GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000330-TA|BGIBMGA000330-PA|undefined
         (267 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   1.8  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    21   7.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.7  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 152 YPYIHKVIKGLVEKYVSFDGLHFGNEYDSSSNHFKKVYADKEIAVKC 198
           Y  I+ V++ L++KY +   +  G     +SN  K V AD  +  +C
Sbjct: 158 YFLIYAVLEMLLQKYKTVTYVMTGQLKAQNSNLLKSVCADLCLLSEC 204


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/21 (38%), Positives = 14/21 (66%)

Query: 152 YPYIHKVIKGLVEKYVSFDGL 172
           YP +H + + L E +V+ +GL
Sbjct: 76  YPSVHFISRKLGEDFVTCNGL 96


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/18 (55%), Positives = 11/18 (61%)

Query: 244 VANSLKNKLKLEYEVFVR 261
           VA   KN L+  YE FVR
Sbjct: 392 VAQIFKNLLENHYEEFVR 409


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.139    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,527
Number of Sequences: 317
Number of extensions: 1958
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 267
length of database: 114,650
effective HSP length: 56
effective length of query: 211
effective length of database: 96,898
effective search space: 20445478
effective search space used: 20445478
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 42 (21.0 bits)