115 YSSTVKPLAYRTQYVNDGS 133
            S+      Y+  Y +  S
Sbjct: 400 ASTASNSSGYQAPYYSPPS 418


>Z77670-2|CAB01250.1|  588|Caenorhabditis elegans Hypothetical
           protein W05E10.4 protein.
          Length = 588

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 14/46 (30%), Positives = 22/46 (47%)

Query: 123 AYRTQYVNDGSANIIRQDNDVDVNAYHFAYETDNGIAAEESGSVEP 168
           A+R +Y N  SAN+ + D    VN Y  A  T+  +   +    +P
Sbjct: 76  AWRAKYGNQSSANLNKSDVQAFVNQYFSAAGTELVVCTPDDWQEKP 121


>AJ512335-1|CAD54509.1|  588|Caenorhabditis elegans trehalase
           protein.
          Length = 588

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 14/46 (30%), Positives = 22/46 (47%)

Query: 123 AYRTQYVNDGSANIIRQDNDVDVNAYHFAYETDNGIAAEESGSVEP 168
           A+R +Y N  SAN+ + D    VN Y  A  T+  +   +    +P
Sbjct: 76  AWRAKYGNQSSANLNKSDVQAFVNQYFSAAGTELVVCTPDDWQEKP 121


>U28991-10|AAK68306.2|  487|Caenorhabditis elegans Hypothetical
           protein F08F8.10a protein.
          Length = 487

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 7/80 (8%)

Query: 44  SFDGRYRSLLNRNSKYQSI-YNAYQPYYAKALNQQLLTPFVKYGNGIEQTAEPSVATVTY 102
           S+ G   S LN ++ YQ+   N Y  + A A +   L+ F  +G    QT+  S  T  +
Sbjct: 175 SYPGYTGSTLNTSNVYQTYPENDYSFFPAPAPSS--LSSFNPFG----QTSPSSALTTAF 228

Query: 103 RPPVVSTYRPLVYSSTVKPL 122
             P  +TY     SST  P+
Sbjct: 229 GIPPPTTYSSHQQSSTYSPI 248


>U28991-9|AAU05576.1|  484|Caenorhabditis elegans Hypothetical
           protein F08F8.10b protein.
          Length = 484

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 7/80 (8%)

Query: 44  SFDGRYRSLLNRNSKYQSI-YNAYQPYYAKALNQQLLTPFVKYGNGIEQTAEPSVATVTY 102
           S+ G   S LN ++ YQ+   N Y  + A A +   L+ F  +G    QT+  S  T  +
Sbjct: 172 SYPGYTGSTLNTSNVYQTYPENDYSFFPAPAPSS--LSSFNPFG----QTSPSSALTTAF 225

Query: 103 RPPVVSTYRPLVYSSTVKPL 122
             P  +TY     SST  P+
Sbjct: 226 GIPPPTTYSSHQQSSTYSPI 245


>U61954-13|AAK29805.2|  352|Caenorhabditis elegans Him-three paralog
           protein 1 protein.
          Length = 352

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 7/85 (8%)

Query: 124 YRTQYVNDGSANIIRQDNDVDVNAYHFAYETDNGIAAEESGSVEPTVNGGGTRTRGFY-- 181
           +R +Y ND  +N  R D   D + +   Y   + I +   G + P  +            
Sbjct: 197 FRLEYTNDAPSNF-RIDGFEDSSTF---YTLPDDIQSATIGHLRPGCHAANMECWSMLMS 252

Query: 182 -EYVGDDGLKYRVDYTADENGFKPV 205
             Y  +  LK  +D  +D +GF PV
Sbjct: 253 DSYEAELTLKRHLDKVSDRHGFNPV 277


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.314    0.134    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,851,938
Number of Sequences: 27539
Number of extensions: 270124
Number of successful extensions: 527
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 521
Number of HSP's gapped (non-prelim): 15
length of query: 210
length of database: 12,573,161
effective HSP length: 78
effective length of query: 132
effective length of database: 10,425,119
effective search space: 1376115708
effective search space used: 1376115708
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 57 (27.1 bits)