GeneModel BLAST Result against arabidopsis

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000329-TA|BGIBMGA000329-PA|IPR000618|Insect cuticle
protein
         (342 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g17750.1 68417.m02650 heat shock factor protein 1 (HSF1) / he...    31   1.5  
At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identica...    30   2.6  
At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identica...    30   2.6  
At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identica...    30   2.6  
At2g22720.3 68415.m02692 expressed protein                             30   2.6  
At2g22720.2 68415.m02691 expressed protein                             30   2.6  
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ...    28   7.9  
At1g11680.1 68414.m01341 obtusifoliol 14-demethylase (CYP51) ide...    28   7.9  

>At4g17750.1 68417.m02650 heat shock factor protein 1 (HSF1) / heat
           shock transcription factor 1 (HSTF1) identical to heat
           shock transcription factor 1 (HSF1) SP:P41151 from
           [Arabidopsis thaliana] ;contains Pfam profile: PF00447
           HSF-type DNA-binding domain
          Length = 495

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 5/102 (4%)

Query: 182 ENKILAEEAGKVENVGTENEGIKVKGFYEYVGPDGVTYRVDYTADENGFVADGAHIPNAS 241
           E+   A E+    +    ++G  VK  Y+ +  D + + +  T D+  F+ DG   PN  
Sbjct: 269 EDSTAATESNSHSHSLEASDGQIVK--YQPLRNDSMMWNMMKTDDKYPFL-DGFSSPN-- 323

Query: 242 RTSATTIHAFSQIKASHRQSSHSKPASQPQQDHRSRLTALPD 283
           + S  T+     I +   Q+  S P+ QP     S  T+LPD
Sbjct: 324 QVSGVTLQEVLPITSGQSQAYASVPSGQPLSYLPSTSTSLPD 365


>At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identical
           to auxin response factor 7 GI:4104929 from [Arabidopsis
           thaliana]
          Length = 1150

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 1/93 (1%)

Query: 249 HAFSQIKASHRQSSHSKPASQPQQDHRSRLTALPDPTARTYTASSRSIQAQSRLTVDFEQ 308
           H   Q++    Q  + + A+Q  Q  ++    L         ASS      S L   F+Q
Sbjct: 603 HKLQQLQVPQNQLYNGQQAAQQHQSQQASTHHLQPQLVSGSMASSVITPPSSSLNQSFQQ 662

Query: 309 HWRQSRSI-QAQFRLTGNFEQHWHLQANLSTDN 340
             +QS+ + QA   L  +  Q   ++ + S+ N
Sbjct: 663 QQQQSKQLQQAHHHLGASTSQSSVIETSKSSSN 695


>At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identical
           to auxin response factor 7 GI:4104929 from [Arabidopsis
           thaliana]
          Length = 1164

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 1/93 (1%)

Query: 249 HAFSQIKASHRQSSHSKPASQPQQDHRSRLTALPDPTARTYTASSRSIQAQSRLTVDFEQ 308
           H   Q++    Q  + + A+Q  Q  ++    L         ASS      S L   F+Q
Sbjct: 602 HKLQQLQVPQNQLYNGQQAAQQHQSQQASTHHLQPQLVSGSMASSVITPPSSSLNQSFQQ 661

Query: 309 HWRQSRSI-QAQFRLTGNFEQHWHLQANLSTDN 340
             +QS+ + QA   L  +  Q   ++ + S+ N
Sbjct: 662 QQQQSKQLQQAHHHLGASTSQSSVIETSKSSSN 694


>At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identical
           to auxin response factor 7 GI:4104929 from [Arabidopsis
           thaliana]
          Length = 1165

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 1/93 (1%)

Query: 249 HAFSQIKASHRQSSHSKPASQPQQDHRSRLTALPDPTARTYTASSRSIQAQSRLTVDFEQ 308
           H   Q++    Q  + + A+Q  Q  ++    L         ASS      S L   F+Q
Sbjct: 603 HKLQQLQVPQNQLYNGQQAAQQHQSQQASTHHLQPQLVSGSMASSVITPPSSSLNQSFQQ 662

Query: 309 HWRQSRSI-QAQFRLTGNFEQHWHLQANLSTDN 340
             +QS+ + QA   L  +  Q   ++ + S+ N
Sbjct: 663 QQQQSKQLQQAHHHLGASTSQSSVIETSKSSSN 695


>At2g22720.3 68415.m02692 expressed protein
          Length = 569

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 235 AHIPNASRTSATTIHAFSQIKASHRQSSHSKPASQPQQDHRSRLTALPDPTARTYTASSR 294
           AH P+       + +  S+  +S  Q +HS+P+S   + + SR          +  ASS 
Sbjct: 204 AHSPHREEKRPVSANGHSRPSSSGSQMNHSRPSSSGSKMNHSRPATSGSQMPNSRPASSG 263

Query: 295 SIQAQSR 301
           S Q QSR
Sbjct: 264 S-QMQSR 269


>At2g22720.2 68415.m02691 expressed protein
          Length = 672

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 235 AHIPNASRTSATTIHAFSQIKASHRQSSHSKPASQPQQDHRSRLTALPDPTARTYTASSR 294
           AH P+       + +  S+  +S  Q +HS+P+S   + + SR          +  ASS 
Sbjct: 307 AHSPHREEKRPVSANGHSRPSSSGSQMNHSRPSSSGSKMNHSRPATSGSQMPNSRPASSG 366

Query: 295 SIQAQSR 301
           S Q QSR
Sbjct: 367 S-QMQSR 372


>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
           contains Pfam domain, PF00096: Zinc finger, C2H2 type
          Length = 452

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 16/63 (25%), Positives = 25/63 (39%)

Query: 242 RTSATTIHAFSQIKASHRQSSHSKPASQPQQDHRSRLTALPDPTARTYTASSRSIQAQSR 301
           R S  T  AF    A     SH   + +   +  +R   +P+P        S  I++ S 
Sbjct: 177 RDSFITHRAFCDALAEENARSHHSQSKKQNPEILTRKNPVPNPVPAPVDTESAKIKSSST 236

Query: 302 LTV 304
           LT+
Sbjct: 237 LTI 239


>At1g11680.1 68414.m01341 obtusifoliol 14-demethylase (CYP51)
           identical to obtusifoliol 14-demethylase (GI:14624983)
           [Arabidopsis thaliana]
          Length = 488

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/57 (26%), Positives = 24/57 (42%)

Query: 14  ALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAYN 70
           ++ A  GK        + +T   F  +      DP  YDP R + GR     +GA++
Sbjct: 366 SVTARDGKTYDIPKGHIVATSPAFANRLPHIFKDPDTYDPERFSPGREEDKAAGAFS 422


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.313    0.130    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,187,270
Number of Sequences: 28952
Number of extensions: 272176
Number of successful extensions: 587
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 580
Number of HSP's gapped (non-prelim): 11
length of query: 342
length of database: 12,070,560
effective HSP length: 82
effective length of query: 260
effective length of database: 9,696,496
effective search space: 2521088960
effective search space used: 2521088960
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 60 (28.3 bits)