Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000328-TA|BGIBMGA000328-PA|IPR000618|Insect cuticle
protein
(159 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0099 - 41076056-41076059,41076135-41076175,41076937-410770... 28 3.1
05_07_0168 + 28122429-28122650,28122651-28122725,28123066-281231... 28 4.1
10_06_0114 - 10911713-10911724,10913642-10913772,10913869-109142... 27 5.4
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119... 27 7.1
06_03_0730 - 23948801-23949079,23949528-23949588,23949828-239499... 27 7.1
02_02_0059 - 6432945-6433115,6433975-6434061,6434585-6434787,643... 27 7.1
12_02_1007 - 25248653-25249078,25249956-25250021,25250108-252502... 27 9.4
12_01_0916 + 8959866-8959958,8960429-8960583,8960676-8961055,896... 27 9.4
>01_07_0099 -
41076056-41076059,41076135-41076175,41076937-41077041,
41077476-41077552,41078773-41078944,41079099-41079194,
41080268-41080465
Length = 230
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 59 SDTEVNPDGFSFGYETDNGISAQSSGSLKKV 89
S T+V P FS G T NG SAQ G+ +KV
Sbjct: 77 SGTQVLPRWFSTG--TSNGSSAQQEGATRKV 105
>05_07_0168 +
28122429-28122650,28122651-28122725,28123066-28123122,
28123248-28123411,28123672-28123806,28123908-28124010,
28124165-28124264,28124348-28124556
Length = 354
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 65 PDGFSFGYETDNGISAQSSGSLKKVDNIDVLAIQGQYEYSAPDGTPVKFTYTAD 118
P FSFGY T +S S ++ ++ +D L Q E G + F D
Sbjct: 201 PFSFSFGYHTYLSVSDISEVRIEGLETLDYLDNLSQRERFTEQGDAITFESEVD 254
>10_06_0114 -
10911713-10911724,10913642-10913772,10913869-10914229,
10914339-10915081,10918916-10918964,10919063-10919334,
10919426-10919519,10919618-10920000,10920504-10920575,
10920656-10920778,10920875-10921048,10921115-10921579,
10921662-10921839
Length = 1018
Score = 27.5 bits (58), Expect = 5.4
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Query: 73 ETDNGISAQSSGSLKKVDNIDVLAIQGQYEYSAPDGTPVKFTYTADENGYQPQSELLPVA 132
+ D+G++A+ DN+D L +Q Q P + F YT D + + + +
Sbjct: 312 DEDHGVTAEIHDI---ADNVDELDMQFQQSSQGPRHMQLYFYYTKDADAL---AHRVRRS 365
Query: 133 PPMPEAIRRAIDYILAHPPKTETVKKL 159
P + + R I ILA P +T ++
Sbjct: 366 PDLDINLVRVILCILAQNPYVQTFSRV 392
>11_06_0458 + 23808402-23808469,23808800-23809684,23810011-23811961,
23812210-23812285,23813064-23813072,23813243-23813335,
23813578-23813581,23813780-23814703,23814926-23815909,
23816073-23816118,23816376-23816951,23817253-23817798,
23817820-23818416
Length = 2252
Score = 27.1 bits (57), Expect = 7.1
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 118 DENGYQPQSELLPVAPPMPEAIRRAIDYILAHPPKTETV 156
+E Y P S L+ A + AIRR + A PP +
Sbjct: 1869 EEKMYVPNSRLMSCASLLSAAIRRGVAGCRASPPSASAI 1907
>06_03_0730 -
23948801-23949079,23949528-23949588,23949828-23949954,
23950449-23950485,23950987-23951061,23951489-23951598,
23952700-23952754,23952833-23952949,23953201-23953355,
23953577-23953634,23954239-23954460
Length = 431
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 105 APDGTPVKFTYTADENGYQPQSELLPVAPPMPEAI 139
A G Y +D G P+S L P PP P+ +
Sbjct: 378 ATTGATEGSNYRSDHFGASPRSALAPPPPPSPDLV 412
>02_02_0059 -
6432945-6433115,6433975-6434061,6434585-6434787,
6435281-6435392,6435473-6435517,6435622-6435726,
6435946-6435996,6436026-6436103,6437258-6437313,
6437784-6437853,6438288-6438392,6438525-6438637,
6439354-6439534,6439635-6440390
Length = 710
Score = 27.1 bits (57), Expect = 7.1
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 118 DENGYQPQSELLPVAPPMPEAIRRAIDYILAHPP 151
D +G+ P++++ P PP+ + + DY A PP
Sbjct: 173 DSHGWHPEADVPPPPPPLEPPVPSSSDY-HAKPP 205
>12_02_1007 -
25248653-25249078,25249956-25250021,25250108-25250260,
25250961-25251336,25252001-25252143
Length = 387
Score = 26.6 bits (56), Expect = 9.4
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 96 AIQGQYEYSAPDGTPVKFTYTADENGYQPQSELLPVAPPMPEAIRRAIDYILAHPP 151
++Q Q + + G+P Y A PQS + P PP P + +LA PP
Sbjct: 262 SLQHQLKAMSVVGSPPALLYPA---AVHPQSYMHPPPPPPPVTMPMHPGMVLAAPP 314
>12_01_0916 +
8959866-8959958,8960429-8960583,8960676-8961055,
8961142-8962122,8962699-8962829
Length = 579
Score = 26.6 bits (56), Expect = 9.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 96 AIQGQYEYSAPDGTPVKFTYTAD 118
+I G Y PD P+ F YTAD
Sbjct: 417 SIDGVYTRDFPDTPPIVFDYTAD 439
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.134 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,541,104
Number of Sequences: 37544
Number of extensions: 172417
Number of successful extensions: 326
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 321
Number of HSP's gapped (non-prelim): 9
length of query: 159
length of database: 14,793,348
effective HSP length: 76
effective length of query: 83
effective length of database: 11,940,004
effective search space: 991020332
effective search space used: 991020332
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 56 (26.6 bits)
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