Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000328-TA|BGIBMGA000328-PA|IPR000618|Insect cuticle
protein
(159 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14808| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.77
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 29 2.4
SB_38046| Best HMM Match : Homoserine_dh (HMM E-Value=0) 27 5.5
SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_45717| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_22906| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_7505| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_1170| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_226| Best HMM Match : Tektin (HMM E-Value=0) 27 9.5
>SB_14808| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 30.3 bits (65), Expect = 0.77
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 122 YQPQSELLPVAPPMPEAIRRAIDYILAHPPKTETVKK 158
Y+ QS LP PP P A+ +D++ AH P + T+++
Sbjct: 54 YRHQSSSLPTLPP-PVALIN-LDFVAAHSPHSPTIRR 88
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Query: 49 GSEADAVILRSDTEVNPDGFSFGYETDNGISAQSSGSLKKVDNIDVLAIQGQYEYS 104
G + D D V + + GYE DNG+ +G+ DN G Y+YS
Sbjct: 22 GDDVDDAGDEDDNSVGDEDDNVGYEGDNGVGGDDNGAGGDDDN-----SVGDYDYS 72
>SB_38046| Best HMM Match : Homoserine_dh (HMM E-Value=0)
Length = 537
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 97 IQGQYEYSAPDGTPVKFTYTADENGYQPQSELLPVA 132
+QG Y + DG PV T A+ G Q E +P +
Sbjct: 73 LQG-YLFQVKDGKPVNLTEAAESKGVVKQLEAIPAS 107
>SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2839
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 51 EADAVILRSDTEVNPDGFSFGYETDN-GISAQSSGSLK 87
E D +++ + T+V + Y TD I QS G LK
Sbjct: 1878 EQDVIVMHAQTQVESTPIEYDYNTDEYEIKRQSVGKLK 1915
>SB_45717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 107 DGTPVKFTYTADENGYQPQSELLPVAPPMPEAIR 140
DG +KF+ DEN Y+ L V P P+ ++
Sbjct: 269 DGQEIKFSVFIDENEYRSICLNLQVGPSEPDVLK 302
>SB_22906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 27.1 bits (57), Expect = 7.2
Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Query: 66 DGFSFGYETDNGISAQSSGSLKKVDNIDVLAIQGQYEYSAPDGTPVKFTYTADENGYQPQ 125
DG+ +GY G +K +DV I Y+ A G P + + G
Sbjct: 30 DGYGYGYGYGYNEKEVKIGQREKPSQLDVQRISQMYKCGAVGGIPGTGSGSGGSGGTSSS 89
Query: 126 SELLPVAP 133
S+ P +P
Sbjct: 90 SD-TPTSP 96
>SB_7505| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 584
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 70 FGYETDNGISAQSSGSLKKVDNIDVLAIQGQYEYSAPDGTPVK 112
+G + D+ S+G VD+ DVL +QG + P+ P++
Sbjct: 29 YGNDDDDDDDDDSNGD-DDVDDEDVLQVQGNFAKHCPEIDPIR 70
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 27.1 bits (57), Expect = 7.2
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 104 SAPDGTPVKFTYTADENGYQPQSELLPVAPPMPEAIRRAIDYILAHPPKTET 155
+AP+ T TA E P++ L P A PEA A ++ P+T T
Sbjct: 477 TAPETTTASLVTTAPETTTAPEATLAPEATTAPEA---ATASLVTTAPETTT 525
>SB_1170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 561
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 110 PVKFTYTADENGYQPQSELLPVAPPMPEAIRRAIDYILAHPPKTET 155
P + TA GY+PQ++L+ + E + + +++ L H + E+
Sbjct: 309 PGSYEVTASATGYEPQTKLVEL---RGEEVEKEVNFTLRHSNELES 351
>SB_226| Best HMM Match : Tektin (HMM E-Value=0)
Length = 534
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 103 YSAPDGTPVKFTYTADENGYQPQSELLPVAPPMPEAIRRAIDY 145
Y P G P + TYTA G +P + + PM ++ R+ ++
Sbjct: 22 YLRPTGGPYETTYTASFQGIRPHTTPYSIR-PMTMSMSRSYEF 63
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.134 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,035,304
Number of Sequences: 59808
Number of extensions: 186648
Number of successful extensions: 347
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 340
Number of HSP's gapped (non-prelim): 13
length of query: 159
length of database: 16,821,457
effective HSP length: 77
effective length of query: 82
effective length of database: 12,216,241
effective search space: 1001731762
effective search space used: 1001731762
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 56 (26.6 bits)
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