GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000330-TA|BGIBMGA000330-PA|undefined
         (267 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069659-1|AAL39804.1|  535|Drosophila melanogaster LD43561p pro...    31   1.2  
AL009196-1|CAA15709.1|  535|Drosophila melanogaster EG:25E8.3 pr...    31   1.2  
AE014298-375|AAF45765.1|  535|Drosophila melanogaster CG3071-PA ...    31   1.2  
AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P...    29   6.7  

>AY069659-1|AAL39804.1|  535|Drosophila melanogaster LD43561p
           protein.
          Length = 535

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 11/110 (10%)

Query: 158 VIKGLVEKYVSFDGLHFGNEYDSSSNHFKKVYADKEIAVKCKYLTPNFKVNETSEFVTQY 217
           V+ G+V+  VS   +      DS  +H KK+ AD+      KY     + N T E     
Sbjct: 307 VVAGMVDGLVSIRRMMV----DSKPSHLKKIRADR----ARKYFVSTKRTNNTQEVDHTI 358

Query: 218 PPTVNLPNGEKFGSYY-SFRGTKILDTVANSLKNKLKLEYEVFVRVVDEV 266
              V  P  + +  +   F   K LD V N+   K++ + E+ V V+ ++
Sbjct: 359 KDHVKGPGLKSYDVHLRQFNHKKALDDVMNA--QKMQYQPELIVAVITDL 406


>AL009196-1|CAA15709.1|  535|Drosophila melanogaster EG:25E8.3
           protein.
          Length = 535

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 11/110 (10%)

Query: 158 VIKGLVEKYVSFDGLHFGNEYDSSSNHFKKVYADKEIAVKCKYLTPNFKVNETSEFVTQY 217
           V+ G+V+  VS   +      DS  +H KK+ AD+      KY     + N T E     
Sbjct: 307 VVAGMVDGLVSIRRMMV----DSKPSHLKKIRADR----ARKYFVSTKRTNNTQEVDHTI 358

Query: 218 PPTVNLPNGEKFGSYY-SFRGTKILDTVANSLKNKLKLEYEVFVRVVDEV 266
              V  P  + +  +   F   K LD V N+   K++ + E+ V V+ ++
Sbjct: 359 KDHVKGPGLKSYDVHLRQFNHKKALDDVMNA--QKMQYQPELIVAVITDL 406


>AE014298-375|AAF45765.1|  535|Drosophila melanogaster CG3071-PA
           protein.
          Length = 535

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 11/110 (10%)

Query: 158 VIKGLVEKYVSFDGLHFGNEYDSSSNHFKKVYADKEIAVKCKYLTPNFKVNETSEFVTQY 217
           V+ G+V+  VS   +      DS  +H KK+ AD+      KY     + N T E     
Sbjct: 307 VVAGMVDGLVSIRRMMV----DSKPSHLKKIRADR----ARKYFVSTKRTNNTQEVDHTI 358

Query: 218 PPTVNLPNGEKFGSYY-SFRGTKILDTVANSLKNKLKLEYEVFVRVVDEV 266
              V  P  + +  +   F   K LD V N+   K++ + E+ V V+ ++
Sbjct: 359 KDHVKGPGLKSYDVHLRQFNHKKALDDVMNA--QKMQYQPELIVAVITDL 406


>AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC
            protein.
          Length = 2528

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 12/57 (21%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 175  GNEYDSSSNHFKKVYADKEIA-VKCKYLTPNFKVNETSEFVTQYPPTVNLPNGEKFG 230
            G+   +S+N    + + K++  ++C +LTP   +    +   Q  P +++P  + +G
Sbjct: 2202 GHRSSTSTNAGLDLRSKKKLRLIRCHFLTPTSILQSAQQLQQQTRPAISMPKSKSYG 2258


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.319    0.139    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,774,122
Number of Sequences: 52641
Number of extensions: 351467
Number of successful extensions: 831
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 831
Number of HSP's gapped (non-prelim): 4
length of query: 267
length of database: 24,830,863
effective HSP length: 84
effective length of query: 183
effective length of database: 20,409,019
effective search space: 3734850477
effective search space used: 3734850477
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)